Query gi|254780281|ref|YP_003064694.1| cytochrome-c oxidase assembly factor protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 201
No_of_seqs 115 out of 1761
Neff 7.9
Searched_HMMs 23785
Date Mon May 30 07:40:16 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780281.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2b7k_A SCO1 protein; metalloch 100.0 9.8E-45 0 289.5 13.9 166 30-197 15-185 (200)
2 2k6v_A Putative cytochrome C o 100.0 1.2E-40 4.2E-45 264.9 12.7 155 35-194 15-172 (172)
3 1xzo_A BSSCO, hypothetical pro 100.0 1.5E-35 6.1E-40 234.1 15.3 154 34-194 11-171 (174)
4 2ggt_A SCO1 protein homolog, m 100.0 2.6E-33 1.1E-37 220.6 18.1 161 35-198 2-164 (164)
5 2rli_A SCO2 protein homolog, m 100.0 3.1E-31 1.3E-35 208.0 17.3 161 36-199 6-168 (171)
6 3me7_A Putative uncharacterize 100.0 4E-30 1.7E-34 201.3 16.8 156 34-199 5-166 (170)
7 2obi_A PHGPX, GPX-4, phospholi 99.9 3.2E-24 1.4E-28 165.7 7.6 148 37-193 28-182 (183)
8 3dwv_A Glutathione peroxidase- 99.9 2E-24 8.5E-29 166.9 4.1 152 35-199 25-187 (187)
9 2gs3_A PHGPX, GPX-4, phospholi 99.9 7.2E-23 3E-27 157.5 11.0 149 36-193 29-184 (185)
10 2vup_A Glutathione peroxidase- 99.9 1.9E-23 7.8E-28 161.1 3.5 150 35-198 27-188 (190)
11 2v1m_A Glutathione peroxidase; 99.9 1.7E-23 7.3E-28 161.3 3.3 147 37-197 12-169 (169)
12 3or5_A Thiol:disulfide interch 99.9 5.7E-21 2.4E-25 146.1 14.8 142 33-198 11-154 (165)
13 2hyx_A Protein DIPZ; thioredox 99.9 3.2E-21 1.3E-25 147.6 12.3 140 35-198 56-202 (352)
14 3cmi_A Peroxiredoxin HYR1; thi 99.9 1.7E-22 7.1E-27 155.3 5.3 148 37-197 13-170 (171)
15 3lwa_A Secreted thiol-disulfid 99.8 9E-21 3.8E-25 144.9 12.1 144 33-197 34-183 (183)
16 1jfu_A Thiol:disulfide interch 99.8 5.8E-20 2.4E-24 140.0 14.7 145 31-198 35-183 (186)
17 3cyn_A Probable glutathione pe 99.8 2.4E-20 1E-24 142.3 12.6 142 37-196 28-180 (189)
18 2p5q_A Glutathione peroxidase 99.8 2.4E-21 9.9E-26 148.4 6.4 145 35-195 11-168 (170)
19 3fw2_A Thiol-disulfide oxidore 99.8 1.2E-19 4.9E-24 138.2 14.4 141 31-197 6-150 (150)
20 3ixr_A Bacterioferritin comigr 99.8 1.1E-19 4.7E-24 138.3 13.0 143 37-195 32-178 (179)
21 2p31_A CL683, glutathione pero 99.8 4.6E-21 1.9E-25 146.6 5.5 140 37-195 30-181 (181)
22 2ywn_A Peroxiredoxin-like prot 99.8 4.3E-19 1.8E-23 134.8 14.8 145 32-193 6-156 (157)
23 2cx4_A Bacterioferritin comigr 99.8 9.8E-19 4.1E-23 132.6 15.1 148 32-197 7-162 (164)
24 3ia1_A THIO-disulfide isomeras 99.8 1.4E-19 5.7E-24 137.8 10.7 137 33-195 8-144 (154)
25 2f9s_A Thiol-disulfide oxidore 99.8 5E-19 2.1E-23 134.3 13.1 138 33-198 3-140 (151)
26 3gkn_A Bacterioferritin comigr 99.8 5.6E-19 2.4E-23 134.1 13.3 148 32-195 11-162 (163)
27 3kcm_A Thioredoxin family prot 99.8 9.9E-19 4.2E-23 132.6 12.4 137 35-197 7-145 (154)
28 3lor_A Thiol-disulfide isomera 99.8 9.4E-19 4E-23 132.7 12.1 141 37-198 10-158 (160)
29 3erw_A Sporulation thiol-disul 99.8 8.6E-19 3.6E-23 132.9 11.4 134 32-190 11-144 (145)
30 3eyt_A Uncharacterized protein 99.8 9.4E-19 3.9E-23 132.7 10.6 145 34-198 4-155 (158)
31 3ewl_A Uncharacterized conserv 99.8 1.2E-18 5E-23 132.1 10.6 139 32-196 3-142 (142)
32 1lu4_A Soluble secreted antige 99.8 1.7E-18 7E-23 131.2 11.3 131 36-195 4-136 (136)
33 2cvb_A Probable thiol-disulfid 99.8 3.5E-18 1.5E-22 129.3 12.6 142 33-199 10-163 (188)
34 2ywi_A Hypothetical conserved 99.8 7.8E-18 3.3E-22 127.2 13.6 144 32-199 20-178 (196)
35 3fkf_A Thiol-disulfide oxidore 99.8 8.8E-18 3.7E-22 126.8 13.3 139 32-196 7-147 (148)
36 3gl3_A Putative thiol:disulfid 99.8 1.3E-17 5.7E-22 125.7 13.8 136 33-196 6-143 (152)
37 3hcz_A Possible thiol-disulfid 99.8 1.9E-18 8.1E-23 130.8 9.4 141 32-197 7-148 (148)
38 3eur_A Uncharacterized protein 99.8 4E-18 1.7E-22 128.9 10.2 134 32-191 7-141 (142)
39 2b5x_A YKUV protein, TRXY; thi 99.7 7.9E-18 3.3E-22 127.1 10.4 139 34-197 5-147 (148)
40 1xvw_A Hypothetical protein RV 99.7 3.4E-17 1.4E-21 123.3 13.2 143 32-194 11-159 (160)
41 3hdc_A Thioredoxin family prot 99.7 7.9E-18 3.3E-22 127.1 10.0 132 32-193 17-150 (158)
42 3ha9_A Uncharacterized thiored 99.7 3.7E-18 1.6E-22 129.1 8.0 148 35-194 16-163 (165)
43 1zzo_A RV1677; thioredoxin fol 99.7 8.9E-17 3.7E-21 120.8 12.5 131 36-196 5-136 (136)
44 3drn_A Peroxiredoxin, bacterio 99.7 1.1E-16 4.7E-21 120.2 12.2 141 33-196 5-150 (161)
45 2c0d_A Thioredoxin peroxidase 99.7 2.4E-16 1E-20 118.2 13.6 141 32-195 27-184 (221)
46 2pn8_A Peroxiredoxin-4; thiore 99.7 2.3E-16 9.6E-21 118.3 13.4 145 28-194 17-176 (211)
47 2yzh_A Probable thiol peroxida 99.7 8E-17 3.4E-21 121.1 10.5 142 32-194 23-171 (171)
48 3kh7_A Thiol:disulfide interch 99.7 2.9E-16 1.2E-20 117.7 13.1 132 34-196 34-168 (176)
49 1o8x_A Tryparedoxin, TRYX, TXN 99.7 2.2E-16 9.2E-21 118.4 11.6 120 32-176 4-125 (146)
50 1zye_A Thioredoxin-dependent p 99.7 9E-16 3.8E-20 114.7 14.4 142 32-195 29-185 (220)
51 1we0_A Alkyl hydroperoxide red 99.7 2.9E-16 1.2E-20 117.7 11.4 139 34-194 5-156 (187)
52 1e2y_A TRYP, tryparedoxin pero 99.7 6.1E-16 2.6E-20 115.7 12.6 140 33-194 9-164 (188)
53 2h30_A Thioredoxin, peptide me 99.7 6.5E-17 2.7E-21 121.6 7.5 134 38-195 20-156 (164)
54 1uul_A Tryparedoxin peroxidase 99.7 5.1E-16 2.2E-20 116.2 12.1 140 33-194 9-164 (202)
55 2bmx_A Alkyl hydroperoxidase C 99.7 6.7E-16 2.8E-20 115.5 12.7 140 32-194 6-169 (195)
56 3keb_A Probable thiol peroxida 99.7 2.1E-15 8.9E-20 112.5 14.4 148 32-197 24-178 (224)
57 2jsy_A Probable thiol peroxida 99.7 6.7E-16 2.8E-20 115.5 11.5 141 32-195 20-167 (167)
58 1n8j_A AHPC, alkyl hydroperoxi 99.7 1.6E-15 6.8E-20 113.2 13.4 139 34-194 5-155 (186)
59 2b1k_A Thiol:disulfide interch 99.7 1.4E-15 5.7E-20 113.6 12.2 133 33-196 25-161 (168)
60 3hvv_A Thiol peroxidase, scave 99.6 3.1E-15 1.3E-19 111.4 12.9 139 32-190 20-165 (167)
61 1qmv_A Human thioredoxin perox 99.6 3.7E-15 1.5E-19 111.0 13.0 140 33-194 8-162 (197)
62 1psq_A Probable thiol peroxida 99.6 2.4E-15 1E-19 112.1 11.7 139 32-193 18-163 (163)
63 2f8a_A Glutathione peroxidase 99.6 9.8E-16 4.1E-20 114.5 9.6 151 37-196 27-208 (208)
64 1o73_A Tryparedoxin; electron 99.6 2.2E-15 9.2E-20 112.4 11.3 121 32-177 4-126 (144)
65 1xvq_A Thiol peroxidase; thior 99.6 2.7E-15 1.1E-19 111.8 11.8 141 32-193 20-166 (175)
66 2h01_A 2-Cys peroxiredoxin; th 99.6 4.7E-15 2E-19 110.4 13.0 138 34-194 4-158 (192)
67 1i5g_A Tryparedoxin II; electr 99.6 2.8E-15 1.2E-19 111.8 11.4 114 38-176 10-125 (144)
68 2i81_A 2-Cys peroxiredoxin; st 99.6 1E-14 4.3E-19 108.3 13.5 139 33-194 24-179 (213)
69 1q98_A Thiol peroxidase, TPX; 99.6 7.2E-15 3E-19 109.2 12.4 127 31-177 18-146 (165)
70 1kng_A Thiol:disulfide interch 99.6 2E-15 8.2E-20 112.7 9.4 133 35-197 13-154 (156)
71 3a2v_A Probable peroxiredoxin; 99.6 6.5E-15 2.7E-19 109.5 9.9 141 32-194 7-161 (249)
72 2v2g_A Peroxiredoxin 6; oxidor 99.6 9.4E-14 4E-18 102.5 15.2 145 33-194 6-164 (233)
73 1zof_A Alkyl hydroperoxide-red 99.6 6.7E-15 2.8E-19 109.5 8.4 140 33-195 4-161 (198)
74 1xcc_A 1-Cys peroxiredoxin; un 99.6 2.4E-13 1E-17 100.0 15.0 146 33-194 6-165 (220)
75 2a4v_A Peroxiredoxin DOT5; yea 99.5 1.2E-13 5.1E-18 101.8 12.1 123 32-178 9-134 (159)
76 1prx_A HORF6; peroxiredoxin, h 99.5 2.8E-13 1.2E-17 99.6 11.2 146 33-195 8-169 (224)
77 2i3y_A Epididymal secretory gl 99.3 1.2E-10 5.2E-15 83.7 15.9 152 37-198 36-214 (215)
78 2r37_A Glutathione peroxidase 99.3 8.2E-11 3.5E-15 84.8 14.7 152 37-198 18-196 (207)
79 2wfc_A Peroxiredoxin 5, PRDX5; 99.0 4.1E-09 1.7E-13 74.5 12.0 143 33-191 6-160 (167)
80 3mng_A Peroxiredoxin-5, mitoch 99.0 1.1E-09 4.5E-14 78.1 8.6 131 32-177 17-153 (173)
81 1tp9_A Peroxiredoxin, PRX D (t 98.8 2.1E-08 8.6E-13 70.3 9.6 129 32-177 6-143 (162)
82 3f9u_A Putative exported cytoc 98.8 2.3E-09 9.6E-14 76.1 3.5 124 47-196 38-167 (172)
83 2ju5_A Thioredoxin disulfide i 98.8 2E-08 8.4E-13 70.4 8.3 123 37-196 29-153 (154)
84 2l57_A Uncharacterized protein 98.8 9.1E-09 3.8E-13 72.4 5.9 99 52-198 22-121 (126)
85 1z6n_A Hypothetical protein PA 98.7 5.9E-10 2.5E-14 79.6 -1.2 117 50-196 48-164 (167)
86 2kuc_A Putative disulphide-iso 98.6 6.8E-08 2.9E-12 67.2 6.3 104 48-196 19-122 (130)
87 1v98_A Thioredoxin; oxidoreduc 98.5 6.3E-07 2.7E-11 61.3 10.0 109 37-196 31-139 (140)
88 2pwj_A Mitochondrial peroxired 98.5 6.9E-07 2.9E-11 61.1 9.2 142 32-190 9-171 (171)
89 3hxs_A Thioredoxin, TRXP; elec 98.5 4.9E-07 2.1E-11 62.0 8.1 106 41-197 36-141 (141)
90 3fk8_A Disulphide isomerase; A 98.4 1.5E-06 6.3E-11 59.1 8.2 106 47-194 20-132 (133)
91 1nm3_A Protein HI0572; hybrid, 98.4 7.7E-06 3.2E-10 54.8 11.7 142 33-191 6-163 (241)
92 3hz4_A Thioredoxin; NYSGXRC, P 98.3 3.4E-06 1.4E-10 56.9 9.6 92 55-197 23-114 (140)
93 3gnj_A Thioredoxin domain prot 98.3 3.6E-06 1.5E-10 56.8 9.3 91 55-196 21-111 (111)
94 1t00_A Thioredoxin, TRX; struc 98.3 3.3E-06 1.4E-10 57.0 8.6 91 55-196 22-112 (112)
95 2fwh_A Thiol:disulfide interch 98.3 1.5E-06 6.5E-11 59.0 6.8 98 51-192 26-125 (134)
96 3d6i_A Monothiol glutaredoxin- 98.2 8.4E-06 3.5E-10 54.6 9.8 93 55-198 20-112 (112)
97 3d22_A TRXH4, thioredoxin H-ty 98.2 8.8E-06 3.7E-10 54.4 9.5 91 54-197 44-134 (139)
98 2voc_A Thioredoxin; electron t 98.2 4.6E-06 1.9E-10 56.2 7.6 93 54-197 15-107 (112)
99 1dby_A Chloroplast thioredoxin 98.2 1.1E-05 4.6E-10 53.8 9.3 90 55-195 18-107 (107)
100 2e0q_A Thioredoxin; electron t 98.2 1.1E-05 4.7E-10 53.8 9.3 90 55-196 15-104 (104)
101 2ppt_A Thioredoxin-2; thiredox 98.1 9.6E-06 4E-10 54.2 8.3 105 40-195 48-152 (155)
102 2trx_A Thioredoxin; electron t 98.1 1.8E-05 7.4E-10 52.6 9.5 90 55-195 19-108 (108)
103 3p2a_A Thioredoxin 2, putative 98.1 2.3E-05 9.5E-10 51.9 9.8 92 55-197 54-145 (148)
104 2vm1_A Thioredoxin, thioredoxi 98.1 1.4E-05 6E-10 53.2 8.8 92 54-198 26-117 (118)
105 1w4v_A Thioredoxin, mitochondr 98.0 3.1E-05 1.3E-09 51.1 9.2 89 55-194 30-118 (119)
106 1thx_A Thioredoxin, thioredoxi 98.0 4.5E-05 1.9E-09 50.1 10.0 91 55-196 24-114 (115)
107 1r26_A Thioredoxin; redox-acti 98.0 2.5E-05 1.1E-09 51.7 8.6 89 55-196 36-124 (125)
108 1x5d_A Protein disulfide-isome 98.0 4.1E-05 1.7E-09 50.4 9.7 94 55-196 24-118 (133)
109 3dxb_A Thioredoxin N-terminall 98.0 2.6E-05 1.1E-09 51.6 8.5 43 55-101 29-71 (222)
110 3m9j_A Thioredoxin; oxidoreduc 98.0 4E-05 1.7E-09 50.5 9.1 89 53-194 17-105 (105)
111 2o8v_B Thioredoxin 1; disulfid 98.0 3.3E-05 1.4E-09 51.0 8.4 90 55-195 39-128 (128)
112 2wz9_A Glutaredoxin-3; protein 98.0 4.2E-05 1.8E-09 50.4 8.9 92 55-199 31-122 (153)
113 1gh2_A Thioredoxin-like protei 98.0 5.2E-05 2.2E-09 49.8 9.3 91 52-195 17-107 (107)
114 1xwb_A Thioredoxin; dimerizati 98.0 6.9E-05 2.9E-09 49.0 9.8 89 51-191 15-103 (106)
115 1zma_A Bacterocin transport ac 98.0 5.8E-05 2.4E-09 49.5 9.3 88 55-189 28-115 (118)
116 2vlu_A Thioredoxin, thioredoxi 98.0 4.5E-05 1.9E-09 50.2 8.7 90 52-194 30-119 (122)
117 2qgv_A Hydrogenase-1 operon pr 97.9 2.9E-05 1.2E-09 51.3 7.7 93 55-197 35-127 (140)
118 3die_A Thioredoxin, TRX; elect 97.9 4E-05 1.7E-09 50.5 8.4 89 53-192 16-104 (106)
119 1xfl_A Thioredoxin H1; AT3G510 97.9 4.9E-05 2.1E-09 49.9 8.8 88 54-194 36-123 (124)
120 1fb6_A Thioredoxin M; electron 97.9 4.3E-05 1.8E-09 50.3 8.4 88 56-194 18-105 (105)
121 2vim_A Thioredoxin, TRX; thior 97.9 5.9E-05 2.5E-09 49.4 8.8 88 52-192 15-102 (104)
122 2i1u_A Thioredoxin, TRX, MPT46 97.9 1.6E-05 6.6E-10 52.9 5.8 91 55-196 29-119 (121)
123 1faa_A Thioredoxin F; electron 97.9 7E-05 2.9E-09 49.0 8.8 89 53-193 34-122 (124)
124 2dml_A Protein disulfide-isome 97.9 0.0001 4.2E-09 48.0 9.5 93 55-197 34-126 (130)
125 1nsw_A Thioredoxin, TRX; therm 97.9 2.8E-05 1.2E-09 51.4 6.6 89 55-194 16-104 (105)
126 2yzu_A Thioredoxin; redox prot 97.8 5E-05 2.1E-09 49.9 7.3 90 55-195 17-106 (109)
127 1ep7_A Thioredoxin CH1, H-type 97.8 0.00012 5E-09 47.6 9.2 88 55-194 23-110 (112)
128 3emx_A Thioredoxin; structural 97.8 4.8E-05 2E-09 50.0 7.0 98 54-196 30-127 (135)
129 1oaz_A Thioredoxin 1; immune s 97.8 3.8E-05 1.6E-09 50.6 6.4 93 55-195 20-123 (123)
130 2dj1_A Protein disulfide-isome 97.8 9.4E-05 4E-09 48.2 8.3 94 54-196 32-125 (140)
131 1sen_A Thioredoxin-like protei 97.8 1.9E-05 8.2E-10 52.4 4.6 102 47-195 37-148 (164)
132 2pu9_C TRX-F, thioredoxin F-ty 97.8 0.00017 7.3E-09 46.6 9.0 87 55-193 23-109 (111)
133 2j23_A Thioredoxin; immune pro 97.7 0.00018 7.6E-09 46.5 8.5 87 55-192 32-118 (121)
134 2i4a_A Thioredoxin; acidophIle 97.7 0.00029 1.2E-08 45.2 9.3 87 55-192 19-105 (107)
135 2xc2_A Thioredoxinn; oxidoredu 97.7 0.00023 9.8E-09 45.9 8.7 89 52-194 29-117 (117)
136 2diz_A Thioredoxin domain-cont 97.7 8E-05 3.4E-09 48.6 6.2 94 54-195 21-114 (117)
137 2dlx_A UBX domain-containing p 97.7 0.00036 1.5E-08 44.7 9.5 103 47-198 33-139 (153)
138 1xiy_A Peroxiredoxin, pfaop; a 97.7 0.00081 3.4E-08 42.6 11.3 128 47-191 33-178 (182)
139 3cxg_A Putative thioredoxin; m 97.7 0.00017 7E-09 46.7 7.6 44 51-100 35-78 (133)
140 2f51_A Thioredoxin; electron t 97.6 0.00021 8.8E-09 46.1 7.9 87 55-192 22-110 (118)
141 1ti3_A Thioredoxin H, PTTRXH1; 97.6 0.00029 1.2E-08 45.2 8.7 87 54-193 24-110 (113)
142 1fo5_A Thioredoxin; disulfide 97.6 0.0001 4.3E-09 48.0 6.2 84 56-194 2-85 (85)
143 3f3q_A Thioredoxin-1; His TAG, 97.6 0.00041 1.7E-08 44.4 8.6 84 55-191 23-106 (109)
144 2es7_A Q8ZP25_salty, putative 97.5 0.00012 5.2E-09 47.5 5.8 92 55-196 35-126 (142)
145 2oe3_A Thioredoxin-3; electron 97.4 0.00045 1.9E-08 44.1 7.4 86 55-193 29-114 (114)
146 1x5e_A Thioredoxin domain cont 97.4 0.001 4.2E-08 42.0 9.1 90 54-195 21-110 (126)
147 1syr_A Thioredoxin; SGPP, stru 97.4 0.0008 3.3E-08 42.6 8.3 85 55-192 25-109 (112)
148 3dml_A Putative uncharacterize 97.4 0.00063 2.6E-08 43.2 7.8 101 51-198 13-113 (116)
149 2dj0_A Thioredoxin-related tra 97.4 0.00018 7.6E-09 46.5 5.0 47 52-101 22-68 (137)
150 2qsi_A Putative hydrogenase ex 97.4 0.0021 8.7E-08 40.1 10.0 91 55-196 32-124 (137)
151 1mek_A Protein disulfide isome 97.3 0.00036 1.5E-08 44.7 6.0 105 43-195 11-117 (120)
152 1a8l_A Protein disulfide oxido 97.1 0.0042 1.8E-07 38.3 9.8 93 55-195 133-226 (226)
153 1x5c_A Protein disulfide-isome 97.1 0.0023 9.5E-08 39.9 8.1 91 55-195 24-115 (121)
154 1nho_A Probable thioredoxin; b 97.1 0.001 4.2E-08 42.0 5.9 82 58-194 3-84 (85)
155 1wou_A Thioredoxin -related pr 97.0 0.00059 2.5E-08 43.4 4.4 47 51-101 19-72 (123)
156 2av4_A Thioredoxin-like protei 96.9 0.00081 3.4E-08 42.6 4.4 59 39-101 21-82 (160)
157 1qgv_A Spliceosomal protein U5 96.9 0.00081 3.4E-08 42.6 4.1 43 55-101 22-64 (142)
158 1wmj_A Thioredoxin H-type; str 96.9 0.00018 7.6E-09 46.5 0.7 91 53-196 33-123 (130)
159 3idv_A Protein disulfide-isome 96.9 0.0088 3.7E-07 36.3 9.3 46 55-101 31-76 (241)
160 3evi_A Phosducin-like protein 96.8 0.0031 1.3E-07 39.0 6.8 92 55-201 22-116 (118)
161 2dj3_A Protein disulfide-isome 96.8 0.0071 3E-07 36.9 8.5 94 55-197 24-120 (133)
162 3gix_A Thioredoxin-like protei 96.4 0.0046 1.9E-07 38.1 5.4 43 55-101 22-64 (149)
163 2ec4_A FAS-associated factor 1 96.2 0.07 2.9E-06 30.9 10.8 112 53-196 52-169 (178)
164 3ed3_A Protein disulfide-isome 96.2 0.036 1.5E-06 32.6 9.0 42 56-101 35-76 (298)
165 2r2j_A Thioredoxin domain-cont 96.2 0.061 2.6E-06 31.3 10.1 45 55-100 21-68 (382)
166 2hls_A Protein disulfide oxido 96.1 0.068 2.9E-06 31.0 10.1 93 52-196 134-227 (243)
167 3f8u_A Protein disulfide-isome 96.0 0.062 2.6E-06 31.2 9.5 43 56-100 370-412 (481)
168 2rem_A Disulfide oxidoreductas 96.0 0.033 1.4E-06 32.9 7.9 137 52-198 21-187 (193)
169 3idv_A Protein disulfide-isome 95.9 0.069 2.9E-06 30.9 9.2 90 55-193 146-235 (241)
170 3h79_A Thioredoxin-like protei 95.6 0.044 1.9E-06 32.1 7.2 46 55-101 32-77 (127)
171 2ywm_A Glutaredoxin-like prote 95.2 0.13 5.3E-06 29.4 8.6 89 55-198 135-223 (229)
172 3feu_A Putative lipoprotein; a 95.0 0.015 6.3E-07 34.9 3.4 151 33-196 5-185 (185)
173 3hd5_A Thiol:disulfide interch 94.9 0.048 2E-06 31.9 5.8 137 55-198 24-187 (195)
174 2djj_A PDI, protein disulfide- 94.7 0.031 1.3E-06 33.1 4.4 35 55-90 24-58 (121)
175 3c7m_A Thiol:disulfide interch 94.5 0.031 1.3E-06 33.0 4.0 136 55-196 16-195 (195)
176 2fgx_A Putative thioredoxin; N 93.9 0.042 1.8E-06 32.2 3.6 77 57-189 29-105 (107)
177 3gv1_A Disulfide interchange p 93.4 0.22 9.4E-06 27.8 6.6 113 56-198 14-142 (147)
178 1bed_A DSBA oxidoreductase; TC 93.2 0.2 8.5E-06 28.1 6.0 138 55-197 17-181 (181)
179 2dbc_A PDCL2, unnamed protein 93.1 0.098 4.1E-06 30.0 4.4 39 55-98 29-67 (135)
180 1wjk_A C330018D20RIK protein; 93.1 0.23 9.7E-06 27.8 6.3 83 56-196 15-97 (100)
181 3h93_A Thiol:disulfide interch 93.1 0.076 3.2E-06 30.7 3.8 140 54-198 23-187 (192)
182 3ga4_A Dolichyl-diphosphooligo 92.6 0.15 6.4E-06 28.9 4.8 58 54-113 35-99 (178)
183 3hz8_A Thiol:disulfide interch 92.1 0.22 9.3E-06 27.9 5.1 34 55-89 23-56 (193)
184 3bci_A Disulfide bond protein 91.9 0.25 1.1E-05 27.6 5.2 138 52-197 7-180 (186)
185 2b5e_A Protein disulfide-isome 91.5 0.16 6.6E-06 28.8 3.9 31 56-87 376-406 (504)
186 2c0g_A ERP29 homolog, windbeut 91.2 0.82 3.4E-05 24.5 7.6 44 55-101 32-75 (248)
187 1sji_A Calsequestrin 2, calseq 90.8 0.56 2.4E-05 25.4 6.1 31 55-86 26-56 (350)
188 3gyk_A 27KDA outer membrane pr 89.7 0.79 3.3E-05 24.6 6.1 134 52-197 18-175 (175)
189 2trc_P Phosducin, MEKA, PP33; 89.5 0.45 1.9E-05 26.0 4.7 94 55-201 119-215 (217)
190 3ira_A Conserved protein; meth 89.3 1.2 5E-05 23.5 8.6 68 39-113 22-92 (173)
191 2znm_A Thiol:disulfide interch 89.2 0.27 1.1E-05 27.4 3.4 134 55-198 21-183 (195)
192 1v58_A Thiol:disulfide interch 88.6 1.3 5.5E-05 23.2 10.1 113 55-192 96-230 (241)
193 1cq3_A Viral chemokine inhibit 88.5 0.15 6.5E-06 28.8 1.7 43 56-108 76-118 (233)
194 3l9s_A Thiol:disulfide interch 88.2 0.31 1.3E-05 27.0 3.1 138 55-196 20-190 (191)
195 1a0r_P Phosducin, MEKA, PP33; 86.4 0.95 4E-05 24.0 4.8 40 55-99 132-171 (245)
196 3gmf_A Protein-disulfide isome 85.9 1.9 8E-05 22.3 7.3 35 158-198 166-200 (205)
197 1t3b_A Thiol:disulfide interch 81.7 2.9 0.00012 21.2 8.9 108 55-192 85-208 (211)
198 3l9v_A Putative thiol-disulfid 81.6 1.6 6.9E-05 22.6 4.3 40 155-197 140-185 (189)
199 2in3_A Hypothetical protein; D 79.7 3.4 0.00014 20.8 7.0 141 56-199 6-214 (216)
200 3lgi_A Protease DEGS; stress-s 75.1 2 8.5E-05 22.1 3.2 37 165-201 179-231 (237)
201 3kzq_A Putative uncharacterize 72.8 3 0.00013 21.0 3.6 138 57-197 2-205 (208)
