HHsearch results for GI: 254780281 and protein with PDBid: 1q98_A
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.62 E-value=7.2e-15 Score=109.25 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=94.0
Q ss_pred CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 666667870798299979677884996799996047-7765446888877655543024433305887651433333057
Q gi|254780281|r 31 GNRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 31 ~~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
.....+|+|+|.|.+|+.+++++|+||+++++|+.. +|| .|..++..+++.++++. ++.++.||+ |+++.
T Consensus 18 ~vG~~aPdF~L~~~~g~~vsLsd~~Gk~vVl~f~p~~~tp-~C~~e~~~l~~~~~~~~----~~~v~~IS~----d~~~~ 88 (165)
T 1q98_A 18 QVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTG-VCATSVRKFNQQAAKLS----NTIVLCISA----DLPFA 88 (165)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSS-CCCHHHHHHHHHHHHST----TEEEEEEES----SCHHH
T ss_pred CCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEECCCCCCC-CCCHHHHHHHHHHHHHC----CCEEEEEEC----CCHHH
T ss_conf 8969998708788999998418989987999977646767-54566898999999853----987999817----86899
Q ss_pred HHHHHHHCCCC-EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf 77775313686-422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r 110 MKKFVQRFSDR-IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI 177 (201)
Q Consensus 110 l~~y~~~~~~~-~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~ 177 (201)
+++|.+..+.. +..+....+ ..+.+.||+......... + -...+||||++|+++-..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g--------~-~~r~~fvID~~G~I~y~~ 146 (165)
T 1q98_A 89 QARFCGAEGIENAKTVSTFRN--HALHSQLGVDIQTGPLAG--------L-TSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp HTTCTTTTTCTTEEEEECTTC--THHHHHTTCEECSSTTTT--------S-BCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHCCCCCEECCCCCC--CHHHHHHCEECCCCCCCC--------E-EEEEEEEECCCCEEEEEE
T ss_conf 999999709876277155445--569996173413564267--------1-677899998999899999