HHsearch results for GI: 254780281 and protein with PDBid: 3fk8_A
>3fk8_A Disulphide isomerase; APC61824.1, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.30A {Xylella fastidiosa TEMECULA1}
Probab=98.36 E-value=1.5e-06 Score=59.07 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=61.0
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCC
Q ss_conf 79677884996799996047776544688887765554302443330588765143333305777775313686422458
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISG 126 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg 126 (201)
+.+.....+||+++|+||.+||+ .|....+.+......... ..++.++.|.++-..+..
T Consensus 20 ~~l~~a~~~~K~vlv~F~a~WC~-~Ck~~~~~~~~~~~~~~~-~~~~~~v~vd~~~~~~~~------------------- 78 (133)
T 3fk8_A 20 KALAAGKRTHKPTLLVFGANWCT-DCRALDKSLRNQKNTALI-AKHFEVVKIDVGNFDRNL------------------- 78 (133)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCH-HHHHHHHHHTSHHHHHHH-HHHCEEEEEECTTTTSSH-------------------
T ss_pred HHHHHHHHCCCCEEEEEECCCCH-HHCCCCCCCCHHHHHHHH-CCCEEEEEEECCCCCCCH-------------------
T ss_conf 99999998599299999469193-017645232117889985-487499998678762068-------------------
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC-------CCHHHHHHHHHHHH
Q ss_conf 988989888860908862256556777752587420699985898299985789-------88899999999998
Q gi|254780281|r 127 DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK-------DDSDSAIEKINRLI 194 (201)
Q Consensus 127 ~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~-------~~~~~i~~~i~~ll 194 (201)
.+++.|++.- . .-.++++++|++|+++....++ .+++++.+-++++.
T Consensus 79 ------~~~~~~~~~~------~---------~g~Pt~~~~d~~Gk~i~~~~~~~~~~a~~~~~~~i~~~l~~~~ 132 (133)
T 3fk8_A 79 ------ELSQAYGDPI------Q---------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ------HHHHHTTCGG------G---------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHCC------C---------CCCCEEEEECCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHH
T ss_conf ------9999985415------6---------7898799997999897404654301010189999999999974