202 3kp8_A Vkorc1/thioredoxin doma 70.9 1.7 7.1E-05 22.5 2.0 27 60-87 16-42 (106)
203 2dfa_A Hypothetical UPF0271 pr 68.5 5 0.00021 19.7 4.0 77 108-199 126-205 (250)
204 1a8y_A Calsequestrin; calcium- 66.0 7.2 0.0003 18.7 8.9 18 57-76 31-48 (367)
205 3nzn_A Glutaredoxin; structura 64.8 2.8 0.00012 21.2 2.1 22 57-79 21-42 (103)
206 3gha_A Disulfide bond formatio 64.0 7.9 0.00033 18.5 7.7 133 55-195 28-192 (202)
207 3f4s_A Alpha-DSBA1, putative u 62.5 8.4 0.00035 18.4 6.5 139 55-198 38-214 (226)
208 2g2q_A Glutaredoxin-2; thiored 61.1 3.5 0.00015 20.6 2.0 29 57-86 2-30 (124)
209 2qc7_A ERP31, ERP28, endoplasm 60.8 9 0.00038 18.2 9.2 43 55-101 21-63 (240)
210 2a2u_A Protein (alpha-2U-globu 60.2 3.2 0.00013 20.9 1.7 23 47-70 27-49 (181)
211 1v6t_A Hypothetical UPF0271 pr 55.2 11 0.00047 17.6 4.0 115 71-200 83-206 (255)
212 3kp9_A Vkorc1/thioredoxin doma 55.0 5.9 0.00025 19.3 2.3 38 48-86 189-226 (291)
213 3ic4_A Glutaredoxin (GRX-1); s 53.0 3.1 0.00013 21.0 0.6 27 54-81 8-34 (92)
214 1xw8_A UPF0271 protein YBGL; N 50.3 6.6 0.00028 19.0 2.0 113 72-199 79-200 (252)
215 2e7p_A Glutaredoxin; thioredox 47.9 12 0.00052 17.3 3.1 39 60-108 22-60 (116)
216 1un2_A DSBA, thiol-disulfide i 45.7 13 0.00055 17.2 2.9 43 55-101 112-157 (197)
217 3cbc_A Neutrophil gelatinase-a 45.3 7.8 0.00033 18.6 1.7 22 47-69 40-61 (198)
218 1eej_A Thiol:disulfide interch 35.9 23 0.00095 15.7 10.6 111 55-195 85-211 (216)
219 1xhj_A Nitrogen fixation prote 35.0 19 0.0008 16.2 2.4 53 45-99 26-80 (88)
220 3daw_B Twinfilin-1, protein A6 34.8 22 0.00093 15.8 2.7 22 58-79 92-113 (164)
221 3l4n_A Monothiol glutaredoxin- 34.0 24 0.001 15.6 3.3 53 56-117 13-65 (127)
222 1hyu_A AHPF, alkyl hydroperoxi 33.7 25 0.001 15.5 3.9 31 51-82 112-142 (521)
223 2gx5_A GTP-sensing transcripti 27.1 32 0.0013 14.8 4.6 10 177-186 141-150 (170)
224 2ht9_A Glutaredoxin-2; thiored 25.8 34 0.0014 14.7 4.3 19 60-79 51-69 (146)
225 2djk_A PDI, protein disulfide- 24.6 36 0.0015 14.6 3.6 41 55-102 22-62 (133)
226 2x8g_A Thioredoxin glutathione 24.5 16 0.00065 16.7 0.4 33 165-197 524-558 (598)
227 2w5v_A Alkaline phosphatase; p 24.1 36 0.0015 14.5 2.8 80 1-82 1-94 (375)
228 1ilo_A Conserved hypothetical 24.1 36 0.0015 14.5 4.7 31 63-98 7-37 (77)
229 3fz9_A Glutaredoxin; oxidoredu 23.7 37 0.0016 14.5 3.3 32 60-101 20-51 (112)
230 2kjz_A ATC0852; protein of unk 23.6 37 0.0016 14.4 2.8 17 162-178 125-141 (144)
231 1l1j_A Heat shock protease HTR 23.2 36 0.0015 14.6 2.1 37 165-201 186-234 (239)
232 1h75_A Glutaredoxin-like prote 22.5 39 0.0016 14.3 2.3 32 60-101 3-34 (81)
233 1ego_A Glutaredoxin; electron 22.2 40 0.0017 14.3 2.8 37 60-101 3-39 (85)
234 3ju3_A Probable 2-oxoacid ferr 20.9 37 0.0016 14.5 1.8 100 56-196 14-118 (118)
235 1cfy_A Cofilin; actin-binding, 20.9 39 0.0017 14.3 1.9 15 66-80 87-101 (143)
236 3msz_A Glutaredoxin 1; alpha-b 20.8 29 0.0012 15.1 1.2 21 60-81 6-26 (89)
No 1
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=100.00 E-value=9.8e-45 Score=289.47 Aligned_cols=166 Identities=31% Similarity=0.609 Sum_probs=148.3
Q ss_pred CCCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCHH
Q ss_conf 766666787079829997967788499679999604777654468888776555430244-3330588765143333305
Q gi|254780281|r 30 DGNRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT-GTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 30 ~~~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~-~~~v~~v~IsvDP~rDt~e 108 (201)
.+.+.+++||+|+|++|+++++++|+|||++++||||+|||+||.++.+|+++++++.++ +.++++++||+||+|||||
T Consensus 15 ~~~p~ig~dF~L~d~~G~~v~l~dl~Gk~~lv~F~yt~CpdvCp~~~~~m~~~~~~l~~~~~~~v~~v~IsvDP~~Dtpe 94 (200)
T 2b7k_A 15 YGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPA 94 (200)
T ss_dssp -CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHH
T ss_pred CCCCCCCCCEEEEECCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHH
T ss_conf 89887389917980898996489969988999988898998587899987668765022334432332034785667889
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCH----H
Q ss_conf 777775313686422458988989888860908862256556777752587420699985898299985789888----9
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDS----D 184 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~----~ 184 (201)
+|++|++.|+++|++|||+.+++..++++||++|........ ..+|+++|++.+|||||+|+++..|+.+.++ +
T Consensus 95 ~l~~y~~~~~~~~~~Ltg~~~~i~~l~~~~gv~~~~~~~~~~--~~~y~i~Hs~~~~LIDp~G~i~~~~~~~~~~~~~~~ 172 (200)
T 2b7k_A 95 VLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKP--GQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVD 172 (200)
T ss_dssp HHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC----------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHH
T ss_pred HHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCEEEECCCCCC--CCCCEEECCCEEEEECCCCCEEEEECCCCCHHHHHH
T ss_conf 999999704886120259999999999975956984588877--667245042169999499968989789998688999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999998514
Q gi|254780281|r 185 SAIEKINRLITYG 197 (201)
Q Consensus 185 ~i~~~i~~ll~~~ 197 (201)
.|+++|+.||.+.
T Consensus 173 ~I~edIk~ll~~~ 185 (200)
T 2b7k_A 173 KIVEHVKSYVPAE 185 (200)
T ss_dssp HHHHHHHHCCCC-
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999997
No 2
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=100.00 E-value=1.2e-40 Score=264.88 Aligned_cols=155 Identities=30% Similarity=0.588 Sum_probs=140.5
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 6787079829997967788499679999604777654468888776555430244-333058876514333330577777
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT-GTLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~-~~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
..+||+|+|++| ++++++|+|||++|+|||||||++||.++++|++++++++++ ..++++++||+||+||||++|++|
T Consensus 15 ~~~dF~L~d~~G-~~~l~d~~Gk~~vl~F~yt~Cp~~Cp~~~~~l~~~~~~l~~~~~~~v~~l~isvDP~~Dtp~~l~~y 93 (172)
T 2k6v_A 15 KPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRY 93 (172)
T ss_dssp EECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHH
T ss_pred CCCCEEEECCCC-CEEHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf 789838987999-8956996998899999888899858799999998876533313664589970488354617799998
Q ss_pred HHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--CCCHHHHHHHHH
Q ss_conf 531368642245898898988886090886225655677775258742069998589829998578--988899999999
Q gi|254780281|r 114 VQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--KDDSDSAIEKIN 191 (201)
Q Consensus 114 ~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--~~~~~~i~~~i~ 191 (201)
++.|+++|++|||+.+++++++++||++|.+..... +..|+++|++.+||+| +|+++++|.+ ..++++++++|+
T Consensus 94 ~~~~~~~~~~ltg~~~~i~~v~~~~gv~~~~~~~~~---~~~y~i~Hs~~~~Lid-~G~~~~~~~~~~~~~~~~i~~dl~ 169 (172)
T 2k6v_A 94 AKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRG---PGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQ 169 (172)
T ss_dssp HHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEE---TTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCC---CCCCEEECCEEEEEEC-CCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 876188745655999999999997294798346789---9974586634699985-993999986898868999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780281|r 192 RLI 194 (201)
Q Consensus 192 ~ll 194 (201)
.||
T Consensus 170 ~LL 172 (172)
T 2k6v_A 170 ALL 172 (172)
T ss_dssp HCC
T ss_pred HHC
T ss_conf 869
No 3
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal- kingston bacterial structural genomics initiative; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=100.00 E-value=1.5e-35 Score=234.13 Aligned_cols=154 Identities=24% Similarity=0.357 Sum_probs=133.2
Q ss_pred CCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 66787079829997967788499679999604777654468888776555430244333058876514333330577777
Q gi|254780281|r 34 RFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 34 ~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
...++|+|+|++|+.+++++|+|||++|+|||||||++||.++..|+++++++.+.+.++++++||+||+|||||.+++|
T Consensus 11 ~~~p~F~L~d~~G~~vsl~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~l~~~~~~v~~v~is~Dp~~Dtpe~l~~y 90 (174)
T 1xzo_A 11 YEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKF 90 (174)
T ss_dssp EECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHH
T ss_pred CCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 80698588849959975899799889999877878986767876766666640354432789842355456749999999
Q ss_pred HHHCC---CCEECCCC-CHHHHHHHH-HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC--CCHHHH
Q ss_conf 53136---86422458-988989888-860908862256556777752587420699985898299985789--888999
Q gi|254780281|r 114 VQRFS---DRIIGISG-DPIDVMRVA-KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK--DDSDSA 186 (201)
Q Consensus 114 ~~~~~---~~~~~ltg-~~~~i~~l~-~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~--~~~~~i 186 (201)
++.++ ++|++||| +.+.+..++ +.|++++... ...|.+.|++.+|||||+|++++.|.+. .+.+++
T Consensus 91 ~~~~~~~~~~w~~lt~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~H~~~~~lId~~G~i~~~~~g~~~~~~~~l 163 (174)
T 1xzo_A 91 AANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKP-------EGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDI 163 (174)
T ss_dssp HTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCC-------SSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHH
T ss_pred HHHCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEECC-------CCCCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHH
T ss_conf 9973999889558546558889999985121577536-------888606755689999799809999868989999999
Q ss_pred HHHHHHHH
Q ss_conf 99999998
Q gi|254780281|r 187 IEKINRLI 194 (201)
Q Consensus 187 ~~~i~~ll 194 (201)
+++|+.+-
T Consensus 164 ~~dik~~~ 171 (174)
T 1xzo_A 164 ISDVKSAS 171 (174)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
T ss_conf 99999887
No 4
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=100.00 E-value=2.6e-33 Score=220.56 Aligned_cols=161 Identities=25% Similarity=0.510 Sum_probs=147.3
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEEEECCCCCCHHHHHH
Q ss_conf 67870798299979677884996799996047776544688887765554302443--3305887651433333057777
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTG--TLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~--~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+++||+|+|++|+++++++|+|||+||+|+||+||++|+..+..++++++++.+.+ ..++++++++||++|+++.++.
T Consensus 2 ~g~dF~L~d~~G~~vsl~d~kGK~~lv~f~~t~C~~~c~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~d~~~~~~~ 81 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIAN 81 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHH
T ss_pred CCCCCEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHH
T ss_conf 46880898199599758996999899998784599878751045666776640235432157755036776556999999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 75313686422458988989888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
|.+.++++|+.+++..+....+++.|++........ ...+|.++|++.+|||||+|+++++|+...++++++++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~H~~~~~LID~~G~i~~~~~~~~~~~~i~~~i~~ 158 (164)
T 2ggt_A 82 YVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKD---EDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEEC---TTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC---CCCCCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 986128875324573677999999708645603577---88872676653899994998599997999998999999999
Q ss_pred HHHHCC
Q ss_conf 985143
Q gi|254780281|r 193 LITYGN 198 (201)
Q Consensus 193 ll~~~~ 198 (201)
+|++.+
T Consensus 159 ~L~~~~ 164 (164)
T 2ggt_A 159 HMRPYR 164 (164)
T ss_dssp HHGGGC
T ss_pred HHHHHC
T ss_conf 987319
No 5
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.98 E-value=3.1e-31 Score=208.03 Aligned_cols=161 Identities=26% Similarity=0.551 Sum_probs=145.8
Q ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 7870798299979677884996799996047776544688887765554302443--33058876514333330577777
Q gi|254780281|r 36 NSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTG--TLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 36 ~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~--~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
.+||+|+|++|+++++++|+|||+||+|||||||++||..+..|.++++++...+ ..+.++.++.++++|+++....+
T Consensus 6 ~gDF~L~d~~G~~vsl~dl~GK~vvl~F~~t~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (171)
T 2rli_A 6 QGDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARY 85 (171)
T ss_dssp CSCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHH
T ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 58969984994997789969998999998379998560667878999998621135675248764023346748888777
Q ss_pred HHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 53136864224589889898888609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 114 VQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 114 ~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
...+..+|.++++.......+++.|+++....... ...+|.++|++.+|||||+|+++++|+...++++++++|++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~H~~~~~LID~~G~i~~~~~~~~~~~~i~~~i~~l 162 (171)
T 2rli_A 86 VQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKD---EDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCC---SSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCC---CCCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 75137420255464888899997506266512467---777406621206999979984999979999999999999999
Q ss_pred HHHCCC
Q ss_conf 851433
Q gi|254780281|r 194 ITYGNV 199 (201)
Q Consensus 194 l~~~~~ 199 (201)
|++=+-
T Consensus 163 La~~~~ 168 (171)
T 2rli_A 163 MAAFRS 168 (171)
T ss_dssp HHHHCC
T ss_pred HHHHHH
T ss_conf 998787
No 6
>3me7_A Putative uncharacterized protein; electron transfer protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.97 E-value=4e-30 Score=201.33 Aligned_cols=156 Identities=20% Similarity=0.281 Sum_probs=137.0
Q ss_pred CCCC-CEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 6678-707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 34 RFNS-DVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 34 ~~~~-~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
...| ||+|+|++|+++++++|+|||+||+|+||+||++||.+++.|.++++++.+.+..+.++++++||+ |+++.+++
T Consensus 5 ~~~P~DFtl~d~~G~~vsLsd~~Gk~vll~f~~t~C~~~C~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-~~~~~~~~ 83 (170)
T 3me7_A 5 TYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPK-DTLEDIKR 83 (170)
T ss_dssp CBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTT-CCHHHHHH
T ss_pred CCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CCHHHHHH
T ss_conf 72899879985998997189969987999997345566560888887988986412565147887227854-48699999
Q ss_pred HHHHCC---CCEECCCC-CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC-CCCCHHHHH
Q ss_conf 753136---86422458-9889898888609088622565567777525874206999858982999857-898889999
Q gi|254780281|r 113 FVQRFS---DRIIGISG-DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP-YKDDSDSAI 187 (201)
Q Consensus 113 y~~~~~---~~~~~ltg-~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~-~~~~~~~i~ 187 (201)
|++.+. +.|.++++ +.+++.+++++||+.+... .+.+.|++.+|||||+|+++.++. ...+++++.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~---------~~~~~h~~~~~LId~~G~i~~~~~G~~~~~~~l~ 154 (170)
T 3me7_A 84 FQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA---------GNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp HHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEE---------TTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred HHHHHCCCCCCCEECCCCCHHHHHHHHHHCCEEEECC---------CCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHH
T ss_conf 9998386545512004788999999999769478547---------8850245689999799969999848899999999
Q ss_pred HHHHHHHHHCCC
Q ss_conf 999999851433
Q gi|254780281|r 188 EKINRLITYGNV 199 (201)
Q Consensus 188 ~~i~~ll~~~~~ 199 (201)
++|+.++.+|.-
T Consensus 155 ~~i~~~~~eg~~ 166 (170)
T 3me7_A 155 NALRLARGEGHH 166 (170)
T ss_dssp HHHHHHTTCSCT
T ss_pred HHHHHHHHCCCC
T ss_conf 999999808876
No 7
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=165.68 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=112.6
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC----CCCCHHHHHH
Q ss_conf 870798299979677884996799996047776544688887765554302443330588765143----3333057777
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP----KRDTPEVMKK 112 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP----~rDt~e~l~~ 112 (201)
.||+|+|++|++++|++|+||++||+||+|||| .|+.+++.|+++++++++. .+++++|++|. +.++.+.+++
T Consensus 28 ~DFsl~D~dG~~vsLsdfkGKvvli~F~at~Cp-~C~~e~~~L~~l~~~~~~~--~~~vl~v~~d~~~~~e~~~~~~~~~ 104 (183)
T 2obi_A 28 HEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCG-KTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKE 104 (183)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHH
T ss_pred ECCEEECCCCCEECHHHCCCCEEEEEEECCCCC-CCHHHHHHHHHHHHHHCCC--CEEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 242777799499608992998899999868994-8388999999875032037--8157753035444557887899877
Q ss_pred HHHHCCCCEECCCCCH---HHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 7531368642245898---8989888860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDP---IDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~---~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
|.+.++.+|..+.... .....+...+.. . ........+.|.|...+||||++|+++..|++..+|++|.++
T Consensus 105 f~~~~~~~f~~~~~~~~~g~~~~~~~~~l~~-----~-~~~~~~~~~~i~~npttfLID~~G~iv~ry~~~~~p~~ie~~ 178 (183)
T 2obi_A 105 FAAGYNVKFDMFSKICVNGDDAHPLWKWMKI-----Q-PKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 178 (183)
T ss_dssp HHHTTTCCSEEBCCCCCSSTTSCHHHHHHHT-----S-TTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTT
T ss_pred HHHCCCCCCCEEEEEEECCCCCCHHHHHHHH-----C-CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHH
T ss_conf 6530264552355775137405776887754-----2-566676788756053799998999699897999998999998
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780281|r 190 INRL 193 (201)
Q Consensus 190 i~~l 193 (201)
|++.
