HHsearch results for GI: 254780281 and protein with PDBid: 2h30_A
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.68 E-value=6.5e-17 Score=121.61 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=100.4
Q ss_pred CEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC---CCCCCHHHHHHHH
Q ss_conf 7079829997967788499679999604777654468888776555430244333058876514---3333305777775
Q gi|254780281|r 38 DVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD---PKRDTPEVMKKFV 114 (201)
Q Consensus 38 ~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD---P~rDt~e~l~~y~ 114 (201)
.+.|.+.+|+.+++++++||++||+||+|||| .|..+++.|.++++++... .+.+++|+++ .+.+..+..+.|.
T Consensus 20 ~~~l~~~d~~~~~l~~~kgK~vvl~Fwa~wC~-~C~~e~p~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~ 96 (164)
T 2h30_A 20 MSTMKTADNRPASVYLKKDKPTLIKFWASWCP-LCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYA 96 (164)
T ss_dssp HTTCEETTSSBGGGGCCTTSCEEEEECCTTCH-HHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHT
T ss_pred CCEEECCCCCEEEHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCCC--EEEEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 65679899999648880988799999989898-6999999999999874354--05899986521442145788887766
Q ss_pred HHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 31368642245898898988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 115 QRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 115 ~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
......|..+..... .+++.||+. ..+.+|+||++|+++..+.+..+.+++.+.|+++.
T Consensus 97 ~~~~~~~p~~~D~~~---~l~~~~gi~------------------~~P~~~lid~~G~I~~~~~G~~~~~~i~~~l~~~~ 155 (164)
T 2h30_A 97 GLNYPKLPVVTDNGG---TIAQNLNIS------------------VYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TSCCTTSCEEECTTC---HHHHHTTCC------------------SSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HHCCCCCCEECCCHH---HHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 502555414206336---799984998------------------03889999799979999968999999999999999
Q ss_pred H
Q ss_conf 5
Q gi|254780281|r 195 T 195 (201)
Q Consensus 195 ~ 195 (201)
+
T Consensus 156 ~ 156 (164)
T 2h30_A 156 A 156 (164)
T ss_dssp C
T ss_pred H
T ss_conf 9