HHsearch results for GI: 254780281 and protein with PDBid: 1xfl_A
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.94 E-value=4.9e-05 Score=49.92 Aligned_cols=88 Identities=16% Similarity=0.215 Sum_probs=59.2
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+|+.+||+ .|....+.+.++.++++ .+.++.|.+| +.+ .
T Consensus 36 ~~~k~vvV~F~a~wC~-~Ck~~~p~~~~l~~~~~----~~~f~~i~~d---~~~-------------------------~ 82 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCG-PCRFIAPFFADLAKKLP----NVLFLKVDTD---ELK-------------------------S 82 (124)
T ss_dssp HTTCEEEEEEECTTCH-HHHHHHHHHHHHHHHCS----SEEEEEEETT---TSH-------------------------H
T ss_pred HCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CEEEEEEECC---CCH-------------------------H
T ss_conf 2699899999889898-89966556623555278----1689998314---488-------------------------7
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+++.|++.. .+++.++ .+|+.+..+.+ .+++++.+.|++-|
T Consensus 83 l~~~~~V~~------------------~PT~~~~-k~G~~v~~~~G-~~~~~L~~~I~k~L 123 (124)
T 1xfl_A 83 VASDWAIQA------------------MPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHC
T ss_conf 999749987------------------8989999-89999999939-59999999999961