T Consensus 179 Ikky 182 (183)
T 2obi_A 179 LPHY 182 (183)
T ss_dssp SGGG
T ss_pred HHHH
T ss_conf 8855
No 8
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidoreductase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.89 E-value=2e-24 Score=166.91 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=107.0
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE-ECCCCCCHHHHHHH
Q ss_conf 67870798299979677884996799996047776544688887765554302443330588765-14333330577777
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFIT-VDPKRDTPEVMKKF 113 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Is-vDP~rDt~e~l~~y 113 (201)
-.+||+|+|++|+++++++|+|||++|+||+|||| .|...++.|.++++++.+.+. .++.++ .++..+.++..+++
T Consensus 25 ~~~dF~~~d~~G~~~~L~~~kGKvvli~f~as~C~-~c~~~~~~l~~l~~~y~~~~~--~v~~~~~~~~~~~e~~~~~ei 101 (187)
T 3dwv_A 25 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCG-YTKGGYETATTLYNKYKSQGF--TVLAFPSNQFGGQEPGNEEEI 101 (187)
T ss_dssp SGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCS-CCTTHHHHHHHHHHHHGGGTC--EEEEEEBCCCSSCSSSBTTHH
T ss_pred CCCCEEEECCCCCEECHHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCC--EEEECCCCCCCCCCCCHHHHH
T ss_conf 71321667799699638993998899999678897-848889999999998501453--122012333323564339999
Q ss_pred HHHC----CCCEEC-----CCCCH-HHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCH
Q ss_conf 5313----686422-----45898-8989888860908862256556777752587420699985898299985789888
Q gi|254780281|r 114 VQRF----SDRIIG-----ISGDP-IDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDS 183 (201)
Q Consensus 114 ~~~~----~~~~~~-----ltg~~-~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~ 183 (201)
.+.+ ...+.. ..|.. .....+... ........|.|.|....||||++|+++..|.+..++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~----------~~~~~~~~~~i~~~p~~fLIDk~Gkiv~r~~~~~~~ 171 (187)
T 3dwv_A 102 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKK----------TKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASV 171 (187)
T ss_dssp HHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHH----------HSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCH
T ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHH----------CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCH
T ss_conf 9998751465420245553057545778999987----------278873243234488599996999789886999998
Q ss_pred HHHHHHHHHHHHHCCC
Q ss_conf 9999999999851433
Q gi|254780281|r 184 DSAIEKINRLITYGNV 199 (201)
Q Consensus 184 ~~i~~~i~~ll~~~~~ 199 (201)
++|.++|++||+++++
T Consensus 172 ~~i~~~I~~lL~~~k~ 187 (187)
T 3dwv_A 172 KDIEEKLIPLLGSARL 187 (187)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHCCC
T ss_conf 9999999999976539
No 9
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide, structural genomics; 1.90A {Homo sapiens}
Probab=99.89 E-value=7.2e-23 Score=157.53 Aligned_cols=149 Identities=14% Similarity=0.047 Sum_probs=114.1
Q ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC----CHHHHH
Q ss_conf 7870798299979677884996799996047776544688887765554302443330588765143333----305777
Q gi|254780281|r 36 NSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD----TPEVMK 111 (201)
Q Consensus 36 ~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD----t~e~l~ 111 (201)
..||+|+|.+|+.+++++|+||++||+||+|||| .|+.+++.|+++++++++.+ +++++|++|...+ +...++
T Consensus 29 ~~DFsl~D~dG~~vsLsdfkGKvvlv~fwat~C~-~C~~~~p~L~~l~~kyk~~g--~~vl~i~~d~~~~~~~~~~~~~~ 105 (185)
T 2gs3_A 29 MHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGG-KTEVNYTQLVDLHARYAECG--LRILAFPCNQFGKQEPGSNEEIK 105 (185)
T ss_dssp GGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCHHHHH
T ss_pred CCCCEEECCCCCEEEHHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHHCCC--EEEEEEECCCCCCCCCCCHHHHH
T ss_conf 2155767799599728992998899998688898-85899999999999851068--07998613643355888888987
Q ss_pred HHHHHCCCCEECCCCCH---HHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 77531368642245898---898988886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 112 KFVQRFSDRIIGISGDP---IDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 112 ~y~~~~~~~~~~ltg~~---~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
.|...++..|..+.... .....+...+.... .......+.|.|....||||++|+++..|++..+|++|.+
T Consensus 106 ~f~~~~~~~fp~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~g~~i~~npt~fLIDk~G~iv~r~~~~~~p~~ie~ 179 (185)
T 2gs3_A 106 EFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP------KGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 179 (185)
T ss_dssp HHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSG------GGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGG
T ss_pred HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCC------CCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHH
T ss_conf 6664307766337888741743463366665415------6667678875635579999899979989799999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780281|r 189 KINRL 193 (201)
Q Consensus 189 ~i~~l 193 (201)
+|++.
T Consensus 180 ~Ikky 184 (185)
T 2gs3_A 180 DLPHY 184 (185)
T ss_dssp GHHHH
T ss_pred HHHHH
T ss_conf 88855
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.87 E-value=1.9e-23 Score=161.09 Aligned_cols=150 Identities=13% Similarity=0.148 Sum_probs=109.3
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC----CCCCCHHHH
Q ss_conf 6787079829997967788499679999604777654468888776555430244333058876514----333330577
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD----PKRDTPEVM 110 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD----P~rDt~e~l 110 (201)
-.+||+++|.+|++++|++|+||++||+||+|||| .|..+++.|.++++++.+++ +.++.++++ .+.++.+.+
T Consensus 27 ~~~DFt~~d~~G~~v~Lsd~kGKvvli~f~as~C~-~c~~~~~~l~~l~~~y~~~g--~~vv~i~~~~~~~~~~~~~~ei 103 (190)
T 2vup_A 27 SIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCG-YTKGGYETATTLYNKYKSQG--FTVLAFPCNQFGGQEPGNEEEI 103 (190)
T ss_dssp SGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSST-THHHHHHHHHHHHHHHGGGT--CEEEEEECCCSTTCCCSCHHHH
T ss_pred CCCCEEEECCCCCEECHHHCCCCEEEEEEEECCCC-CHHHHHHHHHHHHHHHHCCC--CEEEEECCCCCCCCCCCCHHHH
T ss_conf 62540666799499648992998899999715899-84777999999999861157--6356301220024688989999
Q ss_pred HHHHHHCCCCEEC------CCCCHH-HHHH-HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCC
Q ss_conf 7775313686422------458988-9898-8886090886225655677775258742069998589829998578988
Q gi|254780281|r 111 KKFVQRFSDRIIG------ISGDPI-DVMR-VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDD 182 (201)
Q Consensus 111 ~~y~~~~~~~~~~------ltg~~~-~i~~-l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~ 182 (201)
+++.+.....+.. +.|... .... +.++.+- ....+.+.|+...||||++|+++..|.+..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~-----------~~~~~~i~~n~t~fLIDkdG~Vv~~~~~~~~ 172 (190)
T 2vup_A 104 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPG-----------ILKTKAIKWNFTSFLIDRDGVPVERFSPGAS 172 (190)
T ss_dssp HHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCC-----------GGGCCSCCSTTCEEEECTTSCEEEEECTTCC
T ss_pred HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCC-----------CCCCCCCCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 99987415753202356874263247788889875589-----------7657766548879999799848988699999
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 8999999999985143
Q gi|254780281|r 183 SDSAIEKINRLITYGN 198 (201)
Q Consensus 183 ~~~i~~~i~~ll~~~~ 198 (201)
++++.++|++||++++
T Consensus 173 ~~~l~~~I~~lLk~~~ 188 (190)
T 2vup_A 173 VKDIEKKLIPLLESTQ 188 (190)
T ss_dssp HHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 6999999999999875
No 11
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.87 E-value=1.7e-23 Score=161.27 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=101.8
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE-ECCCCCCHHHHHHHHH
Q ss_conf 870798299979677884996799996047776544688887765554302443330588765-1433333057777753
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFIT-VDPKRDTPEVMKKFVQ 115 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Is-vDP~rDt~e~l~~y~~ 115 (201)
.||+|+|++|+++++++|+|||+||+||+|||| .|+..++.+.++++.+...+. .++.++ .++..+......++.+
T Consensus 12 ~dFsl~d~~Gk~vsL~d~kGKvvlv~f~~t~Cp-~c~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 88 (169)
T 2v1m_A 12 YEFTVKDINGVDVSLEKYRGHVCLIVNVACKCG-ATDKNYRQLQEMHTRLVGKGL--RILAFPCNQFGGQEPWAEAEIKK 88 (169)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGGTE--EEEEEECCCSTTCCCSCHHHHHH
T ss_pred CCCEEECCCCCEECHHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCCC--EEEEEEECCCCCCCCCHHHHHHH
T ss_conf 032667799399158993998899998178898-857878999987765302433--03665302244300101889988
Q ss_pred H----CCCCEECCCC------CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHH
Q ss_conf 1----3686422458------98898988886090886225655677775258742069998589829998578988899
Q gi|254780281|r 116 R----FSDRIIGISG------DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDS 185 (201)
Q Consensus 116 ~----~~~~~~~ltg------~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~ 185 (201)
. ....+..... .........+.. ......|.+.|+..+||||++|+++..|++..+|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~LID~~G~vv~~~~~~~~p~~ 157 (169)
T 2v1m_A 89 FVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSR-----------QHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYD 157 (169)
T ss_dssp HHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHH-----------SCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGG
T ss_pred HHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHC-----------CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHH
T ss_conf 766236866542001232144457133201211-----------677657654317779999799949999799999899
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999998514
Q gi|254780281|r 186 AIEKINRLITYG 197 (201)
Q Consensus 186 i~~~i~~ll~~~ 197 (201)
++++|++||++.
T Consensus 158 l~~~I~~lL~ek 169 (169)
T 2v1m_A 158 IEGDIMELLEKK 169 (169)
T ss_dssp GHHHHHHHHHCC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999997649
No 12
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum}
Probab=99.87 E-value=5.7e-21 Score=146.06 Aligned_cols=142 Identities=18% Similarity=0.137 Sum_probs=117.3
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+...|+|+|+|.+|+.+++++++||+++++||.+||| .|..+++.|+++++.+.+. ++.+++|++| |+++.+++
T Consensus 11 p~paPdf~l~~~~g~~~~l~~~~Gk~vvl~F~~~~C~-~C~~~~~~l~~~~~~~~~~--~v~~v~v~~d---~~~~~~~~ 84 (165)
T 3or5_A 11 PTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCP-PCRSEIPDMVQVQKTWASR--GFTFVGIAVN---EQLPNVKN 84 (165)
T ss_dssp CCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSH-HHHHHHHHHHHHHHHHTTT--TEEEEEEECS---CCHHHHHH
T ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEEECCCC-CCCCCCCHHHHCCCCCCCC--CEEEEECCCC---HHHHHHHH
T ss_conf 9899983867899699829997999799999917999-7121270344101233331--0157621221---03799999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHH--HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 75313686422458988989888--8609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVA--KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~--~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
|++.++.+|..+..+.+...... ..+++ ...+.+||||++|+++..+.+..+.+++.+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------------------~~~P~~~iId~~G~I~~~~~G~~~~~~l~~~i 146 (165)
T 3or5_A 85 YMKTQGIIYPVMMATPELIRAFNGYIDGGI------------------TGIPTSFVIDASGNVSGVIVGPRSKADFDRIV 146 (165)
T ss_dssp HHHHHTCCSCEEECCHHHHHHHHTTSTTCS------------------CSSSEEEEECTTSBEEEEECSCCCHHHHHHHH
T ss_pred HHHHHCCCCCEEECCHHHHHHHHHHHHCCC------------------CCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
T ss_conf 999959987278618889887666765384------------------42467999989997999996999999999999
Q ss_pred HHHHHHCC
Q ss_conf 99985143
Q gi|254780281|r 191 NRLITYGN 198 (201)
Q Consensus 191 ~~ll~~~~ 198 (201)
+.+|+...
T Consensus 147 ~~~l~~~a 154 (165)
T 3or5_A 147 KMALGAKA 154 (165)
T ss_dssp HHHHC---
T ss_pred HHHHCCCC
T ss_conf 99718877
No 13
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB structural genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis H37RV}
Probab=99.86 E-value=3.2e-21 Score=147.60 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=117.3
Q ss_pred CCCCEE-----EECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC--CCCCCH
Q ss_conf 678707-----9829997967788499679999604777654468888776555430244333058876514--333330
Q gi|254780281|r 35 FNSDVH-----LVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD--PKRDTP 107 (201)
Q Consensus 35 ~~~~f~-----L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD--P~rDt~ 107 (201)
.+|+|+ |.+.+|+++++++|+||+++|+||.|||| .|..+++.|.++++++++. .+.++.|++| +..+++
T Consensus 56 ~AP~f~~~~~wlnt~~Gk~v~L~d~kGKvVll~FwatwC~-~C~~elp~L~~l~~~y~d~--gl~vv~v~~d~~~~e~~~ 132 (352)
T 2hyx_A 56 TAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCI-NCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVP 132 (352)
T ss_dssp BCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCH
T ss_pred CCCCCCCCCCCCCCCCCCEECHHHHCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHCCCC--CEEEEEEECCCCHHHHHH
T ss_conf 8979867765326889989649993999699999989798-6999999999999870047--389999957873022139
Q ss_pred HHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHH
Q ss_conf 57777753136864224589889898888609088622565567777525874206999858982999857898889999
Q gi|254780281|r 108 EVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAI 187 (201)
Q Consensus 108 e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~ 187 (201)
+.+++|++.++-.|+.+..... .+++.|++.. .+.+||||++|+++..+.+..+.+++.
T Consensus 133 ~~v~~~~~~~~i~~pv~~D~~~---~i~~~y~v~~------------------~P~~~lID~~G~i~~~~~G~~~~~~le 191 (352)
T 2hyx_A 133 GNVAKGAANLGISYPIALDNNY---ATWTNYRNRY------------------WPAEYLIDATGTVRHIKFGEGDYNVTE 191 (352)
T ss_dssp HHHHHHHHHHTCCSCEEECTTS---HHHHHTTCCE------------------ESEEEEECTTSBEEEEEESBCCHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCH---HHHHHCCCCE------------------EEEEEEECCCCEEEEEEECCCCHHHHH
T ss_conf 9999999981998763347708---9999849976------------------546999899987999993789989999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999985143
Q gi|254780281|r 188 EKINRLITYGN 198 (201)
Q Consensus 188 ~~i~~ll~~~~ 198 (201)
+.|++||++..
T Consensus 192 ~~I~~LL~e~~ 202 (352)
T 2hyx_A 192 TLVRQLLNDAK 202 (352)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHCC
T ss_conf 99999986558
No 14
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, cytoplasm, oxidoreductase, peroxidase, redox-active center; 2.02A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.7e-22 Score=155.30 Aligned_cols=148 Identities=17% Similarity=0.139 Sum_probs=98.0
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC---CC-CHHHHHH
Q ss_conf 8707982999796778849967999960477765446888877655543024433305887651433---33-3057777
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPK---RD-TPEVMKK 112 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~---rD-t~e~l~~ 112 (201)
.||+|+|++|+++++++|+||+++|+||+||||. |...++ +.+.+.+..+++ ...++++++++. +| +++.++.
T Consensus 13 ydFtl~d~~G~~vsLsd~kGKvvll~F~at~C~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (171)
T 3cmi_A 13 YKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGF-TPQYKE-LEALYKRYKDEG-FTIIGFPCNQFGHQEPGSDEEIAQF 89 (171)
T ss_dssp GGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCC-HHHHHH-HHHHHHHHGGGT-EEEEEEEECSCC-------------
T ss_pred ECCEEECCCCCEECHHHCCCCEEEEEEEECCCCC-CCCCHH-HHHHHHHHHCCC-CCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 1566588992995389939988999999789988-211638-999888755048-7235553355577588987999987
Q ss_pred HHHHCCCCEECCCCCH------HHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHH
Q ss_conf 7531368642245898------8989888860908862256556777752587420699985898299985789888999
Q gi|254780281|r 113 FVQRFSDRIIGISGDP------IDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSA 186 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~------~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i 186 (201)
|...++..+..+.... ......... ........|.+.|++.+||||++|+++.+|.+..+++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~p~~fLID~~G~iv~~~~~~~~~~~l 159 (171)
T 3cmi_A 90 CQLNYGVTFPIMKKIDVNGGNEDPVYKFLKS----------QKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSL 159 (171)
T ss_dssp -----CCCSCBBCCCBSSSTTBCHHHHHHHH----------HSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGG
T ss_pred HHHHCCCCCCEEEEEEECCEEEHHHHHHHHH----------HCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHH
T ss_conf 7874299873677862024020111334554----------134654235424555399998999699997999999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998514
Q gi|254780281|r 187 IEKINRLITYG 197 (201)
Q Consensus 187 ~~~i~~ll~~~ 197 (201)
.++|++||++-
T Consensus 160 ~~~I~~lL~ei 170 (171)
T 3cmi_A 160 SETIEELLKEV 170 (171)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHHHC
T ss_conf 99999999721
No 15
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.85 E-value=9e-21 Score=144.89 Aligned_cols=144 Identities=15% Similarity=0.132 Sum_probs=112.8
Q ss_pred CCCCCCEEEECC--CCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC----CCEEEEEEEECCCCCC
Q ss_conf 666787079829--9979677884996799996047776544688887765554302443----3305887651433333
Q gi|254780281|r 33 RRFNSDVHLVAQ--DGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTG----TLLNAYFITVDPKRDT 106 (201)
Q Consensus 33 ~~~~~~f~L~d~--~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~----~~v~~v~IsvDP~rDt 106 (201)
....|+|++.+. +|+++++++++||+++|+||+|||| .|..+++.|.++++++.+.+ ..+.++.++. ..++
T Consensus 34 ~~~~p~~~~~~l~~dG~~vsL~~~~GK~vvl~FwatwC~-~C~~e~p~l~~l~~~~~~~~~~~~~~~~vi~v~~--~d~~ 110 (183)
T 3lwa_A 34 RQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCA-PCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV--RDYS 110 (183)
T ss_dssp CCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC--SCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC--CCCH
T ss_conf 499998647763679979869995999799999989888-4999989999999999874146678769997404--5430
Q ss_pred HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHH
Q ss_conf 05777775313686422458988989888860908862256556777752587420699985898299985789888999
Q gi|254780281|r 107 PEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSA 186 (201)
Q Consensus 107 ~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i 186 (201)
++.+++|++.++-+|..+..+...+......++ +...+.+||||++|+++..+.+..+.+++
T Consensus 111 ~~~~~~~~~~~~~~~p~~~D~~~~~~~~~~~~~------------------~~~iP~~~liD~~G~i~~~~~G~~~~~~l 172 (183)
T 3lwa_A 111 RDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVP------------------ASVIPTTIVLDKQHRPAAVFLREVTSKDV 172 (183)
T ss_dssp HHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCC------------------TTCCSEEEEECTTSCEEEEECSCCCHHHH
T ss_pred HHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCC------------------CCCCCEEEEECCCCEEEEEEECCCCHHHH
T ss_conf 367888999729986189889655999835688------------------68317699998999899999489998999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998514
Q gi|254780281|r 187 IEKINRLITYG 197 (201)
Q Consensus 187 ~~~i~~ll~~~ 197 (201)
.+.|+.||+++
T Consensus 173 ~~~i~~ll~ea 183 (183)
T 3lwa_A 173 LDVALPLVDEA 183 (183)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHCC
T ss_conf 99999998459
No 16
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.84 E-value=5.8e-20 Score=140.02 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=109.5
Q ss_pred CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 66666787079829997967788499679999604777654468888776555430244333058876514333330577
Q gi|254780281|r 31 GNRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 31 ~~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
..+...|+|+|+|++|+.+++++|+||+++|+||++||| .|..+++.+.++++.+.. .++++++|++|+ ++++.+
T Consensus 35 ~~~~~~Pdf~l~~~~G~~~~L~d~~GK~vvl~F~a~~C~-~C~~~~~~l~~l~~~~~~--~~~~vv~is~d~--~~~~~~ 109 (186)
T 1jfu_A 35 SAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCV-PCRKEMPALDELQGKLSG--PNFEVVAINIDT--RDPEKP 109 (186)
T ss_dssp CSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHHCB--TTEEEEEEECCC--SCTTHH
T ss_pred CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCC-CHHHHHHHHHHHHHCCCC--CCEEEEECCCCC--CCHHHH
T ss_conf 689779984878999599719996999699999899683-668885766532100123--100022034345--899999
Q ss_pred HHHHHHCCCCEE-CCCCCHHHHH-HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--CCCHHHH
Q ss_conf 777531368642-2458988989-88886090886225655677775258742069998589829998578--9888999
Q gi|254780281|r 111 KKFVQRFSDRII-GISGDPIDVM-RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--KDDSDSA 186 (201)
Q Consensus 111 ~~y~~~~~~~~~-~ltg~~~~i~-~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--~~~~~~i 186 (201)
++|++.++..+. .+......+. .+...+++ ...+.+||||++|+++..+.+ ..+.+++
T Consensus 110 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~------------------~~~P~~~lID~~G~Iv~~~~G~~~~~~~e~ 171 (186)
T 1jfu_A 110 KTFLKEANLTRLGYFNDQKAKVFQDLKAIGRA------------------LGMPTSVLVDPQGCEIATIAGPAEWASEDA 171 (186)
T ss_dssp HHHHHHTTCCTTCCEECTTCHHHHHHHTTTCC------------------SSSSEEEEECTTSBEEEEEESCCCTTSHHH
T ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHCCC------------------CCCCEEEEECCCCEEEEEEECCCCCCHHHH
T ss_conf 99999819987537667632799999876576------------------745779999899989999979899986999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999985143
Q gi|254780281|r 187 IEKINRLITYGN 198 (201)
Q Consensus 187 ~~~i~~ll~~~~ 198 (201)
.+.|+.|+.+..
