HHsearch results for GI: 254780281 and protein with PDBid: 2qgv_A
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Shigella flexneri 2a str} PDB: 2hfd_A
Probab=97.95 E-value=2.9e-05 Score=51.33 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=66.0
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
++++++++|+..||| .|....+.+.++.+++.. ..+ ..+.||.+ .-..+
T Consensus 35 ~~~vVl~~f~a~~C~-~C~~~~pil~ela~~~~~--~~~--~~a~VD~d--------------------------~~~~l 83 (140)
T 2qgv_A 35 PDGVVLLSSDPKRTP-EVSDNPVMIGELLHEFPD--YTW--QVAIADLE--------------------------QSEAI 83 (140)
T ss_dssp SSEEEEECCCTTTCT-TTTHHHHHHHHHHTTCTT--SCC--EEEECCHH--------------------------HHHHH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC--CCE--EEEEECCC--------------------------CCHHH
T ss_conf 883699874089897-699999999999997799--826--99998897--------------------------77999
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|++. ..+++.++ .+|+.+..+.+..+.+++.+.|+.++...
T Consensus 84 a~~~~V~------------------~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~l~~ll~~~ 127 (140)
T 2qgv_A 84 GDRFGAF------------------RFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp HHHHTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred HHHHCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCCH
T ss_conf 9995991------------------17827999-99969687758999999999999986501