HHsearch results for GI: 254780281 and protein with PDBid: 1wmj_A
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.86 E-value=0.00018 Score=46.53 Aligned_cols=91 Identities=18% Similarity=0.181 Sum_probs=57.3
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 84996799996047776544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
.-.||+++|.|+.+||+ .|-...+.+.++.+++.. +.++.+.+| +.++
T Consensus 33 ~~~~k~vvV~F~a~wC~-~C~~~~p~~~~l~~~~~~----~~~~~~~~d---~~~~------------------------ 80 (130)
T 1wmj_A 33 KEAGKVVIIDFTASWCG-PCRFIAPVFAEYAKKFPG----AVFLKVDVD---ELKE------------------------ 80 (130)
T ss_dssp HTTTCBCBEECCSSSCS-CSSSSHHHHHHHHHHCTT----BCCEECCTT---TSGG------------------------
T ss_pred HHCCCEEEEEEECCCCC-CHHHHCCHHHHHHHHCCC----CCEEEEECC---CCHH------------------------
T ss_conf 63299799999689980-725531247766553477----630477422---1022------------------------
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++.. .++ +++-++|+.+..+.+ .+++++.+.|++.+..
T Consensus 81 -l~~~~~I~~------------------~PT-~~~~~~G~~v~~~~G-~~~~~l~~~i~k~~~~ 123 (130)
T 1wmj_A 81 -VAEKYNVEA------------------MPT-FLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -GHHHHTCCS------------------SCC-CCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -HHHHCCCCC------------------CCE-EEEEECCEEEEEEEC-CCHHHHHHHHHHHCCC
T ss_conf -254124166------------------687-999989999999959-6999999999997399