T Consensus 172 ~~~i~~ll~~~a 183 (186)
T 1jfu_A 172 LKLIRAATGKAA 183 (186)
T ss_dssp HHHHHHHHC---
T ss_pred HHHHHHHHHHHH
T ss_conf 999999732141
No 17
>3cyn_A Probable glutathione peroxidase 8; thioredoxin fold, membrane, oxidoreductase, transmembrane, structural genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.84 E-value=2.4e-20 Score=142.34 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=96.8
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC---CCCHHHHHHH
Q ss_conf 8707982999796778849967999960477765446888877655543024433305887651433---3330577777
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPK---RDTPEVMKKF 113 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~---rDt~e~l~~y 113 (201)
.||+++|++|++++++||+|||+||+||+|||| .|...++.+.+.++.+.+.+ +.++.++.++. ..+.+....+
T Consensus 28 ~DFtl~d~~G~~vsLsdfkGKvvlv~f~aT~Cp-~c~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 104 (189)
T 3cyn_A 28 YAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQ-LTDRNYLGLKELHKEFGPSH--FSVLAFPCNQFGESEPRPSKEVES 104 (189)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHTTTS--EEEEEEEBSCSTTCCCSCHHHHHH
T ss_pred CCCEEECCCCCEECHHHCCCCEEEEEEECCCCC-CCCCCHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 465577799399518992998899999715899-84002099999998751331--454022332056666666577766
Q ss_pred H--HHCCCCEEC-----CCCCH-HHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHH
Q ss_conf 5--313686422-----45898-898988886090886225655677775258742069998589829998578988899
Q gi|254780281|r 114 V--QRFSDRIIG-----ISGDP-IDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDS 185 (201)
Q Consensus 114 ~--~~~~~~~~~-----ltg~~-~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~ 185 (201)
. ..+...+.. ..|.. .......+. ...+.+.|....||||++|++++.|++..+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~k~---------------~~~~~i~~~~~~fLID~~G~iv~~~~~~~~~~~ 169 (189)
T 3cyn_A 105 FARKNYGVTFPIFHKIKILGSEGEPAFRFLVD---------------SSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEV 169 (189)
T ss_dssp HHHHHHCCCSCBBCCBCCSSTTCCHHHHHHHH---------------HHTCCCSSTTCEEEECTTSCEEEEECTTSCGGG
T ss_pred HHHHCCCCCEECCCEEEEECCCCCHHHHHHHH---------------HCCCCCCCCCEEEEECCCCCEEEEECCCCCHHH
T ss_conf 65213453300122244306524778999986---------------158977726748999799989988699999899
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999851
Q gi|254780281|r 186 AIEKINRLITY 196 (201)
Q Consensus 186 i~~~i~~ll~~ 196 (201)
+.++|++||++
T Consensus 170 i~~dI~~LL~e 180 (189)
T 3cyn_A 170 IRPDIAALVRQ 180 (189)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 18
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.84 E-value=2.4e-21 Score=148.39 Aligned_cols=145 Identities=15% Similarity=0.220 Sum_probs=100.3
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC----CCCCHHHH
Q ss_conf 67870798299979677884996799996047776544688887765554302443330588765143----33330577
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP----KRDTPEVM 110 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP----~rDt~e~l 110 (201)
-.+||+|+|.+|+++++++|+||++||+||+|||| .|..+++.|.++++++++.+ +.+++|++|- +.++....
T Consensus 11 s~~dF~l~d~dG~~vsLsd~kGKvvll~fwatwC~-~c~~e~p~L~~l~~~~~~~g--~~v~~i~~~~~~~~e~~~~~~~ 87 (170)
T 2p5q_A 11 SVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCG-MTNSNYAEMNQLYEKYKDQG--LEILAFPCNQFGEEEPGTNDQI 87 (170)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGGT--EEEEEEECCTTTTCCCSCHHHH
T ss_pred CCCCCEEECCCCCEECHHHCCCCEEEEEEECCCCC-HHHHHHHHHHHHHHHCCCCC--CEEEEECCCCCCCCCCCHHHHH
T ss_conf 60342777799599728994998899998468783-27777899999864312467--2687402444345574157899
Q ss_pred HHHHHHC-CCCEE-----CCCC-CHHHHHHHH--HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC
Q ss_conf 7775313-68642-----2458-988989888--8609088622565567777525874206999858982999857898
Q gi|254780281|r 111 KKFVQRF-SDRII-----GISG-DPIDVMRVA--KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD 181 (201)
Q Consensus 111 ~~y~~~~-~~~~~-----~ltg-~~~~i~~l~--~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~ 181 (201)
.++.... ..... .+.+ ....+.... ...+.. .+.+.|....||||++|+++..|.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~t~fLIDk~G~iv~~~~~~~ 154 (170)
T 2p5q_A 88 TDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIF-------------GDDIQWNFAKFLVNKDGQVVDRYYPTT 154 (170)
T ss_dssp HHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTT-------------CSCCCSTTCEEEECTTSCEEEEECTTS
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCC-------------CCCCCCCCEEEEECCCCCEEEEECCCC
T ss_conf 9988763376412456786126667804766442123644-------------787665865999999995998979999
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 88999999999985
Q gi|254780281|r 182 DSDSAIEKINRLIT 195 (201)
Q Consensus 182 ~~~~i~~~i~~ll~ 195 (201)
+++++.++|++||.
T Consensus 155 ~~~~l~~~I~~lL~ 168 (170)
T 2p5q_A 155 SPLSLERDIKQLLE 168 (170)
T ss_dssp CGGGGHHHHHHHTT
T ss_pred CHHHHHHHHHHHHC
T ss_conf 98999999999875
No 19
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, TLPA-like family, PSI-2, protein structure initiative; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=1.2e-19 Score=138.18 Aligned_cols=141 Identities=17% Similarity=0.158 Sum_probs=112.0
Q ss_pred CCCCCCCCEEEECCCCCEECHHH--HCCCEEEEEEECCCCCCCCH--HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 66666787079829997967788--49967999960477765446--888877655543024433305887651433333
Q gi|254780281|r 31 GNRRFNSDVHLVAQDGTDFSLSS--LYIKPSIVFFGFTNCSAVCP--TTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDT 106 (201)
Q Consensus 31 ~~~~~~~~f~L~d~~G~~~~~~~--~~Gk~~li~F~~T~Cpd~Cp--~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt 106 (201)
......|+|+|.|.+|+.+++++ ++||+++|+||+|||| .|. ..++.|.++++++.++ ..+.+++|++| ++
T Consensus 6 ~vG~~aPdf~l~~~~G~~~~l~~~~~kgk~vll~F~atwC~-~C~~~~~~~~l~~l~~~~~~~-~~v~vi~is~d---~~ 80 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWND-SISQKQSNSELREIYKKYKKN-KYIGMLGISLD---VD 80 (150)
T ss_dssp STTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCC-CHHHHHHHHHHHHHHHHHTTC-SSEEEEEEECC---SC
T ss_pred CCCCCCCCEEEECCCCCEEECCHHHHCCCEEEEEEECCCCC-CCCCCCCCHHHHHHHHHHCCC-CCEEEEEEECC---CC
T ss_conf 68898888487889989885355770999899999877688-662210189999999974446-75489997669---99
Q ss_pred HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHH
Q ss_conf 05777775313686422458988989888860908862256556777752587420699985898299985789888999
Q gi|254780281|r 107 PEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSA 186 (201)
Q Consensus 107 ~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i 186 (201)
.+..++|.+.++.+|..+......-..+++.||+.. .+.+||||++|+++.. ....+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~------------------~P~~~lID~~G~Ii~~---~~~~~~l 139 (150)
T 3fw2_A 81 KQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYK------------------IPANILLSSDGKILAK---NLRGEEL 139 (150)
T ss_dssp HHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS------------------SSEEEEECTTSBEEEE---SCCHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCC------------------CCEEEEECCCCEEEEE---ECCHHHH
T ss_conf 899999999809975067516553368999849884------------------5889999899989999---7888998
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998514
Q gi|254780281|r 187 IEKINRLITYG 197 (201)
Q Consensus 187 ~~~i~~ll~~~ 197 (201)
.+.|++||.++
T Consensus 140 ~~~l~~ll~ea 150 (150)
T 3fw2_A 140 KKKIENIVEEA 150 (150)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHCC
T ss_conf 99999999559
No 20
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.83 E-value=1.1e-19 Score=138.26 Aligned_cols=143 Identities=13% Similarity=0.122 Sum_probs=111.8
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 8707982999796778849967999960-477765446888877655543024433305887651433333057777753
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQ 115 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~ 115 (201)
+||+|.+.+|++++|+||+|||+|++|+ ..||| .|+.++..+++.++++.+.+ ++++.||. |+++..++|++
T Consensus 32 ~~~~l~~~~G~~~sLsD~~GK~vVL~Fyp~~~tp-~C~~el~~~~~~~~~~~~~g--~~Vv~IS~----d~~~~~~~~~~ 104 (179)
T 3ixr_A 32 LNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTP-GSSTEGLEFNLLLPQFEQIN--ATVLGVSR----DSVKSHDSFCA 104 (179)
T ss_dssp HHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSH-HHHHHHHHHHHHHHHHHTTT--EEEEEEES----CCHHHHHHHHH
T ss_pred CCCEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHCCC--CEEEECCC----CCHHHHHHHHC
T ss_conf 4876476899898279979797999998999999-45899999998665553278--37985167----88888986403
Q ss_pred HCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC---CHHHHHHHHHH
Q ss_conf 136864224589889898888609088622565567777525874206999858982999857898---88999999999
Q gi|254780281|r 116 RFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD---DSDSAIEKINR 192 (201)
Q Consensus 116 ~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~---~~~~i~~~i~~ 192 (201)
.++.+|..|.... ..+++.||++........ ....+...+||||++|+|+..+.... .++++++.|+.
T Consensus 105 ~~~l~fpllsD~~---~~v~k~ygv~~~~~~~g~------~~~~~~R~tfvID~~G~I~~~~~~~~~~~~~eevL~~Lka 175 (179)
T 3ixr_A 105 KQGFTFPLVSDSD---AILCKAFDVIKEKTMYGR------QVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp HHTCCSCEEECTT---CHHHHHTTCEEEECCC--------CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred CCEEEEEEEECCC---CHHHHHCCCEECCCCCCC------CCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 6215787644798---538998497224443575------4575056799989999899988189988689999999986
Q ss_pred HHH
Q ss_conf 985
Q gi|254780281|r 193 LIT 195 (201)
Q Consensus 193 ll~ 195 (201)
+..
T Consensus 176 ~~~ 178 (179)
T 3ixr_A 176 HAE 178 (179)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 315
No 21
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, structural genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.82 E-value=4.6e-21 Score=146.63 Aligned_cols=140 Identities=17% Similarity=0.212 Sum_probs=94.2
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC-CC---CCCHHHHHH
Q ss_conf 87079829997967788499679999604777654468888776555430244333058876514-33---333057777
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD-PK---RDTPEVMKK 112 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD-P~---rDt~e~l~~ 112 (201)
.||+|+|++|+++++++|+||++||+||+|||| .|..+++.++++++++.+++ +.++.++.+ ++ .++......
T Consensus 30 yDFtl~d~dGk~vsLsdfkGKvvll~F~at~C~-~c~~~~~~l~~l~~~~~~~~--~~v~~i~~~~~~~~~~~~~~~~~~ 106 (181)
T 2p31_A 30 YDFKAVNIRGKLVSLEKYRGSVSLVVNVASECG-FTDQHYRALQQLQRDLGPHH--FNVLAFPCNQFGQQEPDSNKEIES 106 (181)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHHH
T ss_pred EEEEEECCCCCEECHHHCCCCEEEEEEECCCCC-CCHHHHHHHHHHCCCCCCCE--EEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 012666799599718994998899999688799-82576334443031344420--589984044302344334345554
Q ss_pred HHHH-CCC--CEEC---CCCCH-HHHHHH-HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHH
Q ss_conf 7531-368--6422---45898-898988-88609088622565567777525874206999858982999857898889
Q gi|254780281|r 113 FVQR-FSD--RIIG---ISGDP-IDVMRV-AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSD 184 (201)
Q Consensus 113 y~~~-~~~--~~~~---ltg~~-~~i~~l-~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~ 184 (201)
+... +.. .+.. +.|.. ..+... .+.. .+.+.|....||||++|++++.|.+..+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~----------------~~~~~~~~t~fLID~dGkiv~~~~~~~~~e 170 (181)
T 2p31_A 107 FARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTS----------------GKEPTWNFWKYLVAPDGKVVGAWDPTVSVE 170 (181)
T ss_dssp HHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHH----------------SCCCCSTTCEEEECTTSCEEEEECTTSCHH
T ss_pred HHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCC----------------CCCCCCCCEEEEECCCCCEEEEECCCCCHH
T ss_conf 5431246440011244225754570254565436----------------987663787999979993999979999989
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999985
Q gi|254780281|r 185 SAIEKINRLIT 195 (201)
Q Consensus 185 ~i~~~i~~ll~ 195 (201)
++.++|++||.
T Consensus 171 ~i~~~I~~LLK 181 (181)
T 2p31_A 171 EVRPQITALVR 181 (181)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHHHC
T ss_conf 99999999759
No 22
>2ywn_A Peroxiredoxin-like protein; redox protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Sulfolobus tokodaii} PDB: 3hjp_A
Probab=99.82 E-value=4.3e-19 Score=134.78 Aligned_cols=145 Identities=17% Similarity=0.140 Sum_probs=112.0
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 66667870798299979677884996799996047-77654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|+|++|+.+++++|+||+++|+||.+ +|| .|..++..+.+.+.++.+. .++++.||. |+++.+
T Consensus 6 iG~~aPdF~l~~~~G~~v~l~d~~gk~vvl~f~~~~~cp-~c~~~~~~~~~~~~~~~~~--~~~~i~v~~----d~~~~~ 78 (157)
T 2ywn_A 6 IGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQ-VCTKEMCTFRDSMAKFNQV--NAVVLGISV----DPPFSN 78 (157)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTCC-C-------CCCGGGGGTTC--SSEEEEEES----SCHHHH
T ss_pred CCCCCCCCEEECCCCCEECHHHHCCCEEEEEEEECCCCC-CCHHHHHHHHHHHHHHCCC--CCEEEEEEC----CCHHHH
T ss_conf 989997708388999997399989997999998226777-5123235676530001025--851355645----987999
Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC-----CCCCHHH
Q ss_conf 77753136864224589889898888609088622565567777525874206999858982999857-----8988899
Q gi|254780281|r 111 KKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP-----YKDDSDS 185 (201)
Q Consensus 111 ~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~-----~~~~~~~ 185 (201)
++|++..+-+|+.++.... .++++||+.+...... .+ .-+...+||||++|+++..+. ...+.++
T Consensus 79 ~~~~~~~~~~~~~l~D~~~---~~~~~~gv~~~~~~~~------~~-~~~~~~tfiID~~G~I~~~~~~~~~~~~~~~~e 148 (157)
T 2ywn_A 79 KAFKEHNKLNFTILSDYNR---EVVKKYNVAWEFPALP------GY-VLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDE 148 (157)
T ss_dssp HHHHHHTTCCSEEEECTTS---HHHHHTTCEEECTTST------TC-EEECEEEEEECTTSBEEEEEEESSTTCCCCHHH
T ss_pred HHHHHHHCCCEEEEEECHH---HHHHHCCCEECCCCCC------CC-CCCCCEEEEECCCCEEEEEEECCCCCCCCCHHH
T ss_conf 9999981998599981222---5799759643036677------86-522316999999998999998589889899999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780281|r 186 AIEKINRL 193 (201)
Q Consensus 186 i~~~i~~l 193 (201)
+.+.|+.|
T Consensus 149 i~~~lk~L 156 (157)
T 2ywn_A 149 IEKVVKSL 156 (157)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
T ss_conf 99999975
No 23
>2cx4_A Bacterioferritin comigratory protein; oxidoreductase, antioxidant enzyme, reactive oxygen species, thioredoxin fold, structural genomics; 2.30A {Aeropyrum pernix K1} SCOP: c.47.1.10 PDB: 2cx3_A
Probab=99.81 E-value=9.8e-19 Score=132.58 Aligned_cols=148 Identities=19% Similarity=0.224 Sum_probs=115.3
Q ss_pred CCCCCCCEEEECCCCCEECHHHH--CCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 66667870798299979677884--9967999960-47776544688887765554302443330588765143333305
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSL--YIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~--~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
.....|+|+|.|++|++++++++ +|||++++|+ .+||| .|+.+++.+++.++++.+. .+++++||. |+++
T Consensus 7 vG~~aP~f~l~~~~G~~v~l~d~~~~gk~vvl~f~~~~~cp-~C~~~~~~l~~~~~~~~~~--~~~vv~is~----d~~~ 79 (164)
T 2cx4_A 7 LGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSP-VCTKELCTFRDKMAQLEKA--NAEVLAISV----DSPW 79 (164)
T ss_dssp TTSBCCCCEECCTTSCCEEHHHHHTTSSCEEEEECSCTTCH-HHHHHHHHHHHTCTTTSTT--CCEEEEEES----SCHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHHHCCCCEEEEEEECCCCCC-CCCCCCCHHHHHHHHHHCC--CCEEEEECC----CCHH
T ss_conf 87989682869899988876997639998999980688796-8645054134321344126--847997326----8999
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC-----CCCCH
Q ss_conf 7777753136864224589889898888609088622565567777525874206999858982999857-----89888
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP-----YKDDS 183 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~-----~~~~~ 183 (201)
.+++|.+..+-.|..+..... .++++||++....... ..+ ....+||||++|+|+..+- ...+.
T Consensus 80 ~~~~~~~~~~~~~~~l~D~~~---~~~~~~gv~~~~~~~~-------~~~-~~~~tfvId~~G~I~~~~~~~~~~~~~~~ 148 (164)
T 2cx4_A 80 CLKKFKDENRLAFNLLSDYNR---EVIKLYNVYHEDLKGL-------KMV-AKRAVFIVKPDGTVAYKWVTDNPLNEPDY 148 (164)
T ss_dssp HHHHHHHHHTCSSEEEECTTS---HHHHHTTCEEEEETTE-------EEE-ECCEEEEECTTSBEEEEEECSSTTCCCCH
T ss_pred HHHHHHHHCCCCEEEEECCCC---CHHHHCCCCCCCCCCC-------CCC-CCCEEEEECCCCEEEEEEEECCCCCCCCH
T ss_conf 999887547732379886983---2698849532232366-------465-26789999699989999994898898899
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999998514
Q gi|254780281|r 184 DSAIEKINRLITYG 197 (201)
Q Consensus 184 ~~i~~~i~~ll~~~ 197 (201)
+++++.|++|+.+.
T Consensus 149 ~eil~~l~~l~~~~ 162 (164)
T 2cx4_A 149 DEVVREANKIAGEL 162 (164)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999986343
No 24
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Thermus thermophilus HB27}
Probab=99.81 E-value=1.4e-19 Score=137.78 Aligned_cols=137 Identities=19% Similarity=0.365 Sum_probs=111.1
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
....|+|+|+|.+|+.++++++ ||+++|+||+|||| .|..+++.|.+++++.+ +++++|+++++ |+++.+++
T Consensus 8 G~~aP~f~l~d~~G~~v~l~~~-~k~~vl~F~atwC~-~C~~~~p~l~~l~~~~~-----~~~~~v~~~~~-~~~~~~~~ 79 (154)
T 3ia1_A 8 GEPLPDFLLLDPKGQPVTPATV-SKPAVIVFWASWCT-VCKAEFPGLHRVAEETG-----VPFYVISREPR-DTREVVLE 79 (154)
T ss_dssp BEECCCCCEECTTSCEECTTTS-CSSEEEEEECTTCH-HHHHHHHHHHHHHHHHC-----CCEEEEECCTT-CCHHHHHH
T ss_pred CCCCCCEEEECCCCCEECHHHC-CCCEEEEEECCCCC-CHHHHHHHHHHHHCCCC-----CEEEEEEEECC-HHHHHHHH
T ss_conf 6988884888899899718996-99899999868885-46999998762112567-----43789986412-67999999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 75313686422458988989888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
|++.++.+|..++...+.-..+.+.|++. ..+.+|+||++|+++..+.+..+.+++.+.|..
T Consensus 80 ~~~~~~~~~p~~~~~~d~~~~~~~~~~v~------------------~~P~~~iiD~~G~I~~~~~G~~~~~~l~~~ll~ 141 (154)
T 3ia1_A 80 YMKTYPRFIPLLASDRDRPHEVAARFKVL------------------GQPWTFVVDREGKVVALFAGRAGREALLDALLL 141 (154)
T ss_dssp HHTTCTTEEECBCCSSCCHHHHHTTSSBC------------------SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHCCCCCCEEEECCCCCCHHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHH
T ss_conf 99980999627861468532589985988------------------068899998999899999589999999999999
Q ss_pred HHH
Q ss_conf 985
Q gi|254780281|r 193 LIT 195 (201)
Q Consensus 193 ll~ 195 (201)
.++
T Consensus 142 ~~a 144 (154)
T 3ia1_A 142 AGA 144 (154)
T ss_dssp TTC
T ss_pred HHH
T ss_conf 877
No 25
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.81 E-value=5e-19 Score=134.34 Aligned_cols=138 Identities=15% Similarity=0.203 Sum_probs=113.0
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+..+|+|+|+|.+|+.+++++++||+++|+||.+||| .|...++.++++++++.+. ++++++|+.| |+++.+++
T Consensus 3 G~~aPdf~l~~~dG~~v~l~~~~gk~~li~f~~~~C~-~C~~~~~~l~~~~~~~~~~--~~~vv~i~~d---~~~~~~~~ 76 (151)
T 2f9s_A 3 GSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCE-PCKKEFPYMANQYKHFKSQ--GVEIVAVNVG---ESKIAVHN 76 (151)
T ss_dssp CEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHHGGG--TEEEEEEEES---CCHHHHHH
T ss_pred CCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CCCCCCHHHHHHHHHHHCC--CCCCCCCCCC---CCHHHHHH
T ss_conf 7868886878899599859997999699999999999-8756770577888875324--7531255478---99999999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 75313686422458988989888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
|++.++.+|..+..... .+++.|++.. .+.+||||++|+++..+.+..+.+.+ +++.+
T Consensus 77 ~~~~~~~~~~~~~d~~~---~~~~~~~i~~------------------~P~~~liD~~G~i~~~~~G~~~~~~~-~~il~ 134 (151)
T 2f9s_A 77 FMKSYGVNFPVVLDTDR---QVLDAYDVSP------------------LPTTFLINPEGKVVKVVTGTMTESMI-HDYMN 134 (151)
T ss_dssp HHHHHTCCSCEEEETTS---HHHHHTTCCS------------------SCEEEEECTTSEEEEEEESCCCHHHH-HHHHH
T ss_pred HHHHCCCCCCCCCCCCH---HHHHHCCCCE------------------EEEEEEECCCCEEEEEEECCCCHHHH-HHHHH
T ss_conf 99981998554458637---7898739758------------------98999997999899999699999999-99999
Q ss_pred HHHHCC
Q ss_conf 985143
Q gi|254780281|r 193 LITYGN 198 (201)
Q Consensus 193 ll~~~~ 198 (201)
+|.++.
