HHsearch results for GI: 254780281 and protein with PDBid: 1q98_A

>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.62  E-value=7.2e-15  Score=109.25  Aligned_cols=127  Identities=13%  Similarity=0.154  Sum_probs=94.0

Q ss_pred             CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf             666667870798299979677884996799996047-7765446888877655543024433305887651433333057
Q gi|254780281|r   31 GNRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV  109 (201)
Q Consensus        31 ~~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~  109 (201)
                      .....+|+|+|.|.+|+.+++++|+||+++++|+.. +|| .|..++..+++.++++.    ++.++.||+    |+++.
T Consensus        18 ~vG~~aPdF~L~~~~g~~vsLsd~~Gk~vVl~f~p~~~tp-~C~~e~~~l~~~~~~~~----~~~v~~IS~----d~~~~   88 (165)
T 1q98_A           18 QVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTG-VCATSVRKFNQQAAKLS----NTIVLCISA----DLPFA   88 (165)
T ss_dssp             CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSS-CCCHHHHHHHHHHHHST----TEEEEEEES----SCHHH
T ss_pred             CCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEECCCCCCC-CCCHHHHHHHHHHHHHC----CCEEEEEEC----CCHHH
T ss_conf             8969998708788999998418989987999977646767-54566898999999853----987999817----86899


Q ss_pred             HHHHHHHCCCC-EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf             77775313686-422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r  110 MKKFVQRFSDR-IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI  177 (201)
Q Consensus       110 l~~y~~~~~~~-~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~  177 (201)
                      +++|.+..+.. +..+....+  ..+.+.||+.........        + -...+||||++|+++-..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g--------~-~~r~~fvID~~G~I~y~~  146 (165)
T 1q98_A           89 QARFCGAEGIENAKTVSTFRN--HALHSQLGVDIQTGPLAG--------L-TSRAVIVLDEQNNVLHSQ  146 (165)
T ss_dssp             HTTCTTTTTCTTEEEEECTTC--THHHHHTTCEECSSTTTT--------S-BCCEEEEECTTSBEEEEE
T ss_pred             HHHHHHHHCCCCCEECCCCCC--CHHHHHHCEECCCCCCCC--------E-EEEEEEEECCCCEEEEEE
T ss_conf             999999709876277155445--569996173413564267--------1-677899998999899999