HHsearch results for GI: 254780281 and protein with PDBid: 1xfl_A

>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.94  E-value=4.9e-05  Score=49.92  Aligned_cols=88  Identities=16%  Similarity=0.215  Sum_probs=59.2

Q ss_pred             HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf             49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r   54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR  133 (201)
Q Consensus        54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~  133 (201)
                      -.||+++|+|+.+||+ .|....+.+.++.++++    .+.++.|.+|   +.+                         .
T Consensus        36 ~~~k~vvV~F~a~wC~-~Ck~~~p~~~~l~~~~~----~~~f~~i~~d---~~~-------------------------~   82 (124)
T 1xfl_A           36 ESKTLVVVDFTASWCG-PCRFIAPFFADLAKKLP----NVLFLKVDTD---ELK-------------------------S   82 (124)
T ss_dssp             HTTCEEEEEEECTTCH-HHHHHHHHHHHHHHHCS----SEEEEEEETT---TSH-------------------------H
T ss_pred             HCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CEEEEEEECC---CCH-------------------------H
T ss_conf             2699899999889898-89966556623555278----1689998314---488-------------------------7


Q ss_pred             HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             8886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r  134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI  194 (201)
Q Consensus       134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll  194 (201)
                      +++.|++..                  .+++.++ .+|+.+..+.+ .+++++.+.|++-|
T Consensus        83 l~~~~~V~~------------------~PT~~~~-k~G~~v~~~~G-~~~~~L~~~I~k~L  123 (124)
T 1xfl_A           83 VASDWAIQA------------------MPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHL  123 (124)
T ss_dssp             HHHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred             HHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHC
T ss_conf             999749987------------------8989999-89999999939-59999999999961