T Consensus 135 ~lk~~~ 140 (151)
T 2f9s_A 135 LIKPGE 140 (151)
T ss_dssp HHSCC-
T ss_pred HHHHHH
T ss_conf 998877
No 26
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreductase; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.81 E-value=5.6e-19 Score=134.06 Aligned_cols=148 Identities=14% Similarity=0.142 Sum_probs=111.5
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666678707982999796778849967999960-4777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
.+....+|+|.+++|++++++||+|||+|++|+ ..||| .|+.++..+++.++++.+.+ ++++.||+ |+++.+
T Consensus 11 ~~a~~~~~~l~~~~G~~~sL~d~~Gk~vVl~F~p~~~~p-~C~~e~~~l~~~~~~~~~~g--~~vi~is~----d~~~~~ 83 (163)
T 3gkn_A 11 LPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTP-GATTEGLDFNALLPEFDKAG--AKILGVSR----DSVKSH 83 (163)
T ss_dssp CCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSH-HHHHHHHHHHHHHHHHHHTT--CEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHCCC--EEEEECCC----CCHHHH
T ss_conf 899998447375999999618989896999996677798-62899999986556540477--28974036----578999
Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC---CHHHHH
Q ss_conf 77753136864224589889898888609088622565567777525874206999858982999857898---889999
Q gi|254780281|r 111 KKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD---DSDSAI 187 (201)
Q Consensus 111 ~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~---~~~~i~ 187 (201)
+.+.+.....+..+..... .+++.||++........ ........+|||||+|+|+..+.... ++++++
T Consensus 84 ~~~~~~~~~~~~~l~d~~~---~~~~~~gv~~~~~~~~~------~~~~~~~~tflID~~G~I~~~~~~~~~~~~~~~iL 154 (163)
T 3gkn_A 84 DNFCAKQGFAFPLVSDGDE---ALCRAFDVIKEKNMYGK------QVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVL 154 (163)
T ss_dssp HHHHHHHCCSSCEEECTTC---HHHHHTTCEEEEEETTE------EEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCHH---HHHHHHCCCCCCCCCCC------CCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHH
T ss_conf 9999972988664348327---89997194003554675------34555638999918998999981999786999999
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q gi|254780281|r 188 EKINRLIT 195 (201)
Q Consensus 188 ~~i~~ll~ 195 (201)
+.|+.+..
T Consensus 155 ~~lka~~k 162 (163)
T 3gkn_A 155 AALKAHAK 162 (163)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 99997535
No 27
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein structure initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.79 E-value=9.9e-19 Score=132.57 Aligned_cols=137 Identities=18% Similarity=0.189 Sum_probs=112.7
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHH
Q ss_conf 67870798299979677884996799996047776544688887765554302443330588765143333305777775
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFV 114 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~ 114 (201)
..|+|++.|++|+.+++++++||+++++|+.+||| .|-..++.+++++++..+. .+++++|++| .|+++.+++|.
T Consensus 7 ~aP~f~l~~~~G~~~~l~~~~gk~vll~f~~~~Cp-~C~~~~~~~~~l~~~~~~~--~~~~i~i~~~--~~~~~~~~~~~ 81 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCP-PCREEIPSMMRLNAAMAGK--PFRMLCVSID--EGGKVAVEEFF 81 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHTTTS--SEEEEEEECC--TTHHHHHHHHH
T ss_pred CCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CCCCCCCCHHHCCCCCCCC--CCCEEEEEEE--CCCHHHHHHHH
T ss_conf 39971857899699809995899799999267467-5222274022000222344--4310267540--37789999999
Q ss_pred HHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--CCCHHHHHHHHHH
Q ss_conf 31368642245898898988886090886225655677775258742069998589829998578--9888999999999
Q gi|254780281|r 115 QRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--KDDSDSAIEKINR 192 (201)
Q Consensus 115 ~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--~~~~~~i~~~i~~ 192 (201)
+.++.+|..+.+...+ +++.||+.. .+.+||||++|+++..+.+ ..+.+++.+.|+.
T Consensus 82 ~~~~~~~~~~~D~~~~---~~~~~~v~~------------------~P~~~lID~~G~I~~~~~G~~~~~~~e~~~~l~~ 140 (154)
T 3kcm_A 82 RKTGFTLPVLLDADKR---VGKLYGTTG------------------VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHCCCCCEEECTTCH---HHHHHTCCS------------------BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHCCCEEEEECCCHH---HHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 9819956787468527---999849881------------------6879999899999999989899987999999999
Q ss_pred HHHHC
Q ss_conf 98514
Q gi|254780281|r 193 LITYG 197 (201)
Q Consensus 193 ll~~~ 197 (201)
+|++.
T Consensus 141 ~l~k~ 145 (154)
T 3kcm_A 141 ELSKA 145 (154)
T ss_dssp C----
T ss_pred HHHHH
T ss_conf 99998
No 28
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.79 E-value=9.4e-19 Score=132.69 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=109.9
Q ss_pred CCEEEEC-CCCCEECHHHHCCCEEEEEEECCCCCCCCHH-HHHHHHHHHHHHCCCCCCEEEEEEEEC---CCCCCHHHHH
Q ss_conf 8707982-9997967788499679999604777654468-888776555430244333058876514---3333305777
Q gi|254780281|r 37 SDVHLVA-QDGTDFSLSSLYIKPSIVFFGFTNCSAVCPT-TLSRLDRLLKQVDPTGTLLNAYFITVD---PKRDTPEVMK 111 (201)
Q Consensus 37 ~~f~L~d-~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~-~l~~l~~~~~~l~~~~~~v~~v~IsvD---P~rDt~e~l~ 111 (201)
.+|.+.| .+|+++++++|+||+++++||+||||. |.. ..+.++.+++...+.+ +.++.+.++ ++.|+++.++
T Consensus 10 ~~~~~~~~ing~~~~l~dlkGK~vvl~F~a~~C~~-C~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 86 (160)
T 3lor_A 10 LELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPG-CVNHGVPQAQKIHRMIDESQ--VQVIGLHSVFEHHDVMTPEALK 86 (160)
T ss_dssp CCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHH-HHHTHHHHHHHHHHHSCTTT--EEEEEEECCCSCGGGSCHHHHH
T ss_pred CCCCCCCCCCCCEECHHHHCCCEEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCHHHHH
T ss_conf 97667556579671699979997999999584776-32442277899999853212--2211345553311358899999
Q ss_pred HHHHHCCCCEECC---CCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 7753136864224---5898898988886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 112 KFVQRFSDRIIGI---SGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 112 ~y~~~~~~~~~~l---tg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
+|.+.++..|..+ .+.......+++.|++. +.+.+||||++|+++..+.+..+.+.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------------------~~P~~~lID~~G~I~~~~~G~~~~~~l~~ 148 (160)
T 3lor_A 87 VFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLE------------------GTPSIILADRKGRIRQVQFGQVDDFVLGL 148 (160)
T ss_dssp HHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCC------------------SSSEEEEECTTSBEEEEEESCCCHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCC------------------CCEEEEEECCCCEEEEEEECCCCHHHHHH
T ss_conf 999841677638983255302343110012224------------------45039998799949999827899999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999985143
Q gi|254780281|r 189 KINRLITYGN 198 (201)
Q Consensus 189 ~i~~ll~~~~ 198 (201)
+|++||++++
T Consensus 149 ~i~~lL~e~~ 158 (160)
T 3lor_A 149 LLGSLLSETD 158 (160)
T ss_dssp HHHHHHTCC-
T ss_pred HHHHHHCCCC
T ss_conf 9999975802
No 29
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis}
Probab=99.79 E-value=8.6e-19 Score=132.92 Aligned_cols=134 Identities=12% Similarity=0.171 Sum_probs=110.3
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
.+...++|.+.+.+|+.+++++ +||+++|+||.|||| .|..+++.|.++++++.++ +++++.|+++...++++.++
T Consensus 11 ~p~~~~~f~~~~~~G~~v~l~~-~gk~vll~F~a~wC~-~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~ 86 (145)
T 3erw_A 11 QPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCP-PCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQNQQVVE 86 (145)
T ss_dssp -CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCH-HHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSSCHHHHH
T ss_pred CCCCCCCCEEECCCCCEEEEHH-CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHCC--CEEEEEEEEEECHHHHHHHH
T ss_conf 8999988375889989987065-698899999879897-0999999999998642116--80599998540356788877
Q ss_pred HHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 7753136864224589889898888609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 112 KFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 112 ~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
.|++.+..+|..+.....+ +++.|++.. .+.+||||++|+++..+.+..+.+++.+-|
T Consensus 87 ~~~~~~~~~~p~~~d~~~~---~~~~~~v~~------------------~P~~~lid~~G~i~~~~~G~~~~e~l~e~~ 144 (145)
T 3erw_A 87 DFIKANKLTFPIVLDSKGE---LMKEYHIIT------------------IPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHTTCCSCEEECSSSH---HHHHTTCCE------------------ESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHCCCCCCEEECCHHH---HHHHHCCCC------------------CCEEEEECCCCEEEEEEECCCCHHHHHHHH
T ss_conf 8998638567411176689---999707577------------------887999979998999997999999999975
No 30
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter pomeroyi DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.78 E-value=9.4e-19 Score=132.71 Aligned_cols=145 Identities=15% Similarity=0.121 Sum_probs=109.4
Q ss_pred CCCCCEEEEC--CCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC---CCCHH
Q ss_conf 6678707982--999796778849967999960477765446888877655543024433305887651433---33305
Q gi|254780281|r 34 RFNSDVHLVA--QDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPK---RDTPE 108 (201)
Q Consensus 34 ~~~~~f~L~d--~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~---rDt~e 108 (201)
.-+|+|++.+ ..|++++++||+||++||+||+||||..|+.+++.++..++.+.+. .+.++.++.|++ .++++
T Consensus 4 ~kAP~f~~~~~~n~~~~i~L~d~kGK~vll~F~~~~C~~c~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~ 81 (158)
T 3eyt_A 4 MKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPI 81 (158)
T ss_dssp EECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHH
T ss_pred CCCCCCCCCCCCCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCCCCCCHH
T ss_conf 4389842554457996871999699989999968789995400316777556514652--27998405652000125799
Q ss_pred HHHHHHHHCCCCEECCCCCHHH--HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHH
Q ss_conf 7777753136864224589889--89888860908862256556777752587420699985898299985789888999
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPID--VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSA 186 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~--i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i 186 (201)
...++.+.++-++..+...... ....+..++ +.+.+.+||||++|+++..+.+..+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~------------------~~~~P~~~lID~~G~i~~~~~g~~~~~~l 143 (158)
T 3eyt_A 82 SLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQ------------------MRGTPSLLLIDKAGDLRAHHFGDVSELLL 143 (158)
T ss_dssp HHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTT------------------CCSSSEEEEECTTSEEEEEEESCCCHHHH
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC------------------CCCCCEEEEECCCCEEEEEEECCCCHHHH
T ss_conf 999988741535407871765036789998713------------------36786489998999999999389999999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999985143
Q gi|254780281|r 187 IEKINRLITYGN 198 (201)
Q Consensus 187 ~~~i~~ll~~~~ 198 (201)
.+.|+.||++..
T Consensus 144 ~~~i~~Ll~e~~ 155 (158)
T 3eyt_A 144 GAEIATLLGEAA 155 (158)
T ss_dssp HHHHHHHHTSCC
T ss_pred HHHHHHHHCCCC
T ss_conf 999999974226
No 31
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.78 E-value=1.2e-18 Score=132.06 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=103.7
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666678707982999796778849967999960477765446888877655543024-4333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDP-TGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~-~~~~v~~v~IsvDP~rDt~e~l 110 (201)
.+..+|+|+++|.+|+++++++++||+++++||++|||. |+.+++.+.++.+.+.+ .+..+++++|+.| ++++..
T Consensus 3 ~G~~apdf~~~~~~G~~~sl~~~~Gk~~ll~f~~~~C~~-C~~~~~~~~~~~~~~~~~~~~~v~~~~i~~d---~~~~~~ 78 (142)
T 3ewl_A 3 AGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSN-CRKFEKLFAEIPAFVEMVENGTLRVLAIYPD---ENREEW 78 (142)
T ss_dssp TTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHH-HHHHHHHHHTCHHHHHHHHHTSEEEEEEECS---SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHHCCCCCEEEEEECC---CCHHHH
T ss_conf 998688848588995998799909986999854787986-3789876532445544430343304899668---999999
Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 77753136864224589889898888609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 111 KKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 111 ~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
++|.+.+...|........+. .+.+. |.+.+.+.+||||++|+++.. ..+.+++.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------y~v~~~P~~~liD~~G~Ii~~---~~~~~~le~~L 136 (142)
T 3ewl_A 79 ATKAVYMPQGWIVGWNKAGDI-RTRQL------------------YDIRATPTIYLLDGRKRVILK---DTSMEQLIDYL 136 (142)
T ss_dssp HHHHTTSCTTCEEEECTTCHH-HHTTC------------------SCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHH-HHHHH------------------EEECCCCEEEEECCCCEEEEE---CCCHHHHHHHH
T ss_conf 999998599874112342145-55554------------------053244149999799989984---09989999999
Q ss_pred HHHHHH
Q ss_conf 999851
Q gi|254780281|r 191 NRLITY 196 (201)
Q Consensus 191 ~~ll~~ 196 (201)
.+++.+
T Consensus 137 ~~~~~k 142 (142)
T 3ewl_A 137 ATQAGK 142 (142)
T ss_dssp HC----
T ss_pred HHHHCC
T ss_conf 998586
No 32
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.78 E-value=1.7e-18 Score=131.19 Aligned_cols=131 Identities=15% Similarity=0.227 Sum_probs=108.0
Q ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 78707982999796778849967999960477765446888877655543024433305887651433333057777753
Q gi|254780281|r 36 NSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQ 115 (201)
Q Consensus 36 ~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~ 115 (201)
.++|+|+|.+|+++++++++||++||+||+|||| .|..+++.+.+++++. .++++++|+.| |+++.+++|++
T Consensus 4 ~~dFsl~~~~G~~~~l~~~~gk~vvl~F~a~wC~-~C~~~~~~l~~l~~~~----~~~~~v~v~~~---~~~~~~~~~~~ 75 (136)
T 1lu4_A 4 RLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCP-FCNAEAPSLSQVAAAN----PAVTFVGIATR---ADVGAMQSFVS 75 (136)
T ss_dssp GGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHC----TTSEEEEEECS---SCHHHHHHHHH
T ss_pred CCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHC----CCCCCCCCCCC---HHHHHHHHHHH
T ss_conf 7731688799899708996999799999878884-5487725399984311----33210134320---23467998888
Q ss_pred HCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--CCCCCHHHHHHHHHHH
Q ss_conf 13686422458988989888860908862256556777752587420699985898299985--7898889999999999
Q gi|254780281|r 116 RFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--PYKDDSDSAIEKINRL 193 (201)
Q Consensus 116 ~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~~~~~~~~i~~~i~~l 193 (201)
.++.+|+.+...... +++.|++. +.+.+|++|++|+++... .+..+.+++.+.|++|
T Consensus 76 ~~~~~~p~~~D~~~~---~~~~~~v~------------------~~P~~~~id~~G~i~~v~~~~g~~~~~~l~~~l~~L 134 (136)
T 1lu4_A 76 KYNLNFTNLNDADGV---IWARYNVP------------------WQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HHTCCSEEEECTTSH---HHHHTTCC------------------SSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred HHCCCCCEEECCHHH---HHHHCCCC------------------CCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 742245268867489---99983998------------------445799996997199984247889999999999985
Q ss_pred HH
Q ss_conf 85
Q gi|254780281|r 194 IT 195 (201)
Q Consensus 194 l~ 195 (201)
.+
T Consensus 135 ~a 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred HC
T ss_conf 29
No 33
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78 E-value=3.5e-18 Score=129.27 Aligned_cols=142 Identities=20% Similarity=0.184 Sum_probs=110.4
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CC---CCCCHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651-43---333305
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV-DP---KRDTPE 108 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv-DP---~rDt~e 108 (201)
....|+|+|.|.+|+.+++++|+||++||+||.|||| .|-..++.|.++++++.+ ++++++|.. |+ ..|+++
T Consensus 10 G~~aPdF~L~d~~G~~~~Lsd~~gk~vvl~FwatwCp-~c~~~~p~l~~l~~~y~~---~v~~v~v~s~d~~~~~~~~~e 85 (188)
T 2cvb_A 10 ESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCP-YVKGSIGELVALAERYRG---KVAFVGINANDYEKYPEDAPE 85 (188)
T ss_dssp TCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCH-HHHTTHHHHHHHHHHTTT---TEEEEEEECCCTTTCGGGSHH
T ss_pred CCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHHHHCCCHHHHCCC---EEEEEEECCCCCCCCCCCCHH
T ss_conf 9937760856699999878996999599999898997-427876412200111043---047765303552222211488
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--------C
Q ss_conf 77777531368642245898898988886090886225655677775258742069998589829998578--------9
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--------K 180 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--------~ 180 (201)
.+++|.+.+.-+|..+.....+ +++.|++. +++.+||||++|+++-.-.- .
T Consensus 86 ~~~~~~~~~~~~~p~l~D~~~~---~~~~~~v~------------------~~P~~~liD~~G~I~y~G~idd~~~~~~~ 144 (188)
T 2cvb_A 86 KMAAFAEEHGIFFPYLLDETQE---VAKAYRAL------------------RTPEVFLFDERRLLRYHGRVNDNPKDPSK 144 (188)
T ss_dssp HHHHHHHHHTCCSCEEECSSSH---HHHHTTCC------------------EESEEEEECTTCBEEEEECSSSCTTCGGG
T ss_pred HHHHHHHHHCCCCEEEECCCCC---HHHHCCCC------------------EEEEEEEECCCCEEEEEEEECCCCCCCCC
T ss_conf 8999999829874047737765---11103654------------------47789998899869996364378878887
Q ss_pred CCHHHHHHHHHHHHHHCCC
Q ss_conf 8889999999999851433
Q gi|254780281|r 181 DDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 181 ~~~~~i~~~i~~ll~~~~~ 199 (201)
.+...+.+.|+.|++.+.+
T Consensus 145 ~~~~~L~~Ai~~ll~g~~~ 163 (188)
T 2cvb_A 145 VQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp CCCCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHCCCCC
T ss_conf 8889999999999838998
No 34
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA; 1.60A {Geobacillus kaustophilus HTA426}
Probab=99.77 E-value=7.8e-18 Score=127.15 Aligned_cols=144 Identities=20% Similarity=0.266 Sum_probs=110.7
Q ss_pred CCCCCCCEEEECC-CCCEECHHHHCC-CEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC----CCC
Q ss_conf 6666787079829-997967788499-6799996047776544688887765554302443330588765143----333
Q gi|254780281|r 32 NRRFNSDVHLVAQ-DGTDFSLSSLYI-KPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP----KRD 105 (201)
Q Consensus 32 ~~~~~~~f~L~d~-~G~~~~~~~~~G-k~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP----~rD 105 (201)
....+|+|+|.|. +|+.+++++|+| |++|++||.|||| .|..+++.|.++++++.+++ ++++.|+.+. ..|
T Consensus 20 vG~~APdF~L~d~~dG~~vsLsd~~Gkk~vvl~FwatwCp-~C~~e~p~l~~l~~~~~~~~--~~~v~i~~~~~~~~~~~ 96 (196)
T 2ywi_A 20 LGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCP-FVKHVQHELVRLANDYMPKG--VSFVAINSNDAEQYPED 96 (196)
T ss_dssp TTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCH-HHHHHHHHHHHHHHHHGGGT--CEEEEEECSCTTTCGGG
T ss_pred CCCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCCCCCCC
T ss_conf 9799967688767789897599967888799999389882-48999999999999975079--45998722555422344
Q ss_pred CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE--E----CC
Q ss_conf 30577777531368642245898898988886090886225655677775258742069998589829998--5----78
Q gi|254780281|r 106 TPEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV--I----PY 179 (201)
Q Consensus 106 t~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~--~----~~ 179 (201)
+++.++.|++.++.+|..+...... +++.|++. .++.+||||++|+++-. + +.
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~D~~~~---~~~~~~v~------------------~~P~~~lID~~G~I~~rG~id~~~~~ 155 (196)
T 2ywi_A 97 SPENMKKVAEELGYPFPYLYDETQE---VAKAYDAA------------------CTPDFYIFDRDLKCVYRGQLDDSRPN 155 (196)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSCH---HHHHHTCC------------------EESEEEEEETTCBEEEEECSSSCCTT
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCHH---HHHHHCCC------------------EEEEEEEECCCCEEEEEEEECCCCCC
T ss_conf 5899999999819976530387107---88873452------------------36778998789749984154366767
Q ss_pred ---CCCHHHHHHHHHHHHHHCCC
Q ss_conf ---98889999999999851433
Q gi|254780281|r 180 ---KDDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 180 ---~~~~~~i~~~i~~ll~~~~~ 199 (201)
....+.+.+.|+.+++.+.+
T Consensus 156 ~~~~~~~~~L~~ai~~ll~g~~~ 178 (196)
T 2ywi_A 156 NGIPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp TCCCCCCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 78877889999999999838998
No 35
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.77 E-value=8.8e-18 Score=126.84 Aligned_cols=139 Identities=16% Similarity=0.138 Sum_probs=108.5
Q ss_pred CCCCCCCEEEECCCCCEECHH--HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 666678707982999796778--849967999960477765446888877655543024433305887651433333057
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLS--SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~--~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
.+..+|+|+|.|.+|+.++++ +++||+++++||.+||| .|..+++.+.++++++..+ .++.++.++.|+ +.+.
T Consensus 7 iG~~aPdf~l~~~~G~~~~ls~~~~~gk~vvl~f~a~wC~-~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~---~~~~ 81 (148)
T 3fkf_A 7 VGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCD-PQPEANAELKRLNKEYKKN-KNFAMLGISLDI---DREA 81 (148)
T ss_dssp TTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGC-CCHHHHHHHHHHHHHTTTC-TTEEEEEEECCS---CHHH
T ss_pred CCCCCCCEEEECCCCCEEECCHHHHCCCEEEEEEECCCCC-CCCCCCHHHHHHHHHHHHC-CEEEEEEEECCC---CHHH
T ss_conf 9799988488889989885467991999899999999999-8422255489999986116-516899852588---9899
Q ss_pred HHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 77775313686422458988989888860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 110 MKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 110 l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
.+.+.+....+|.-+.........+++.||+. ..+.+||||++|+++... ...+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~------------------~~P~~~liDk~G~Iv~~~---~~g~~~~~~ 140 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAIL------------------TLPTNILLSPTGKILARD---IQGEALTGK 140 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC------------------SSSEEEEECTTSBEEEES---CCHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEECCCHHHHHHHHCCCC------------------CCCEEEEECCCCEEEEEE---CCHHHHHHH
T ss_conf 99999980999868874576167899986988------------------046899998999899997---881785999
Q ss_pred HHHHHHH
Q ss_conf 9999851
Q gi|254780281|r 190 INRLITY 196 (201)
Q Consensus 190 i~~ll~~ 196 (201)
|++||..
T Consensus 141 l~~ll~~ 147 (148)
T 3fkf_A 141 LKELLKT 147 (148)
T ss_dssp HHHHC--
T ss_pred HHHHHCC
T ss_conf 9999746
No 36
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.76 E-value=1.3e-17 Score=125.72 Aligned_cols=136 Identities=12% Similarity=0.119 Sum_probs=109.3
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+...|+|+|.+++|+ +++++++||+++|+||.+||| .|..+++.|+++++++.++ .+.++.|++| ++.+....
