HHsearch results for GI: 254780281 and protein with PDBid: 1nm3_A
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.36 E-value=7.7e-06 Score=54.78 Aligned_cols=142 Identities=17% Similarity=0.183 Sum_probs=85.3
Q ss_pred CCCCCCEEEECCCCC---EECHHH-HCCCEEEEEEECC-CCCCCCHHH-HHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 666787079829997---967788-4996799996047-776544688-8877655543024433305887651433333
Q gi|254780281|r 33 RRFNSDVHLVAQDGT---DFSLSS-LYIKPSIVFFGFT-NCSAVCPTT-LSRLDRLLKQVDPTGTLLNAYFITVDPKRDT 106 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~---~~~~~~-~~Gk~~li~F~~T-~Cpd~Cp~~-l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt 106 (201)
....|+|+|..+.|. .++++| |+||+++|+|.-- .=| .|..+ ++.....++.+.+.+. -.++.+|+ |+
T Consensus 6 Gd~~Pd~tl~~~~~~~~~~vsl~d~f~~K~vvL~f~PgAFTp-~Ct~~~~~~~~~~~~~~~~~g~-~~v~~~s~----~D 79 (241)
T 1nm3_A 6 GKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTP-TCSSSHLPRYNELAPVFKKYGV-DDILVVSV----ND 79 (241)
T ss_dssp TSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCH-HHHHTHHHHHHHHHHHHHHTTC-CEEEEEES----SC
T ss_pred CCCCCCEEEEEECCCCCEEEEHHHHHCCCEEEEEEECCCCCC-CCCCCCCCHHHHHHHHHHHCCC-CEEEEEEC----CC
T ss_conf 878897699977599855853899849983999983688896-5676615547776688885278-61899962----99
Q ss_pred HHHHHHHHHH-CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC-----C
Q ss_conf 0577777531-368642245898898988886090886225655677775258742069998589829998578-----9
Q gi|254780281|r 107 PEVMKKFVQR-FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY-----K 180 (201)
Q Consensus 107 ~e~l~~y~~~-~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~-----~ 180 (201)
+.+++.|.+. ...++.+|..... .+++++|+.+......-. ..-.-..++|| +|.+...+-. +
T Consensus 80 ~~v~~aw~~~~~~~~~~llsD~~~---~~~~~~g~~~~~~~~g~g-------~rs~R~a~iId-dG~I~~~~ve~~~~g~ 148 (241)
T 1nm3_A 80 TFVMNAWKEDEKSENISFIPDGNG---EFTEGMGMLVGKEDLGFG-------KRSWRYSMLVK-NGVVEKMFIEPNEPGD 148 (241)
T ss_dssp HHHHHHHHHHTTCTTSEEEECTTS---HHHHHTTCEEECTTTTCC-------EEECCEEEEEE-TTEEEEEEECCSCSSC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCC---HHHHHCCCEECCCCCCCC-------CCCEEEEEEEE-CCEEEEEEECCCCCCC
T ss_conf 899999999758983666048861---788856876656447686-------42069999999-9999999976689999
Q ss_pred ----CCHHHHHHHHH
Q ss_conf ----88899999999
Q gi|254780281|r 181 ----DDSDSAIEKIN 191 (201)
Q Consensus 181 ----~~~~~i~~~i~ 191 (201)
.+++.+++.|+
T Consensus 149 ~~~~s~~~~~l~~l~ 163 (241)
T 1nm3_A 149 PFKVSDADTMLKYLA 163 (241)
T ss_dssp CCSSSSHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 752246899998641