HHsearch results for GI: 254780281 and protein with PDBid: 3dml_A
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.39 E-value=0.00063 Score=43.24 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=66.2
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHH
Q ss_conf 78849967999960477765446888877655543024433305887651433333057777753136864224589889
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPID 130 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~ 130 (201)
.++-+.+..||.|...||| .|...-+.+..+.+.... .....+.++.+|. |... +
T Consensus 13 ~~~~~~~~~Lv~F~a~~Cp-~Ck~~~~~i~~~~~~~~~-~~~~~i~~v~vd~--~~~~---~------------------ 67 (116)
T 3dml_A 13 DDDDKAELRLLMFEQPGCL-YCARWDAEIAPQYPLTDE-GRAAPVQRLQMRD--PLPP---G------------------ 67 (116)
T ss_dssp ------CEEEEEEECTTCH-HHHHHHHHTTTTGGGSHH-HHHSCEEEEETTS--CCCT---T------------------
T ss_pred CCHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHH-HCCCCEEEEEECC--CCCH---H------------------
T ss_conf 7011368489999899984-378746888877655255-1268538998147--6698---8------------------
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 89888860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
++..|+ |...++++++ ++|+.+..+.+-.+++.....|++++++..
T Consensus 68 ---l~~~~~------------------V~g~PT~i~~-~~G~~v~r~~Gy~~~e~F~~~L~~~l~~~~ 113 (116)
T 3dml_A 68 ---LELARP------------------VTFTPTFVLM-AGDVESGRLEGYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp ---CBCSSC------------------CCSSSEEEEE-ETTEEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_pred ---HHHHCC------------------CCCCCEEEEE-ECCEEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf ---999869------------------7358848986-399996356699999999999999984138