T Consensus 6 G~~aPdf~l~~~~g~-~~l~d~~gk~~ll~F~~~~C~-~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d---~~~~~~~~ 78 (152)
T 3gl3_A 6 GDKAPDFALPGKTGV-VKLSDKTGSVVYLDFWASWCG-PCRQSFPWMNQMQAKYKAK--GFQVVAVNLD---AKTGDAMK 78 (152)
T ss_dssp TSBCCCCEEEBSSSE-EEGGGGTTSEEEEEEECTTCT-HHHHHHHHHHHHHHHHGGG--TEEEEEEECC---SSHHHHHH
T ss_pred CCCCCCEEEECCCCC-EEHHHHCCCEEEEEEECCCCC-CHHHHCHHHHHHHHHCCCC--CEEEEECCCC---CCHHHHHH
T ss_conf 588888698789998-978995899899998289899-7122220355555421343--0368641566---44056677
Q ss_pred HHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--CCCHHHHHHHH
Q ss_conf 7531368642245898898988886090886225655677775258742069998589829998578--98889999999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--KDDSDSAIEKI 190 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--~~~~~~i~~~i 190 (201)
|.+.+...|..+..... .+++.||+.. .+.+++||++|+++..+.+ +.+.+.+.+.|
T Consensus 79 ~~~~~~~~~~~~~d~~~---~~~~~~gi~~------------------~P~~~iiD~~G~vv~~~~G~~~~~~~~l~~~i 137 (152)
T 3gl3_A 79 FLAQVPAEFTVAFDPKG---QTPRLYGVKG------------------MPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHSCCCSEEEECTTC---HHHHHTTCCS------------------SSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHCCCCCEEEECCCH---HHHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCCCHHHHHHHH
T ss_conf 89873997417887737---9999839983------------------58799997999999999798989999999999
Q ss_pred HHHHHH
Q ss_conf 999851
Q gi|254780281|r 191 NRLITY 196 (201)
Q Consensus 191 ~~ll~~ 196 (201)
+++|+-
T Consensus 138 ~~~l~g 143 (152)
T 3gl3_A 138 LAALGG 143 (152)
T ss_dssp HHHTC-
T ss_pred HHHHCC
T ss_conf 997674
No 37
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii atcc 33406}
Probab=99.76 E-value=1.9e-18 Score=130.81 Aligned_cols=141 Identities=14% Similarity=0.176 Sum_probs=105.0
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
.+...|+|.|.|.+|+.+++++++||+++|+||.|||+ .|...++.|.++++++... .+.+++|++|. +.+.++
T Consensus 7 vG~~~P~f~l~~~~g~~~~l~~~~gk~~vv~f~a~~C~-~C~~~~~~l~~~~~~~~~~--~~~~i~is~d~---~~~~~~ 80 (148)
T 3hcz_A 7 LGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCG-HCQQETPKLYDWWLKNRAK--GIQVYAANIER---KDEEWL 80 (148)
T ss_dssp TTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGC-TTCSHHHHHHHHHHHHGGG--TEEEEEEECCS---SSHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHHCC--CCEEEEEECCC---CHHHHH
T ss_conf 79999882899999699869993999899999898372-7799989999999985105--75179987899---999999
Q ss_pred HHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 77531368-64224589889898888609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 112 KFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 112 ~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
+|++.... .|..+... +....+.+.|++ .+.+.+|+||++|+++....+..+.++..+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v------------------~~~P~~~iid~~G~I~~~~~g~~~~~~~l~~~ 141 (148)
T 3hcz_A 81 KFIRSKKIGGWLNVRDS-KNHTDFKITYDI------------------YATPVLYVLDKNKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp HHHHHHTCTTSEEEECT-TCCCCHHHHHCC------------------CSSCEEEEECTTCBEEEESCCGGGHHHHHHHH
T ss_pred HHHHHHCCCCCEEEECC-CCHHHHHHHCCC------------------CCCCEEEEECCCCEEEEEECCCCCHHHHHHHH
T ss_conf 99998289987388875-235899998499------------------83478999989998999988812899999999
Q ss_pred HHHHHHC
Q ss_conf 9998514
Q gi|254780281|r 191 NRLITYG 197 (201)
Q Consensus 191 ~~ll~~~ 197 (201)
.+.|+.+
T Consensus 142 ~k~l~~~ 148 (148)
T 3hcz_A 142 EKSLKTK 148 (148)
T ss_dssp HHHHHHC
T ss_pred HHHHCCC
T ss_conf 9974479
No 38
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein structure initiative; HET: MSE; 1.30A {Bacteroides fragilis nctc 9343}
Probab=99.76 E-value=4e-18 Score=128.88 Aligned_cols=134 Identities=11% Similarity=0.119 Sum_probs=101.5
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666678707982999796778849967999960477765446888877655543024-4333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDP-TGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~-~~~~v~~v~IsvDP~rDt~e~l 110 (201)
.+...|+|+|++++|+++++++++||+++|+||.+||| .|...++.+.+.++.... ....+++++||.| ++.+..
T Consensus 7 iG~~apdf~l~~~~G~~~~l~~~~gk~vvl~f~~~~C~-~C~~~~~~l~~~~~~~~~~~~~~v~vi~is~d---~~~~~~ 82 (142)
T 3eur_A 7 LGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCH-ACAEMIEGLKASPVINGFTAAKKLKVLSIYPD---EELDEW 82 (142)
T ss_dssp TTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSH-HHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS---SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CCCEEEHHHHHHHHHHHHHHCCCEEEEEECCC---CCHHHH
T ss_conf 98999794869899799878993998299998267899-76323021687776555541488489876489---999999
Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 77753136864224589889898888609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 111 KKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 111 ~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
++|++.++.+|..+..+...+. +.+.|+ +.+.+.+||||++|+++.. ..+++++.+.|
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~-~~~~~~------------------i~~~P~~~liD~~G~Iv~~---~~~~~~i~~~L 140 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIK-NKNLYD------------------LRAIPTLYLLDKNKTVLLK---DATLQKVEQYL 140 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHH-HTTCSC------------------CTTCSEEEEECTTCBEEEE---EECHHHHHHHH
T ss_pred HHHHHHCCCCCCEECCCCCCHH-HHHHCC------------------CCCCCEEEEECCCCEEEEE---ECCHHHHHHHH
T ss_conf 9999984998631327431134-555401------------------3677789999899889996---39999999986
Q ss_pred H
Q ss_conf 9
Q gi|254780281|r 191 N 191 (201)
Q Consensus 191 ~ 191 (201)
+
T Consensus 141 ~ 141 (142)
T 3eur_A 141 A 141 (142)
T ss_dssp H
T ss_pred C
T ss_conf 3
No 39
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.75 E-value=7.9e-18 Score=127.12 Aligned_cols=139 Identities=12% Similarity=0.165 Sum_probs=112.0
Q ss_pred CCCCCEEEECC--CCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC--CCCCCHHH
Q ss_conf 66787079829--997967788499679999604777654468888776555430244333058876514--33333057
Q gi|254780281|r 34 RFNSDVHLVAQ--DGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD--PKRDTPEV 109 (201)
Q Consensus 34 ~~~~~f~L~d~--~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD--P~rDt~e~ 109 (201)
...|+|+..+. +|+.+++++++||+++|+||.+||| .|...++.+.++++.+++ ++.+++|+++ ++..+++.
T Consensus 5 ~p~P~~~~~~~~lng~~~~~~~~~gk~vll~f~a~wC~-~C~~~~~~l~~l~~~~~d---~~~vi~i~~~~~~~~~~~~~ 80 (148)
T 2b5x_A 5 QPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCH-LCKEAMPQVNEFRDKYQD---QLNVVAVHMPRSEDDLDPGK 80 (148)
T ss_dssp CBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHHTT---TSEEEEEECCCSTTTSSHHH
T ss_pred CCCCCCCCCCCCCCCEEECHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCCCCCCHHH
T ss_conf 90899867765758948268995969899999899898-899999886401222300---01001223466432210688
Q ss_pred HHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 77775313686422458988989888860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 110 MKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 110 l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
+++|++.++..|..+..... .+++.|++. +.+.+|+||++|+++..+.+..+.+++.+.
T Consensus 81 ~~~~~~~~~~~~p~~~D~~~---~~~~~~~v~------------------~~P~~~iid~~G~i~~~~~G~~~~~~l~~~ 139 (148)
T 2b5x_A 81 IKETAAEHDITQPIFVDSDH---ALTDAFENE------------------YVPAYYVFDKTGQLRHFQAGGSGMKMLEKR 139 (148)
T ss_dssp HHHHHHHTTCCSCEEECSSC---HHHHHTCCC------------------CSSEEEEECTTCBEEEEEESCSTTHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCH---HHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHH
T ss_conf 88899972998786438608---999983999------------------048799997999899999589999999999
Q ss_pred HHHHHHHC
Q ss_conf 99998514
Q gi|254780281|r 190 INRLITYG 197 (201)
Q Consensus 190 i~~ll~~~ 197 (201)
|++||+++
T Consensus 140 i~~ll~e~ 147 (148)
T 2b5x_A 140 VNRVLAET 147 (148)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHCC
T ss_conf 99998266
No 40
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.74 E-value=3.4e-17 Score=123.31 Aligned_cols=143 Identities=16% Similarity=0.159 Sum_probs=104.3
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCC-EE-EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 66667870798299979677884996-79-99960477765446888877655543024433305887651433333057
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIK-PS-IVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk-~~-li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
.....|+|+|.|++|+.+++++++|| ++ +++|+.+||| .|..+++.+++.++.+.+.+ ++++.||. |+++.
T Consensus 11 iG~~aP~F~l~d~~G~~v~Lsd~~g~~~vvl~~~~~~~cp-~C~~~~~~l~~~~~~~~~~~--~~vv~vs~----d~~~~ 83 (160)
T 1xvw_A 11 VGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTG-ICQGELDQLRDHLPEFENDD--SAALAISV----GPPPT 83 (160)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSS-HHHHHHHHHHHTGGGTSSSS--EEEEEEES----CCHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCCEEEEEECCCCCCC-HHHHHHHHHHHHHHHHCCCC--CEEEEECC----CCHHH
T ss_conf 9899978088879999987899769972999878323684-06777678887654422468--57876157----62999
Q ss_pred HHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC----CCCCHHH
Q ss_conf 777753136864224589889898888609088622565567777525874206999858982999857----8988899
Q gi|254780281|r 110 MKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP----YKDDSDS 185 (201)
Q Consensus 110 l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~----~~~~~~~ 185 (201)
+++|.+..+.++..+.. .+.-..++++||++.... . + ....+||||++|+++-... ...+...
T Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~va~~ygv~~~~~---------~--~-~~r~tfvID~~G~I~~~~v~~~~~~~~~~~ 150 (160)
T 1xvw_A 84 HKIWATQSGFTFPLLSD-FWPHGAVSQAYGVFNEQA---------G--I-ANRGTFVVDRSGIIRFAEMKQPGEVRDQRL 150 (160)
T ss_dssp HHHHHHHHTCCSCEEEC-TTTTTHHHHHTTCEETTT---------T--E-ECSEEEEECTTSBEEEEEECCTTCCCCHHH
T ss_pred HHHHHHHHCCCCEEEEE-CCCCCHHHHHCCCEECCC---------C--C-CCCEEEEECCCCEEEEEEEECCCCCCCHHH
T ss_conf 99999986999509985-798865899809844258---------9--7-437899998999899999828995579899
Q ss_pred HHHHHHHHH
Q ss_conf 999999998
Q gi|254780281|r 186 AIEKINRLI 194 (201)
Q Consensus 186 i~~~i~~ll 194 (201)
+.+.|+.|.
T Consensus 151 i~~aL~aL~ 159 (160)
T 1xvw_A 151 WTDALAALT 159 (160)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHC
T ss_conf 999998525
No 41
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.74 E-value=7.9e-18 Score=127.13 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=102.9
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
.....|+|+|+|.+|+.+++++++||+++|+||++||| .|..+++.+.++++++.+. ++.++.|+.|.+ .+
T Consensus 17 vG~~aPdf~l~~~~G~~~~l~~~~gk~~vl~f~~~~C~-~C~~~~~~l~~~~~~~~~~--~~~vv~v~~d~~------~~ 87 (158)
T 3hdc_A 17 TGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCP-YCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKR------FP 87 (158)
T ss_dssp TTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHSSTT--SEEEEEEECSSS------CC
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHCCCCCCCCCCCCCC--CCEEEEEECHHH------HH
T ss_conf 99999883878999699809996999799999898897-4044262110111001124--331478754087------89
Q ss_pred HHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC--CCHHHHHHH
Q ss_conf 775313686422458988989888860908862256556777752587420699985898299985789--888999999
Q gi|254780281|r 112 KFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK--DDSDSAIEK 189 (201)
Q Consensus 112 ~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~--~~~~~i~~~ 189 (201)
++.+....+|..+...... +++.|++.. .+.+||||++|+++..+.+. .+.+++.+.
T Consensus 88 ~~~~~~~~~~p~~~D~~~~---~~~~~~v~~------------------~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~ 146 (158)
T 3hdc_A 88 EKYRRAPVSFNFLSDATGQ---VQQRYGANR------------------LPDTFIVDRKGIIRQRVTGGIEWDAPKVVSY 146 (158)
T ss_dssp GGGGGCCCSCEEEECTTSH---HHHHTTCCS------------------SSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred HHHHHCCCCCEEEECCCCH---HHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCCCHHHHHHH
T ss_conf 9998738850020077527---999859983------------------6879999799999999969999899999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780281|r 190 INRL 193 (201)
Q Consensus 190 i~~l 193 (201)
|+.|
T Consensus 147 l~~L 150 (158)
T 3hdc_A 147 LKSL 150 (158)
T ss_dssp HHTT
T ss_pred HHHC
T ss_conf 9977
No 42
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.74 E-value=3.7e-18 Score=129.12 Aligned_cols=148 Identities=15% Similarity=0.143 Sum_probs=98.9
Q ss_pred CCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHH
Q ss_conf 67870798299979677884996799996047776544688887765554302443330588765143333305777775
Q gi|254780281|r 35 FNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFV 114 (201)
Q Consensus 35 ~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~ 114 (201)
..++|+|+|++|+++++++|+||+++++||+|||| .|..+++.|++++++++ ++.++.|++|.+.+ .....
T Consensus 16 ~~p~F~l~~~dG~~~~l~d~~Gk~vvl~f~~~~C~-~C~~~~~~l~~l~~~~~----~~~vv~v~~~~~~~----~~~~~ 86 (165)
T 3ha9_A 16 REASFSLTTIDGEVISLNNVGGDVVILWFMAAWCP-SCVYMADLLDRLTEKYR----EISVIAIDFWTAEA----LKALG 86 (165)
T ss_dssp HHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCT-THHHHHHHHHHHHHHCT----TEEEEEEECCSHHH----HHHHT
T ss_pred CCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CCCCCCHHHHHHHHHHC----CCCEEEEEECCHHH----HHHHH
T ss_conf 68890878899799809996999799999899998-85463132688998614----78689999455155----55543
Q ss_pred HHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 31368642245898898988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 115 QRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 115 ~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
. ................+.+.+++.+.....+.......|.+.+.+.+||||++|+++.... ..+.+++.+.|+.|.
T Consensus 87 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~liD~~G~I~~~~~-~~~~~~l~~~i~~l~ 163 (165)
T 3ha9_A 87 L--NKPGYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLYAGT-TPSLGELESVIKSVQ 163 (165)
T ss_dssp C--CSTTSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEEEEE-SCCHHHHHHHHHHC-
T ss_pred H--CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEC-CCCHHHHHHHHHHHH
T ss_conf 1--0123321123024667787619752101353013677619873657999989995999977-999899999999983
No 43
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.72 E-value=8.9e-17 Score=120.78 Aligned_cols=131 Identities=18% Similarity=0.243 Sum_probs=102.9
Q ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 78707982999796778849967999960477765446888877655543024433305887651433333057777753
Q gi|254780281|r 36 NSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQ 115 (201)
Q Consensus 36 ~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~ 115 (201)
..+|+++|.+|+.+++++++||+++|+||.+||| .|..+++.+.+++++++ ++.+++|+.+ |+++..++|++
T Consensus 5 ~~~F~~~~~~G~~~~~~~~~Gk~~ll~F~a~wC~-~C~~e~~~l~~~~~~~~----~~~~v~i~~~---~~~~~~~~~~~ 76 (136)
T 1zzo_A 5 QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCP-TCQGEAPVVGQVAASHP----EVTFVGVAGL---DQVPAMQEFVN 76 (136)
T ss_dssp GGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEECS---SCHHHHHHHHH
T ss_pred CCCEEEECCCCCEECHHHHCCCEEEEEEECCCCC-CCCCCCCCHHHHHHHHC----CEEECCCCCC---CCHHHHHHHHH
T ss_conf 7043888799899718997999799999899785-72335632899975412----0000110123---20167789999
Q ss_pred HCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 1368-642245898898988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 116 RFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 116 ~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
.+.. .+..+..... .+++.|++.. .+.++|+|++|+++... +..+.+++.+.|+.|+
T Consensus 77 ~~~~~~~~~~~D~~~---~~~~~~~v~~------------------~P~~~lid~~G~i~~~~-G~~~~~~l~~~l~~L~ 134 (136)
T 1zzo_A 77 KYPVKTFTQLADTDG---SVWANFGVTQ------------------QPAYAFVDPHGNVDVVR-GRMSQDELTRRVTALT 134 (136)
T ss_dssp HTTCTTSEEEECTTC---HHHHHTTCCS------------------SSEEEEECTTCCEEEEE-SCCCHHHHHHHHHHHC
T ss_pred HHCCCCCEEEECCCH---HHHHHCCCCC------------------CCEEEEECCCCEEEEEE-CCCCHHHHHHHHHHHH
T ss_conf 819986407776747---9999849993------------------47799995998499998-9999999999999986
Q ss_pred HH
Q ss_conf 51
Q gi|254780281|r 195 TY 196 (201)
Q Consensus 195 ~~ 196 (201)
++
T Consensus 135 ~~ 136 (136)
T 1zzo_A 135 SR 136 (136)
T ss_dssp --
T ss_pred CC
T ss_conf 86
No 44
>3drn_A Peroxiredoxin, bacterioferritin comigratory protein homolog; oxidoreductase; HET: CIT; 2.15A {Sulfolobus solfataricus}
Probab=99.71 E-value=1.1e-16 Score=120.17 Aligned_cols=141 Identities=12% Similarity=0.111 Sum_probs=106.1
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCC-EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 6667870798299979677884996-799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIK-PSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk-~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
+..+|+|+|.|++|+++++++|+|| +++++|+.+||...|+.+++.+++.++++.+.+ +.++.++. |+++.++
T Consensus 5 G~~aPdF~l~~~~G~~vsLsd~~gk~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vi~i~~----~~~~~~~ 78 (161)
T 3drn_A 5 GDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSS----DDINSHK 78 (161)
T ss_dssp TSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEES----CCHHHHH
T ss_pred CCCCCCCEEECCCCCEEEHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCC--EEEEECCC----CCHHHHH
T ss_conf 49998728687997998689987996799996167789970042354423466524431--47762147----7899999
Q ss_pred HHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCC----HHHHH
Q ss_conf 77531368642245898898988886090886225655677775258742069998589829998578988----89999
Q gi|254780281|r 112 KFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDD----SDSAI 187 (201)
Q Consensus 112 ~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~----~~~i~ 187 (201)
+|.+...-+|+.+.....+ +++.|++..... ....+||||++|+|+..+.+..+ .+++.
T Consensus 79 ~~~~~~~~~f~~l~D~~~~---v~~~~~~~~~~~--------------~~r~tflID~~G~I~~~~~~~~~~~~~~~eil 141 (161)
T 3drn_A 79 RFKEKYKLPFILVSDPDKK---IRELYGAKGFIL--------------PARITFVIDKKGIIRHIYNSQMNPANHVNEAL 141 (161)
T ss_dssp HHHHHTTCCSEEEECTTSH---HHHHTTCCCSSS--------------CCCEEEEECTTSBEEEEEECSSCTTHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHH---HHHHHCCCCCCC--------------CCCEEEEECCCCEEEEEEECCCCCCCCHHHHH
T ss_conf 8875046786522377329---999828887776--------------65359998789989999977889886899999
Q ss_pred HHHHHHHHH
Q ss_conf 999999851
Q gi|254780281|r 188 EKINRLITY 196 (201)
Q Consensus 188 ~~i~~ll~~ 196 (201)
+.|++|-++
T Consensus 142 ~~lk~L~~~ 150 (161)
T 3drn_A 142 KALKQIKEE 150 (161)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999997265
No 45
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.71 E-value=2.4e-16 Score=118.17 Aligned_cols=141 Identities=16% Similarity=0.251 Sum_probs=105.6
Q ss_pred CCCCCCCEEEECCCC----CEECHHHHCC-CEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
Q ss_conf 666678707982999----7967788499-67999960-47776544688887765554302443330588765143333
Q gi|254780281|r 32 NRRFNSDVHLVAQDG----TDFSLSSLYI-KPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD 105 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G----~~~~~~~~~G-k~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD 105 (201)
....+|||+|.+.+| +.++|+||+| ||+|++|+ ..||| +|+.++..+++.++++.+. .++++.||+ |
T Consensus 27 VG~~APdF~l~~~~~n~~~~~V~Lsd~~Gkk~vVL~FyP~~~tp-~Ct~El~~f~~~~~~f~~~--g~~VigIS~----D 99 (221)
T 2c0d_A 27 VTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTF-VCPTEIIEFNKHIKDFENK--NVELLGISV----D 99 (221)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTT-CCHHHHHHHHHTHHHHHHT--TEEEEEEES----S
T ss_pred CCCCCCCCEEEEECCCCCEEEEEHHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHC--CCEEEEECC----C
T ss_conf 48989897825143899787887999779984999998787797-2799999999999999755--945720138----8
Q ss_pred CHHHHHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE-
Q ss_conf 305777775313-------686422458988989888860908862256556777752587420699985898299985-
Q gi|254780281|r 106 TPEVMKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI- 177 (201)
Q Consensus 106 t~e~l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~- 177 (201)
+++..++|++.. .-++..|.... ..+++.||+.... .. ....+|||||+|+|+..+
T Consensus 100 s~~sh~~f~~~~~~~~~~~~l~fplLsD~~---~~vak~YGV~~~~----------~~---~~RatFIID~dG~Ir~~~~ 163 (221)
T 2c0d_A 100 SVYSHLAWKNMPIEKGGIGNVEFTLVSDIN---KDISKNYNVLYDN----------SF---ALRGLFIIDKNGCVRHQTV 163 (221)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCSSEEEECTT---SHHHHHTTCEETT----------TE---ECEEEEEECTTSBEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---CHHHHHCCCCCCC----------CC---CCCEEEEECCCCEEEEEEE
T ss_conf 889999996536651775676566014874---5999984997668----------70---3406999899997999998
Q ss_pred ---CCCCCHHHHHHHHHHHHH
Q ss_conf ---789888999999999985
Q gi|254780281|r 178 ---PYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 178 ---~~~~~~~~i~~~i~~ll~ 195 (201)
+.+.+.+++++.|+.|-.
