HHsearch results for GI: 254780281 and protein with PDBid: 3or5_A
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum}
Probab=99.87 E-value=5.7e-21 Score=146.06 Aligned_cols=142 Identities=18% Similarity=0.137 Sum_probs=117.3
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+...|+|+|+|.+|+.+++++++||+++++||.+||| .|..+++.|+++++.+.+. ++.+++|++| |+++.+++
T Consensus 11 p~paPdf~l~~~~g~~~~l~~~~Gk~vvl~F~~~~C~-~C~~~~~~l~~~~~~~~~~--~v~~v~v~~d---~~~~~~~~ 84 (165)
T 3or5_A 11 PTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCP-PCRSEIPDMVQVQKTWASR--GFTFVGIAVN---EQLPNVKN 84 (165)
T ss_dssp CCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSH-HHHHHHHHHHHHHHHHTTT--TEEEEEEECS---CCHHHHHH
T ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEEECCCC-CCCCCCCHHHHCCCCCCCC--CEEEEECCCC---HHHHHHHH
T ss_conf 9899983867899699829997999799999917999-7121270344101233331--0157621221---03799999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHH--HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 75313686422458988989888--8609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVA--KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~--~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
|++.++.+|..+..+.+...... ..+++ ...+.+||||++|+++..+.+..+.+++.+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------------------~~~P~~~iId~~G~I~~~~~G~~~~~~l~~~i 146 (165)
T 3or5_A 85 YMKTQGIIYPVMMATPELIRAFNGYIDGGI------------------TGIPTSFVIDASGNVSGVIVGPRSKADFDRIV 146 (165)
T ss_dssp HHHHHTCCSCEEECCHHHHHHHHTTSTTCS------------------CSSSEEEEECTTSBEEEEECSCCCHHHHHHHH
T ss_pred HHHHHCCCCCEEECCHHHHHHHHHHHHCCC------------------CCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
T ss_conf 999959987278618889887666765384------------------42467999989997999996999999999999
Q ss_pred HHHHHHCC
Q ss_conf 99985143
Q gi|254780281|r 191 NRLITYGN 198 (201)
Q Consensus 191 ~~ll~~~~ 198 (201)
+.+|+...
T Consensus 147 ~~~l~~~a 154 (165)
T 3or5_A 147 KMALGAKA 154 (165)
T ss_dssp HHHHC---
T ss_pred HHHHCCCC
T ss_conf 99718877