HHsearch results for GI: 254780281 and protein with PDBid: 3emx_A
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.82 E-value=4.8e-05 Score=50.00 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=64.8
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
++| .++|+||.+||| .|-...+.+.++.+++.... +.+.....+- ..+.++...
T Consensus 30 l~~-~~iV~f~a~wC~-~C~~~~P~l~~la~e~~~~~--~~~~~~~~~~----------------------~~d~~~~~~ 83 (135)
T 3emx_A 30 LQG-DAILAVYSKTCP-HCHRDWPQLIQASKEVDVPI--VMFIWGSLIG----------------------ERELSAARL 83 (135)
T ss_dssp HTS-SEEEEEEETTCH-HHHHHHHHHHHHHTTCCSCE--EEEEECTTCC----------------------HHHHHHHHH
T ss_pred HCC-CEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCC--CCCCCCEEEE----------------------EECCHHHHH
T ss_conf 679-989999899996-76778189999999837542--2224632676----------------------640346789
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++.. .+++.++ .+|+.+..+.+..+.+.+.+.+++++..
T Consensus 84 ~~~~~~I~~------------------~PTli~~-k~Gk~v~r~~G~~p~~~~~e~~~~i~~~ 127 (135)
T 3emx_A 84 EMNKAGVEG------------------TPTLVFY-KEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 998537346------------------6869999-8998988998899668999999998778