T Consensus 164 ~~~~~~r~~~EiL~~lkaLQ~ 184 (221)
T 2c0d_A 164 NDLPIGRNVQEVLRTIDSIIH 184 (221)
T ss_dssp ECTTCCCCHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHCC
T ss_conf 066768899999999998342
No 46
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.3e-16 Score=118.32 Aligned_cols=145 Identities=14% Similarity=0.198 Sum_probs=109.2
Q ss_pred CCCCCCCCCCCEE---EECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
Q ss_conf 6676666678707---982999796778849967999960-477765446888877655543024433305887651433
Q gi|254780281|r 28 FVDGNRRFNSDVH---LVAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPK 103 (201)
Q Consensus 28 ~~~~~~~~~~~f~---L~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~ 103 (201)
...-+...+|+|+ +.|.+|++++++||+|||+|++|+ ..+|| +|+.++..++..++++.+.+ ++++.||+
T Consensus 17 ~~~~~~~PAPdF~~~a~~d~~~~~vsLsd~kGK~vVL~FyP~~fTp-vCt~E~~~f~~~~~ef~~~g--~~VigIS~--- 90 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTF-VCPTEIIAFGDRLEEFRSIN--TEVVACSV--- 90 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSS-HHHHHHHHHHHTHHHHHTTT--EEEEEEES---
T ss_pred CCCCCCCCCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHCCC--CEEEEECC---
T ss_conf 7666789899985200488998688679968993999997666598-58799999987699860489--66760025---
Q ss_pred CCCHHHHHHHHHHCC-------CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE
Q ss_conf 333057777753136-------8642245898898988886090886225655677775258742069998589829998
Q gi|254780281|r 104 RDTPEVMKKFVQRFS-------DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV 176 (201)
Q Consensus 104 rDt~e~l~~y~~~~~-------~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~ 176 (201)
|+++..++|++... -++..+... -..+++.||++.+.. .. ....+||||++|+|+.+
T Consensus 91 -Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~---~~~v~k~yGv~~~~~---------g~---~~R~tFiID~~G~Ir~v 154 (211)
T 2pn8_A 91 -DSQFTHLAWINTPRRQGGLGPIRIPLLSDL---THQISKDYGVYLEDS---------GH---TLRGLFIIDDKGILRQI 154 (211)
T ss_dssp -SCHHHHHHHHTSCGGGTCCCSCSSCEEECT---TSHHHHHTTCEETTT---------TE---ECEEEEEECTTSBEEEE
T ss_pred -CCHHHHHHHHHHHHHHCCCCCCCCCEEECC---CCCHHHHCCCCCCCC---------CC---EEEEEEEECCCCEEEEE
T ss_conf -668879999976886278567664632157---653698849822457---------96---15689998999979999
Q ss_pred E----CCCCCHHHHHHHHHHHH
Q ss_conf 5----78988899999999998
Q gi|254780281|r 177 I----PYKDDSDSAIEKINRLI 194 (201)
Q Consensus 177 ~----~~~~~~~~i~~~i~~ll 194 (201)
+ +.+.+.+++++.|+.|-
T Consensus 155 ~~~~~~~gr~~~EvLr~l~aLq 176 (211)
T 2pn8_A 155 TLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp EEECTTBCCCHHHHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHH
T ss_conf 9848987869999999999865
No 47
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, structural genomics, NPPSFA; 1.85A {Aquifex aeolicus VF5}
Probab=99.70 E-value=8e-17 Score=121.05 Aligned_cols=142 Identities=15% Similarity=0.258 Sum_probs=105.0
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 66667870798299979677884996799996047-77654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|++|+.+++++++|||++++|+.. ||| .|+.++..+++..+++. .++++.||+ |+++.+
T Consensus 23 vGd~aPdF~l~~~dg~~v~L~d~~gk~vvl~f~~~~~~p-~C~~e~~~l~~~~~~~~----~~~vv~IS~----d~~~~~ 93 (171)
T 2yzh_A 23 VGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTP-VCETETKKFNEIMAGME----GVDVTVVSM----DLPFAQ 93 (171)
T ss_dssp TTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSH-HHHHHHHHHHHHTTTCT----TEEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCCCCHHHHHHHHHHCC----CCEEEEEEC----CCHHHH
T ss_conf 979998708788999898679968986999983676767-67541489999987437----978999968----999999
Q ss_pred HHHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE--EC---CCCCHH
Q ss_conf 777531368-642245898898988886090886225655677775258742069998589829998--57---898889
Q gi|254780281|r 111 KKFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV--IP---YKDDSD 184 (201)
Q Consensus 111 ~~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~--~~---~~~~~~ 184 (201)
++|.++.+. ++..+..... .+++.||+.+...... . .+...+||||++|+++-. .. ...+.+
T Consensus 94 ~~~~~~~~~~~~~l~~D~~~---~~~~~~g~~~~~~~~~------g---~~~ra~fvID~~G~I~~~~~~~~~~~~~~~~ 161 (171)
T 2yzh_A 94 KRFCESFNIQNVTVASDFRY---RDMEKYGVLIGEGALK------G---ILARAVFIIDKEGKVAYVQLVPEITEEPNYD 161 (171)
T ss_dssp HHHHHHTTCCSSEEEECTTT---CGGGGGTCBBCSSTTT------T---SBCCEEEEECTTSBEEEEEECSBTTSCCCCH
T ss_pred HHHHHHHCCCCCCCCCCCCH---HHHHHCCCEECCCCCC------C---CEEEEEEEECCCCEEEEEEEECCCCCCCCHH
T ss_conf 99999837877531245554---8999809673245467------9---7814899998999899999968889999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254780281|r 185 SAIEKINRLI 194 (201)
Q Consensus 185 ~i~~~i~~ll 194 (201)
++++.|++||
T Consensus 162 ~il~~lk~Ll 171 (171)
T 2yzh_A 162 EVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHC
T ss_conf 9999998459
No 48
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.70 E-value=2.9e-16 Score=117.69 Aligned_cols=132 Identities=20% Similarity=0.199 Sum_probs=90.8
Q ss_pred CCCCCEEEECC--CCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66787079829--9979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 34 RFNSDVHLVAQ--DGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 34 ~~~~~f~L~d~--~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
...|+|+|.+. +|+.+++++|+||+++|+||.|||| .|..+++.+.++++. .+.++.|+++...+ + ..
T Consensus 34 ~~aP~F~l~~ldg~~~~ls~~d~kGK~vvl~FwatwC~-~C~~e~p~l~~l~~~------~~~~~~v~~~~~~~--~-~~ 103 (176)
T 3kh7_A 34 KPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCP-SCRVEHPELTRLAEQ------GVVIYGINYKDDNA--A-AI 103 (176)
T ss_dssp SBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCH-HHHHHHHHHHHHHHT------TCEEEEEEESCCHH--H-HH
T ss_pred CCCCCCCCCCCCCCCEEECHHHHCCCEEEEEEECCCCC-CCHHHHHHHHHHHHC------CCCEEEEEEECCHH--H-HH
T ss_conf 95997263256899758669997999899998688899-627887999999870------77258998104288--9-99
Q ss_pred HHHHHC-CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 775313-6864224589889898888609088622565567777525874206999858982999857898889999999
Q gi|254780281|r 112 KFVQRF-SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI 190 (201)
Q Consensus 112 ~y~~~~-~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i 190 (201)
.+.... ...+..+..... .+++.|++. ..+.+||||++|+++..+.+..+.+.+.+.|
T Consensus 104 ~~~~~~~~~~~~~~~d~~~---~~~~~~~v~------------------~~Pt~~lID~~G~I~~~~~G~~~~~~l~~~i 162 (176)
T 3kh7_A 104 KWLNELHNPYLLSISDADG---TLGLDLGVY------------------GAPETYLIDKQGIIRHKIVGVVDQKVWREQL 162 (176)
T ss_dssp HHHHHTTCCCSEEEEETTC---HHHHHHTCC------------------SSCEEEEECTTCBEEEEEESCCCHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCHH---HHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHHH
T ss_conf 9999847875420016421---466505888------------------8885999938997999997579989999999
Q ss_pred HHHHHH
Q ss_conf 999851
Q gi|254780281|r 191 NRLITY 196 (201)
Q Consensus 191 ~~ll~~ 196 (201)
+++|++
T Consensus 163 ~~ll~~ 168 (176)
T 3kh7_A 163 APLYQQ 168 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 49
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.69 E-value=2.2e-16 Score=118.43 Aligned_cols=120 Identities=13% Similarity=0.264 Sum_probs=95.4
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
-....|++++.+++|+++++++++||+++|+||.|||| .|..+++.|.++++++.++ ..+.+++|+.| ++.+..+
T Consensus 4 ~~k~~P~~~~~~~~g~~v~l~~l~GK~vll~FwatWC~-pC~~e~p~L~~~~~~~~~~-~~~~vi~vs~d---~~~~~~~ 78 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDGEVEVKSLAGKLVFFYFSASWCP-PARGFTPQLIEFYDKFHES-KNFEVVFCTWD---EEEDGFA 78 (146)
T ss_dssp GGGTSTTCCEEEETTEEEEGGGGTTCEEEEEEECTTCH-HHHHHHHHHHHHHHHHTTT-TTEEEEEEECC---CSHHHHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHHC-CCCEEEEEECC---CCHHHHH
T ss_conf 55569985667279989859991998899999889898-8998739899999986422-69679998543---0479999
Q ss_pred HHHHHCCCCEECCC-CCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCC-CCEEEE
Q ss_conf 77531368642245-898898988886090886225655677775258742069998589-829998
Q gi|254780281|r 112 KFVQRFSDRIIGIS-GDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTA-GSIVGV 176 (201)
Q Consensus 112 ~y~~~~~~~~~~lt-g~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~-G~i~~~ 176 (201)
+|.+.. +|..+. ...+....+++.|++.. .++++|||++ |+++..
T Consensus 79 ~~~~~~--~~~~~~~~~~~~~~~l~~~y~v~~------------------iPt~ilid~~~G~vi~~ 125 (146)
T 1o8x_A 79 GYFAKM--PWLAVPFAQSEAVQKLSKHFNVES------------------IPTLIGVDADSGDVVTT 125 (146)
T ss_dssp HHHTTC--SSEECCGGGHHHHHHHHHHTTCCS------------------SSEEEEEETTTCCEEES
T ss_pred HHHHHC--CCCCCCCCCCHHHHHHHHHCCCCC------------------CCEEEEEECCCCEEEEE
T ss_conf 999978--985010045415578999869975------------------69799997999999861
No 50
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.69 E-value=9e-16 Score=114.71 Aligned_cols=142 Identities=12% Similarity=0.166 Sum_probs=107.5
Q ss_pred CCCCCCCEEEE---CCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 66667870798---2999796778849967999960-4777654468888776555430244333058876514333330
Q gi|254780281|r 32 NRRFNSDVHLV---AQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 32 ~~~~~~~f~L~---d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
..+.+|+|++. |.++++++++||+|||+||+|+ ..+|| +|+.++..+++.++++.+.+ ++++.||. |++
T Consensus 29 VG~~APdF~~~~~~~~~~k~vsL~d~~Gk~vVL~FyP~~~tp-~C~~e~~~f~~~~~~f~~~g--~~vigIS~----Ds~ 101 (220)
T 1zye_A 29 VTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTF-VCPTEIIAFSDKASEFHDVN--CEVVAVSV----DSH 101 (220)
T ss_dssp TTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCS-SSHHHHHHHHHHHHHHHHTT--EEEEEEES----SCH
T ss_pred CCCCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCC--EEEEECCC----CCH
T ss_conf 689399888514667973187489969983999983556797-68589999986455422688--38983156----556
Q ss_pred HHHHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--C
Q ss_conf 5777775313-------686422458988989888860908862256556777752587420699985898299985--7
Q gi|254780281|r 108 EVMKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--P 178 (201)
Q Consensus 108 e~l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~ 178 (201)
+..++|.+.. +-+|+.|.... ..+++.||++-+. ..+. ...+|||||+|+|+.++ +
T Consensus 102 ~sh~aw~~~~~~~~~~~~~~fPlLsD~~---~~vak~yGv~~~~---------~g~~---~R~tFiID~~G~Ir~~~~~~ 166 (220)
T 1zye_A 102 FSHLAWINTPRKNGGLGHMNIALLSDLT---KQISRDYGVLLEG---------PGLA---LRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSEEEECTT---SHHHHHTTCEETT---------TTEE---CEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCC---HHHHHHHCCCCCC---------CCEE---EEEEEEECCCCEEEEEEEEC
T ss_conf 7399998629974777770598886198---5899983897667---------8802---66899989999299999954
Q ss_pred --CCCCHHHHHHHHHHHHH
Q ss_conf --89888999999999985
Q gi|254780281|r 179 --YKDDSDSAIEKINRLIT 195 (201)
Q Consensus 179 --~~~~~~~i~~~i~~ll~ 195 (201)
.+.+.+++++.|+.|-.
T Consensus 167 ~~vgr~~~EvLr~i~alq~ 185 (220)
T 1zye_A 167 LPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp TTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
T ss_conf 8899899999999997311
No 51
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.68 E-value=2.9e-16 Score=117.72 Aligned_cols=139 Identities=21% Similarity=0.247 Sum_probs=105.0
Q ss_pred CCCCCEEEEC----CCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 6678707982----999796778849967999960-47776544688887765554302443330588765143333305
Q gi|254780281|r 34 RFNSDVHLVA----QDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 34 ~~~~~f~L~d----~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
...|+|++.+ ++++++++++|+|||++++|+ ..||| .|+.++..+++.++++.+.+ ++++.||+ |+++
T Consensus 5 ~~aP~F~~~~~~~~~~~~~vslsd~~GK~vVL~Fyp~~~tp-~C~~e~~~~~~~~~ef~~~g--~~vvgIS~----Ds~~ 77 (187)
T 1we0_A 5 TEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSF-VCPTELEDVQKEYAELKKLG--VEVYSVST----DTHF 77 (187)
T ss_dssp CBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCS-SCTHHHHHHHHHHHHHHHTT--EEEEEEES----SCHH
T ss_pred CCCCCCEEEEECCCCCCEEEEHHHHCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHHCC--EEEEEECC----CCHH
T ss_conf 71899887524289561486599979981999998788897-32578889999999986068--49997548----8546
Q ss_pred HHHHHHHHC----CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--C--CC
Q ss_conf 777775313----686422458988989888860908862256556777752587420699985898299985--7--89
Q gi|254780281|r 109 VMKKFVQRF----SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--P--YK 180 (201)
Q Consensus 109 ~l~~y~~~~----~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~--~~ 180 (201)
.+++|++.+ .-+++.+... -.+++++||++.... .+ ....+|+|||+|+|+..+ + .+
T Consensus 78 ~h~~~~~~~~~~~~~~fpll~D~---~~~v~~~ygv~~~~~---------g~---~~R~tfvID~~G~Ir~~~v~~~~~~ 142 (187)
T 1we0_A 78 VHKAWHENSPAVGSIEYIMIGDP---SQTISRQFDVLNEET---------GL---ADRGTFIIDPDGVIQAIEINADGIG 142 (187)
T ss_dssp HHHHHHHSCHHHHTCCSEEEECT---TCHHHHHTTCEETTT---------TE---ECEEEEEECTTSBEEEEEEECTTSC
T ss_pred HHHHHHHCCCCCCCCCCEECCCC---CCHHHHHCCCCCCCC---------CC---EEEEEEEECCCCEEEEEEEECCCCC
T ss_conf 56788743211366441011065---357999829960667---------93---5537999789996999998278889
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 88899999999998
Q gi|254780281|r 181 DDSDSAIEKINRLI 194 (201)
Q Consensus 181 ~~~~~i~~~i~~ll 194 (201)
.+.+++++.|+.|-
T Consensus 143 r~~~eiL~~l~alq 156 (187)
T 1we0_A 143 RDASTLINKVKAAQ 156 (187)
T ss_dssp CCTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHC
T ss_conf 89999999998502
No 52
>1e2y_A TRYP, tryparedoxin peroxidase; 2-Cys peroxiredoxin, oxidoreductase; 3.2A {Crithidia fasciculata} SCOP: c.47.1.10
Probab=99.68 E-value=6.1e-16 Score=115.74 Aligned_cols=140 Identities=15% Similarity=0.182 Sum_probs=104.1
Q ss_pred CCCCCCEE----EECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 66678707----982999796778849967999960-4777654468888776555430244333058876514333330
Q gi|254780281|r 33 RRFNSDVH----LVAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 33 ~~~~~~f~----L~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
...+|+|+ |.|.+|++++++||+|||+||+|+ ..+|| .|+.++..+++.++++.+. .++++.||. |++
T Consensus 9 G~~APdF~~~a~l~d~~g~~v~Lsd~~Gk~vVL~FyP~~~tp-~C~~e~~~~~~~~~~f~~~--g~~vvgIS~----Ds~ 81 (188)
T 1e2y_A 9 NHPAPEFDDMALMPNGTFKKVSLSSYKGKYVVLFFYPMDFTF-VCPTEIIQFSDDAKRFAEI--NTEVISCSC----DSE 81 (188)
T ss_dssp TSBCCCCEEEEECSSSCEEEEEGGGGTTSEEEEEECSCSSCS-SCCHHHHHHHHTHHHHHTT--TEEEEEEES----SCH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCC-CCCCCEEEHHHHHHHHCCC--CCEEEEECC----CCH
T ss_conf 997999705126159997388689969995999983554689-7653204001222333146--716886448----998
Q ss_pred HHHHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE---
Q ss_conf 5777775313-------686422458988989888860908862256556777752587420699985898299985---
Q gi|254780281|r 108 EVMKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--- 177 (201)
Q Consensus 108 e~l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--- 177 (201)
+...+|.+.. +-.|+.|..... .+++.||++.... .+. ...+|+||++|+|+..+
T Consensus 82 ~~h~~~~~~~~~~~~~~~~~fpll~D~~~---~v~~~ygv~~~~~---------g~~---~R~tFiID~~G~Ir~~~~~~ 146 (188)
T 1e2y_A 82 YSHLQWTSVDRKKGGLGPMAIPMLADKTK---AIARAYGVLDEDS---------GVA---YRGVFIIDPNGKLRQIIIND 146 (188)
T ss_dssp HHHHHHHHSCGGGTCCCCCSSCEEECTTC---HHHHHHTCEETTT---------TEE---CEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCC---HHHHHCCCCCCCC---------CCC---EEEEEEECCCCEEEEEEECC
T ss_conf 99998862267646756767650127310---9999859972678---------920---67999989999499999748
Q ss_pred -CCCCCHHHHHHHHHHHH
Q ss_conf -78988899999999998
Q gi|254780281|r 178 -PYKDDSDSAIEKINRLI 194 (201)
Q Consensus 178 -~~~~~~~~i~~~i~~ll 194 (201)
+.+.+.+++++.|+.|-
T Consensus 147 ~~~~r~~~evL~~l~alq 164 (188)
T 1e2y_A 147 MPIGRNVEEVIRLVEALQ 164 (188)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHC
T ss_conf 999989999999999725
No 53
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.68 E-value=6.5e-17 Score=121.61 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=100.4
Q ss_pred CEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC---CCCCCHHHHHHHH
Q ss_conf 7079829997967788499679999604777654468888776555430244333058876514---3333305777775
Q gi|254780281|r 38 DVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD---PKRDTPEVMKKFV 114 (201)
Q Consensus 38 ~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD---P~rDt~e~l~~y~ 114 (201)
.+.|.+.+|+.+++++++||++||+||+|||| .|..+++.|.++++++... .+.+++|+++ .+.+..+..+.|.
T Consensus 20 ~~~l~~~d~~~~~l~~~kgK~vvl~Fwa~wC~-~C~~e~p~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~ 96 (164)
T 2h30_A 20 MSTMKTADNRPASVYLKKDKPTLIKFWASWCP-LCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYA 96 (164)
T ss_dssp HTTCEETTSSBGGGGCCTTSCEEEEECCTTCH-HHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHT
T ss_pred CCEEECCCCCEEEHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCCC--EEEEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 65679899999648880988799999989898-6999999999999874354--05899986521442145788887766
Q ss_pred HHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 31368642245898898988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 115 QRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 115 ~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
......|..+..... .+++.||+. ..+.+|+||++|+++..+.+..+.+++.+.|+++.
