HHsearch results for GI: 254780281 and protein with PDBid: 3f3q_A
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A
Probab=97.56 E-value=0.00041 Score=44.37 Aligned_cols=84 Identities=23% Similarity=0.282 Sum_probs=54.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|-...+.+.++.+.. .++.++.|..| +.+ .+
T Consensus 23 ~~k~vvv~F~a~wC~-~C~~~~~~l~~~a~~~----~~v~~~~vd~d---~~~-------------------------~l 69 (109)
T 3f3q_A 23 QDKLVVVDFYATWCG-PCKMIAPMIEKFSEQY----PQADFYKLDVD---ELG-------------------------DV 69 (109)
T ss_dssp SSSCEEEEEECTTCH-HHHHHHHHHHHHHHHC----TTSEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CCCCCCCCHHHHHHCC----CCCCEEEEECC---CCH-------------------------HH
T ss_conf 999599999899980-6036873014442025----66314687236---599-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKIN 191 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~ 191 (201)
++.|++.. .+++.++ ++|+.+..+.+ .+++++.+.|+
T Consensus 70 ~~~~~V~~------------------~Pt~i~~-~~G~~v~~~~G-~~~~~l~~~I~ 106 (109)
T 3f3q_A 70 AQKNEVSA------------------MPTLLLF-KNGKEVAKVVG-ANPAAIKQAIA 106 (109)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEES-SCHHHHHHHHH
T ss_pred HHHCCCCE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHH
T ss_conf 99859916------------------3879999-89989999979-99999999998