HHsearch results for GI: 254780281 and protein with PDBid: 2vm1_A
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-fold; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.12 E-value=1.4e-05 Score=53.15 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=63.5
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+||.+||+ .|....+.+.++.+.+.+ +.++.|..| +.++
T Consensus 26 ~~~k~vvv~f~a~wC~-~C~~~~p~~~~l~~~~~~----~~~~~v~~~---~~~~------------------------- 72 (118)
T 2vm1_A 26 DTGKLVIIDFTASWCG-PCRVIAPVFAEYAKKFPG----AIFLKVDVD---ELKD------------------------- 72 (118)
T ss_dssp HHTCCEEEEEECTTCH-HHHHHHHHHHHHHHHCTT----SEEEEEETT---TSHH-------------------------
T ss_pred CCCCEEEEEEECCCCH-HHHHHCHHHHHHHHHCCC----CCEEEEECC---CCHH-------------------------
T ss_conf 1499799999899898-899644466644332354----520365224---5566-------------------------
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 88860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
+++.|++.. .+++.++ ++|+.+..+.+ ..++++.+.|..+|..++
T Consensus 73 ~~~~~~i~~------------------~Pt~v~~-~~G~~v~~~~G-~~~~el~~~i~~~l~~a~ 117 (118)
T 2vm1_A 73 VAEAYNVEA------------------MPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGSAS 117 (118)
T ss_dssp HHHHTTCCS------------------BSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC---
T ss_pred HHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHHCCCC
T ss_conf 665204677------------------8889999-89989999959-799999999999845679