HHsearch results for GI: 254780281 and protein with PDBid: 2rli_A
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.98 E-value=3.1e-31 Score=208.03 Aligned_cols=161 Identities=26% Similarity=0.551 Sum_probs=145.8
Q ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 7870798299979677884996799996047776544688887765554302443--33058876514333330577777
Q gi|254780281|r 36 NSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTG--TLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 36 ~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~--~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
.+||+|+|++|+++++++|+|||+||+|||||||++||..+..|.++++++...+ ..+.++.++.++++|+++....+
T Consensus 6 ~gDF~L~d~~G~~vsl~dl~GK~vvl~F~~t~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (171)
T 2rli_A 6 QGDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARY 85 (171)
T ss_dssp CSCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHH
T ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 58969984994997789969998999998379998560667878999998621135675248764023346748888777
Q ss_pred HHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 53136864224589889898888609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 114 VQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 114 ~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
...+..+|.++++.......+++.|+++....... ...+|.++|++.+|||||+|+++++|+...++++++++|++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~H~~~~~LID~~G~i~~~~~~~~~~~~i~~~i~~l 162 (171)
T 2rli_A 86 VQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKD---EDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCC---SSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCC---CCCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 75137420255464888899997506266512467---777406621206999979984999979999999999999999
Q ss_pred HHHCCC
Q ss_conf 851433
Q gi|254780281|r 194 ITYGNV 199 (201)
Q Consensus 194 l~~~~~ 199 (201)
|++=+-
T Consensus 163 La~~~~ 168 (171)
T 2rli_A 163 MAAFRS 168 (171)
T ss_dssp HHHHCC
T ss_pred HHHHHH
T ss_conf 998787