HHsearch results for GI: 254780281 and protein with PDBid: 2qsi_A
>2qsi_A Putative hydrogenase expression/formation protein HUPG; MCSG, PSI-2, SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris CGA009}
Probab=97.35 E-value=0.0021 Score=40.11 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=64.3
Q ss_pred CCCEEEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 99679999604777--6544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 55 YIKPSIVFFGFTNC--SAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 55 ~Gk~~li~F~~T~C--pd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
.+++++++||..+| | .|....+.+.++.++++. ++.++.|.+| .. .
T Consensus 32 ~~~~~V~ff~~~~cr~~-~c~~~~pvl~ela~~~~~---~v~~~~vd~~---~~-------------------------~ 79 (137)
T 2qsi_A 32 SGKIVVLFFRGDAVRFP-EAADLAVVLPELINAFPG---RLVAAEVAAE---AE-------------------------R 79 (137)
T ss_dssp SSSEEEEEECCCTTTCT-THHHHHHHHHHHHHTSTT---TEEEEEECGG---GH-------------------------H
T ss_pred CCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHCCC---CEEEEEEECC---CC-------------------------H
T ss_conf 89838999960776680-077899999999997689---7799999752---58-------------------------9
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.+++.|+|.. .++++++ .+|+.++.+.+..+.+++.+.|+++|..
T Consensus 80 ~l~~~~~V~~------------------~Pt~~~f-~~Gk~v~~~~G~~~~~~l~~~i~~~L~~ 124 (137)
T 2qsi_A 80 GLMARFGVAV------------------CPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp HHHHHHTCCS------------------SSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9999719751------------------7879999-9998955573789999999999998725