HHsearch results for GI: 254780281 and protein with PDBid: 3emx_A

>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.82  E-value=4.8e-05  Score=50.00  Aligned_cols=98  Identities=15%  Similarity=0.097  Sum_probs=64.8

Q ss_pred             HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf             49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r   54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR  133 (201)
Q Consensus        54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~  133 (201)
                      ++| .++|+||.+||| .|-...+.+.++.+++....  +.+.....+-                      ..+.++...
T Consensus        30 l~~-~~iV~f~a~wC~-~C~~~~P~l~~la~e~~~~~--~~~~~~~~~~----------------------~~d~~~~~~   83 (135)
T 3emx_A           30 LQG-DAILAVYSKTCP-HCHRDWPQLIQASKEVDVPI--VMFIWGSLIG----------------------ERELSAARL   83 (135)
T ss_dssp             HTS-SEEEEEEETTCH-HHHHHHHHHHHHHTTCCSCE--EEEEECTTCC----------------------HHHHHHHHH
T ss_pred             HCC-CEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCC--CCCCCCEEEE----------------------EECCHHHHH
T ss_conf             679-989999899996-76778189999999837542--2224632676----------------------640346789


Q ss_pred             HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r  134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY  196 (201)
Q Consensus       134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~  196 (201)
                      +++.|++..                  .+++.++ .+|+.+..+.+..+.+.+.+.+++++..
T Consensus        84 ~~~~~~I~~------------------~PTli~~-k~Gk~v~r~~G~~p~~~~~e~~~~i~~~  127 (135)
T 3emx_A           84 EMNKAGVEG------------------TPTLVFY-KEGRIVDKLVGATPWSLKVEKAREIYGG  127 (135)
T ss_dssp             HHHHHTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred             HHHHHCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf             998537346------------------6869999-8998988998899668999999998778