T Consensus 97 ~~~~~~~p~~~D~~~---~l~~~~gi~------------------~~P~~~lid~~G~I~~~~~G~~~~~~i~~~l~~~~ 155 (164)
T 2h30_A 97 GLNYPKLPVVTDNGG---TIAQNLNIS------------------VYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TSCCTTSCEEECTTC---HHHHHTTCC------------------SSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HHCCCCCCEECCCHH---HHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 502555414206336---799984998------------------03889999799979999968999999999999999
Q ss_pred H
Q ss_conf 5
Q gi|254780281|r 195 T 195 (201)
Q Consensus 195 ~ 195 (201)
+
T Consensus 156 ~ 156 (164)
T 2h30_A 156 A 156 (164)
T ss_dssp C
T ss_pred H
T ss_conf 9
No 54
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.68 E-value=5.1e-16 Score=116.19 Aligned_cols=140 Identities=14% Similarity=0.162 Sum_probs=104.6
Q ss_pred CCCCCCEEE----ECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 666787079----82999796778849967999960-4777654468888776555430244333058876514333330
Q gi|254780281|r 33 RRFNSDVHL----VAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 33 ~~~~~~f~L----~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
...+|+|++ .|++|+.+++++|+|||+|++|+ ..+|| +|+.++..+++.++++.+. .++++.||. |++
T Consensus 9 g~pAPdFt~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~~~tp-~C~~E~~~f~~~~~~f~~~--g~~VigIS~----Ds~ 81 (202)
T 1uul_A 9 LHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTF-VCPTEICQFSDRVKEFSDI--GCEVLACSM----DSE 81 (202)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCS-HHHHHHHHHHHTHHHHHTT--TEEEEEEES----SCH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCC-CCCHHHHHHHHHHHHHCCC--CCEEEEECC----CCH
T ss_conf 998999834025369998588779969994999995554578-7635565455445554147--857887628----877
Q ss_pred HHHHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE---
Q ss_conf 5777775313-------686422458988989888860908862256556777752587420699985898299985---
Q gi|254780281|r 108 EVMKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--- 177 (201)
Q Consensus 108 e~l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--- 177 (201)
+..++|.+.. +-+|..|.... ..++++||++-.. .... ...+|||||+|+|+.++
T Consensus 82 ~s~~~~~~~~k~~~~~~~l~fpllsD~~---~~va~~YGv~~~~---------~g~~---~R~tfiID~~G~Ir~~~~~~ 146 (202)
T 1uul_A 82 YSHLAWTSIERKRGGLGQMNIPILADKT---KCIMKSYGVLKEE---------DGVA---YRGLFIIDPKQNLRQITVND 146 (202)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSCEEECTT---CHHHHHHTCEETT---------TTEE---CEEEEEECTTSBEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCC---CHHHHHCCCCCCC---------CCCE---EEEEEEECCCCEEEEEEECC
T ss_conf 6778888778875565688746230752---7899982980266---------8925---66899989999799999869
Q ss_pred -CCCCCHHHHHHHHHHHH
Q ss_conf -78988899999999998
Q gi|254780281|r 178 -PYKDDSDSAIEKINRLI 194 (201)
Q Consensus 178 -~~~~~~~~i~~~i~~ll 194 (201)
+.+.+.+++++.|+.|-
T Consensus 147 ~~~~r~~~EiLr~l~alq 164 (202)
T 1uul_A 147 LPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 999989999999999854
No 55
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in europe, spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.68 E-value=6.7e-16 Score=115.49 Aligned_cols=140 Identities=15% Similarity=0.141 Sum_probs=106.8
Q ss_pred CCCCCCCEEEECCCC---------------CEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 666678707982999---------------796778849967999960-4777654468888776555430244333058
Q gi|254780281|r 32 NRRFNSDVHLVAQDG---------------TDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNA 95 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G---------------~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~ 95 (201)
.....|+|+|.+.+| +++++++|+|||+||+|+ .+||| .|+.++..+++.++++.+.+ +++
T Consensus 6 vGd~aPdF~l~~~~g~~~~~~~~~~~~~~~~~vsL~d~~GK~vVL~FyP~~~tp-~C~~e~~~~~~~~~~f~~~g--~~v 82 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTF-VCPTEIAAFSKLNDEFEDRD--AQI 82 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSC-CCHHHHHHHHHTHHHHHTTT--EEE
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHCC--CEE
T ss_conf 889998868753568712333223556556387679969995999998188899-67699999998787674169--479
Q ss_pred EEEEECCCCCCHHHHHHHHHHCC----CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 87651433333057777753136----86422458988989888860908862256556777752587420699985898
Q gi|254780281|r 96 YFITVDPKRDTPEVMKKFVQRFS----DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAG 171 (201)
Q Consensus 96 v~IsvDP~rDt~e~l~~y~~~~~----~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G 171 (201)
+.||. |+++..++|++.+. -.+..|+..... +++.||++-. + + . -...+|+||++|
T Consensus 83 vgIS~----d~~~~~~~~~~~~~~~~~~~fplLsD~~~~---v~~~ygv~~~----~--~----~---~~r~tfiID~~G 142 (195)
T 2bmx_A 83 LGVSI----DSEFAHFQWRAQHNDLKTLPFPMLSDIKRE---LSQAAGVLNA----D--G----V---ADRVTFIVDPNN 142 (195)
T ss_dssp EEEES----SCHHHHHHHHHHCTTGGGCCSCEEECTTSH---HHHHHTCBCT----T--S----S---BCEEEEEECTTS
T ss_pred EEECC----CCHHHHHHHHHHHCCCCEEEEEEEECCCHH---HHHHCCCCCC----C--C----C---CEEEEEEECCCC
T ss_conf 85144----324658988864066650678487578769---9998299777----8--8----5---032599988999
Q ss_pred CEEEEEC----CCCCHHHHHHHHHHHH
Q ss_conf 2999857----8988899999999998
Q gi|254780281|r 172 SIVGVIP----YKDDSDSAIEKINRLI 194 (201)
Q Consensus 172 ~i~~~~~----~~~~~~~i~~~i~~ll 194 (201)
+|+..+. .+.+.+++++.|+.|-
T Consensus 143 ~I~~~~~~~~~~~~~~~evL~~l~~lq 169 (195)
T 2bmx_A 143 EIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 899999808988989999999999656
No 56
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.67 E-value=2.1e-15 Score=112.47 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=109.2
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|.+|+.+++++|+|||+||+|+. .+|| +|+.++..++..+..... ..++++.||. |++..+
T Consensus 24 VGd~APdF~L~~~dg~~vsLsd~~Gk~~Vl~f~P~~~T~-vC~~e~~~~~~~~~~~~~--~~~~vi~IS~----D~~~s~ 96 (224)
T 3keb_A 24 KGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDED-EHAGLLLLRETRRFLDSW--PHLKLIVITV----DSPSSL 96 (224)
T ss_dssp TTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCS-TTTSHHHHHHHHHHHTTC--TTSEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHC--CCCEEEEEEC----CCHHHH
T ss_conf 879998718888999998589938984999996478987-404899889988878760--5936999867----869999
Q ss_pred HHHHHHCC-CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE--E---CCCCCHH
Q ss_conf 77753136-8642245898898988886090886225655677775258742069998589829998--5---7898889
Q gi|254780281|r 111 KKFVQRFS-DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV--I---PYKDDSD 184 (201)
Q Consensus 111 ~~y~~~~~-~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~--~---~~~~~~~ 184 (201)
++|.+... .++..|..... ..++++||+......... . ....+||||++|+|+-. . +...+.+
T Consensus 97 ~~~~~~~~~~~~~~lsd~~~--~~~a~aYGv~~~~~~~~G--~-------~~Ra~FVID~~G~V~y~e~v~~i~~ePd~d 165 (224)
T 3keb_A 97 ARARHEHGLPNIALLSTLRG--RDFHKRYGVLITEYPLSG--Y-------TSPAIILADAANVVHYSERLANTRDFFDFD 165 (224)
T ss_dssp HHHHHHHCCTTCEEEESTTC--TTHHHHTTCBCCSTTSTT--C-------BCCEEEEECTTCBEEEEEECSBTTCCCCHH
T ss_pred HHHHHHCCCCCCCCCCCCCC--CHHHHHHCEEEECCCCCC--C-------CCCEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf 99999739888756433565--237786190750354478--5-------212799999999899999657645698999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999998514
Q gi|254780281|r 185 SAIEKINRLITYG 197 (201)
Q Consensus 185 ~i~~~i~~ll~~~ 197 (201)
++.+.|++....+
T Consensus 166 ~i~~al~~~~~~~ 178 (224)
T 3keb_A 166 AIEKLLQEGEQQA 178 (224)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999875
No 57
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.67 E-value=6.7e-16 Score=115.51 Aligned_cols=141 Identities=16% Similarity=0.254 Sum_probs=100.3
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|.+|+++++++|+||++|++||. .||| .|..++..+.+.++++.+ ..++.+|+| +++.+
T Consensus 20 vG~~APdF~L~~~dG~~~~Lsd~~GK~vVl~f~~~~~~p-~C~~~~~~l~~~~~~~~~----~~v~~is~d----~~~~~ 90 (167)
T 2jsy_A 20 VGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTG-VCDAQTRRFNEEAAKLGD----VNVYTISAD----LPFAQ 90 (167)
T ss_dssp TTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTS-HHHHTHHHHHHHHHHHSS----CEEEEEECS----SGGGT
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEECCCCCCC-CCCCHHHHHHHHHHHHHH----CCCCCCCCC----CHHHH
T ss_conf 979998848788999998679969975999966632556-456037899999998630----222232345----67899
Q ss_pred HHHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE-C----CCCCHH
Q ss_conf 777531368-6422458988989888860908862256556777752587420699985898299985-7----898889
Q gi|254780281|r 111 KKFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI-P----YKDDSD 184 (201)
Q Consensus 111 ~~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~-~----~~~~~~ 184 (201)
+++.+.... .+..+....+ ..+++.||+...... . ....+||||++|+|+-.. . ...+.+
T Consensus 91 ~~~~~~~~~~~~~~l~d~~~--~~~~~~ygv~~~~~~---------~---~~r~~fvID~~G~I~y~~~~~~~~~~~~~~ 156 (167)
T 2jsy_A 91 ARWCGANGIDKVETLSDHRD--MSFGEAFGVYIKELR---------L---LARSVFVLDENGKVVYAEYVSEATNHPNYE 156 (167)
T ss_dssp SCCGGGSSCTTEEEEEGGGT--CHHHHHTTCBBTTTC---------S---BCCEEEEECTTSCEEEEEECSBTTSCCCSH
T ss_pred HHHHHHHCCCCCEEECCCCC--HHHHHHHCCCCCCCC---------C---CCEEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf 99999839974145126764--479998197545678---------6---116999987999899999748988999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999985
Q gi|254780281|r 185 SAIEKINRLIT 195 (201)
Q Consensus 185 ~i~~~i~~ll~ 195 (201)
++++.+++||.
T Consensus 157 ~il~~l~~Llk 167 (167)
T 2jsy_A 157 KPIEAAKALVK 167 (167)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHCC
T ss_conf 99999998629
No 58
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.67 E-value=1.6e-15 Score=113.16 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=106.9
Q ss_pred CCCCCEEEEC-CCC--CEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 6678707982-999--796778849967999960-477765446888877655543024433305887651433333057
Q gi|254780281|r 34 RFNSDVHLVA-QDG--TDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 34 ~~~~~f~L~d-~~G--~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
...|+|++.. .+| .++++++|+|||++++|+ ..+|| +|+.++..+++.++++.+. +++++.||+ |+++.
T Consensus 5 ~kaP~F~~~a~~~g~~~~vslsd~~Gk~vVL~FyP~~ftp-~C~~E~~~~~~~~~~f~~~--~~~vvgIS~----D~~~s 77 (186)
T 1n8j_A 5 TKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTF-VSPTELGDVADHYEELQKL--GVDVYSVST----DTHFT 77 (186)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCS-HHHHHHHHHHHHHHHHHHT--TEEEEEEES----SCHHH
T ss_pred CCCCCCEEEEEECCEEEEEEHHHHCCCEEEEEEEECCCCC-CCHHHHHHHHHHHHHHCCC--CEEEEEECC----CCHHH
T ss_conf 7089987576678905797689969994999998157896-3799999999877874168--838986458----84665
Q ss_pred HHHHHHHC----CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC----CCC
Q ss_conf 77775313----6864224589889898888609088622565567777525874206999858982999857----898
Q gi|254780281|r 110 MKKFVQRF----SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP----YKD 181 (201)
Q Consensus 110 l~~y~~~~----~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~----~~~ 181 (201)
.++|++.+ ..+++.|..... .+++.||++.... .+ ....+|+|||+|+++..+- .+.
T Consensus 78 h~~w~~~~~~~~~~~fpllsD~~~---~v~k~ygv~~~~~---------g~---~~r~tfiID~~G~Ir~~~~~~~~~~r 142 (186)
T 1n8j_A 78 HKAWHSSSETIAKIKYAMIGDPTG---ALTRNFDNMREDE---------GL---ADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp HHHHHHHCTTGGGCCSEEEECTTS---HHHHHTTCEETTT---------TE---ECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHH---HHHHHCCCCCCCC---------CC---CEEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 899873132036656675423789---9999839975557---------86---13358999999979999983899898
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 8899999999998
Q gi|254780281|r 182 DSDSAIEKINRLI 194 (201)
Q Consensus 182 ~~~~i~~~i~~ll 194 (201)
+.+++++.|+.|-
T Consensus 143 ~~~EiLr~l~alq 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
T ss_conf 9999999999853
No 59
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.66 E-value=1.4e-15 Score=113.64 Aligned_cols=133 Identities=15% Similarity=0.136 Sum_probs=94.0
Q ss_pred CCCCCCEEEECCC--CCEECHHHH-CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 6667870798299--979677884-9967999960477765446888877655543024433305887651433333057
Q gi|254780281|r 33 RRFNSDVHLVAQD--GTDFSLSSL-YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 33 ~~~~~~f~L~d~~--G~~~~~~~~-~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
....|+|+|.+.+ |+.++.+++ +||+++|+||.|||+ .|..+++.+.++++.. +++++|++|.+ .+.
T Consensus 25 G~~aP~f~l~~ld~~~~~~~~~~~~kgk~vvl~FwatwC~-~C~~~~p~l~~l~~~~------~~~~~v~~~~~---~~~ 94 (168)
T 2b1k_A 25 GKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCP-TCRAEHQYLNQLSAQG------IRVVGMNYKDD---RQK 94 (168)
T ss_dssp TSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCH-HHHHHHHHHHHHHHTT------CCEEEEEESCC---HHH
T ss_pred CCCCCCCCCCCCCCCCCEECHHHHCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHH------CEEEEEEECCC---HHH
T ss_conf 9959973642467998182289963999899999888998-8998749999985430------41889990373---688
Q ss_pred HHHHHHHCC-CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 777753136-8642245898898988886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 110 MKKFVQRFS-DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 110 l~~y~~~~~-~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
.+.+.+.+. ..+..+..... .+++.|++.. .+.+||||++|+++..+.+..+.+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~------------------~P~~~lID~~G~I~~~~~G~~~~~~~~~ 153 (168)
T 2b1k_A 95 AISWLKELGNPYALSLFDGDG---MLGLDLGVYG------------------APETFLIDGNGIIRYRHAGDLNPRVWEE 153 (168)
T ss_dssp HHHHHHHHCCCCSEEEEETTC---HHHHHHTCCS------------------SSEEEEECTTSBEEEEEESCCCHHHHHH
T ss_pred HHHHHHHHCCCCCEEEECHHH---HHHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCHHHHHH
T ss_conf 899999858975346511132---6876468987------------------8879999599989999967899899999
Q ss_pred HHHHHHHH
Q ss_conf 99999851
Q gi|254780281|r 189 KINRLITY 196 (201)
Q Consensus 189 ~i~~ll~~ 196 (201)
.|+.+|++
T Consensus 154 ~i~~llek 161 (168)
T 2b1k_A 154 EIKPLWEK 161 (168)
T ss_dssp TTHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 60
>3hvv_A Thiol peroxidase, scavengase P20; oxidoreductase, TPX, peroxiredoxin, antioxidant; 1.75A {Escherichia coli k-12} PDB: 3hvs_A* 1qxh_A* 3i43_A* 3hvx_A
Probab=99.64 E-value=3.1e-15 Score=111.43 Aligned_cols=139 Identities=14% Similarity=0.153 Sum_probs=95.8
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666678707982999796778849967999960-4777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|.+|+.+++++|+||+++++|+ ..||| .|..++..+++.+.++. ++.++.||+ |+|+.+
T Consensus 20 vG~~APdFtL~d~~g~~vsLsd~~Gk~vVl~f~p~~~~p-~C~~e~~~~~~~~~~~~----~~~~v~IS~----d~~~~~ 90 (167)
T 3hvv_A 20 AGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTG-VSAASVRKFNQLATEID----NTVVLCISA----DLPFAQ 90 (167)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTST-THHHHHHHHHHHGGGSS----SEEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCCCHHHHHHHHHHHHC----CCCEEEEEC----CCHHHH
T ss_conf 989998738888999898479969985999983677877-67751677899999736----850898725----888999
Q ss_pred HHHHHHCCCCEEC-CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE-C----CCCCHH
Q ss_conf 7775313686422-458988989888860908862256556777752587420699985898299985-7----898889
Q gi|254780281|r 111 KKFVQRFSDRIIG-ISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI-P----YKDDSD 184 (201)
Q Consensus 111 ~~y~~~~~~~~~~-ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~-~----~~~~~~ 184 (201)
++|.+..+-.+.. +..+++ ..+++.||+........ .+ +...+|+||++|+|+-.. . ...+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~d~~--~~~~~~yg~~~~~~~~~------g~---~~r~~fvID~~G~I~y~~~~~~~~~~~~~d 159 (167)
T 3hvv_A 91 SRFCGAEGLNNVITLSTFRN--AEFLQAYGVAIADGPLK------GL---AARAVVVIDENDNVIFSQLVDEITTEPDYE 159 (167)
T ss_dssp HHHHHHHTCCSSEEEECTTC--HHHHHHTTCBBCSSTTT------TS---BCSEEEEECTTSBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHCCCCCCCCCCHHHH--HHHHHHHCCEECCCCCC------CC---CCCEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf 99999749987420203455--29999839461136437------84---013899997999899999848878899999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780281|r 185 SAIEKI 190 (201)
Q Consensus 185 ~i~~~i 190 (201)
++++.|
T Consensus 160 ~~l~~L 165 (167)
T 3hvv_A 160 AALAVL 165 (167)
T ss_dssp HHHHTT
T ss_pred HHHHHH
T ss_conf 999986
No 61
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.64 E-value=3.7e-15 Score=111.02 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=104.9
Q ss_pred CCCCCCEEEE---CCCCCEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 6667870798---2999796778849967999960-47776544688887765554302443330588765143333305
Q gi|254780281|r 33 RRFNSDVHLV---AQDGTDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 33 ~~~~~~f~L~---d~~G~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
...+|+|+|. |.+|+++++++|+|||++|+|+ ..+|| .|+.++..+++.++++.+.+ ++++.||. |+++
T Consensus 8 G~~APdF~l~~~~d~~~~~vsL~d~~Gk~~vL~fyp~~~tp-~C~~e~~~~~~~~~~f~~~g--~~vvgiS~----D~~~ 80 (197)
T 1qmv_A 8 GKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTF-VAPTEIIAFSNRAEDFRKLG--CEVLGVSV----DSQF 80 (197)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSS-HHHHHHHHHHHTHHHHHTTT--EEEEEEES----SCHH
T ss_pred CCCCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEECHHHCC-CCHHHHHHHHHHHHHHCCCC--EEEEECCC----CCHH
T ss_conf 89898889841458987388779969982999980035057-32045789999888741573--58972478----8578
Q ss_pred HHHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE----
Q ss_conf 777775313-------686422458988989888860908862256556777752587420699985898299985----
Q gi|254780281|r 109 VMKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI---- 177 (201)
Q Consensus 109 ~l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~---- 177 (201)
..++|++.. .-+|+.|..... .+++.||+.-... .. ....+|+|||+|+|+..+
T Consensus 81 ~h~a~~~~~~~~~~~~~~~fpllsD~~~---~va~~ygv~~~~~---------g~---~~R~tFiID~~G~Ir~~~~~~~ 145 (197)
T 1qmv_A 81 THLAWINTPRKEGGLGPLNIPLLADVTR---RLSEDYGVLKTDE---------GI---AYRGLFIIDGKGVLRQITVNDL 145 (197)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTC---HHHHHTTCEETTT---------TE---ECEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCHHH---HHHHHHCCCCCCC---------CE---EEEEEEEECCCCEEEEEEEECC
T ss_conf 7999876189738867767998516076---9999958987668---------80---5789999899991999997088
Q ss_pred CCCCCHHHHHHHHHHHH
Q ss_conf 78988899999999998
Q gi|254780281|r 178 PYKDDSDSAIEKINRLI 194 (201)
Q Consensus 178 ~~~~~~~~i~~~i~~ll 194 (201)
+.+.+.+++++.|+.|=
T Consensus 146 ~~gr~~~EiLr~l~alq 162 (197)
T 1qmv_A 146 PVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
T ss_conf 87859899999999755
No 62
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.64 E-value=2.4e-15 Score=112.14 Aligned_cols=139 Identities=18% Similarity=0.181 Sum_probs=97.7
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|.+|+.+++++|+|||++++|+. +||| .|..+++.+++.+.++. .+.++.||. |+++.+
T Consensus 18 vG~~aP~F~l~~~dg~~vsL~d~~Gk~~Vl~f~~~~~cp-~C~~e~~~l~~~~~~~~----~~~~v~Vs~----d~~~~~ 88 (163)
T 1psq_A 18 VGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTG-ICSTQTRRFNEELAGLD----NTVVLTVSM----DLPFAQ 88 (163)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSH-HHHHHHHHHHHHTTTCT----TEEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHC----CEEEEEEEE----CCHHHH
T ss_conf 989998749989999998589909987999983377576-03332999999987416----515999980----818999
Q ss_pred HHHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--CC---CCCHH
Q ss_conf 777531368-6422458988989888860908862256556777752587420699985898299985--78---98889
Q gi|254780281|r 111 KKFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--PY---KDDSD 184 (201)
Q Consensus 111 ~~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~~---~~~~~ 184 (201)
+++.+.... .+..+..... ..+++.||+...... . ....+||||++|+|+-.. +. ..+.+
T Consensus 89 ~~~~~~~~~~~~~~l~d~~~--~~~~~~yg~~~~~~~-----~-------~~Rs~fvID~~G~I~y~~~~~~~~~~~~~~ 154 (163)
T 1psq_A 89 KRWCGAEGLDNAIMLSDYFD--HSFGRDYALLINEWH-----L-------LARAVFVLDTDNTIRYVEYVDNINSEPNFE 154 (163)
T ss_dssp HHHHHHHTCTTSEEEECTTT--CHHHHHHTCBCTTTC-----S-------BCCEEEEECTTCBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHCCCCCCEEEECCCC--HHHHHHHHEECCCCC-----C-------EEEEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf 99999729966266530222--689987420015688-----0-------367999999999899999748988889999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780281|r 185 SAIEKINRL 193 (201)
Q Consensus 185 ~i~~~i~~l 193 (201)
++++.++.|
T Consensus 155 ~vl~~lk~L 163 (163)
T 1psq_A 155 AAIAAAKAL 163 (163)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHCC
T ss_conf 999999659
No 63
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.64 E-value=9.8e-16 Score=114.48 Aligned_cols=151 Identities=12% Similarity=0.102 Sum_probs=105.8
Q ss_pred CCEEEECCC-CCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC----CCCCCHHHHH
Q ss_conf 870798299-97967788499679999604777654468888776555430244333058876514----3333305777
Q gi|254780281|r 37 SDVHLVAQD-GTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD----PKRDTPEVMK 111 (201)
Q Consensus 37 ~~f~L~d~~-G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD----P~rDt~e~l~ 111 (201)
-+|++.|.+ |+++++++|+||++||.+|.|||+ .|+..++.|.++++++.+.+ +.++.+..+ -|-++.+.++
T Consensus 27 Ydf~~~dl~~G~~v~Ls~ykGKVvLIvN~AS~Cg-~~~~~y~~L~~L~~ky~~~g--f~Vl~fP~nqf~~qE~~~~~~i~ 103 (208)
T 2f8a_A 27 YAFSARPLAGGEPVSLGSLRGKVLLIENVASLGG-TTVRDYTQMNELQRRLGPRG--LVVLGFPCNQFGHQENAKNEEIL 103 (208)
T ss_dssp GGCEECBTTCSSCEEGGGGTTSEEEEEEECSSST-THHHHHHHHHHHHHHHGGGT--EEEEEEECCCSTTTTCSCHHHHH
T ss_pred EEEEEEECCCCCEECHHHCCCCEEEEEEEECCCC-CCHHHHHHHHHHHHHHCCCC--CEEEECCCCCCCCCCCCCHHHHC
T ss_conf 4168787799978768994998899998406778-87778999999999853389--67984367545555567444311
Q ss_pred HHHHH------CCCCEECC-----CC-CHHHHHHHH-HHCCEEEE-------------ECCCCCCCCCCCEEEEEEEEEE
Q ss_conf 77531------36864224-----58-988989888-86090886-------------2256556777752587420699
Q gi|254780281|r 112 KFVQR------FSDRIIGI-----SG-DPIDVMRVA-KNFRIYVN-------------NVLAEKSGVEEKYFVDHTTALL 165 (201)
Q Consensus 112 ~y~~~------~~~~~~~l-----tg-~~~~i~~l~-~~~~v~~~-------------~~~~~~~~~~~~y~i~H~~~~~ 165 (201)
++.+. |..++... .| +...+.+.. .+.+.... ..+........|+ .-|
T Consensus 104 ~~~~~~~~~~~~~~~f~v~~kv~VnG~~a~ply~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~WNF------tKF 177 (208)
T 2f8a_A 104 NSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNF------EKF 177 (208)
T ss_dssp HHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTT------CEE
T ss_pred CEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE------EEE
T ss_conf 02578502556454442144431237886579999997478876675100035311245767789755021------699
Q ss_pred EECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9858982999857898889999999999851
Q gi|254780281|r 166 LFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 166 lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
|||++|+++++|.+..+|+++.++|+.||++
T Consensus 178 LIDrdG~vv~r~~~~~~p~~le~~Ie~LL~~ 208 (208)
T 2f8a_A 178 LVGPDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp EECTTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred EECCCCCEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9999997998889999979999999999775
No 64
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.64 E-value=2.2e-15 Score=112.39 Aligned_cols=121 Identities=15% Similarity=0.299 Sum_probs=92.5
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
.....|+|++.+.+|.++++++|+||+++|+||.|||+ .|..+++.|.++++++.++ .++.++.|+.| ++.+..+
T Consensus 4 ~~k~~P~~~~~~~~~~~vsl~~l~GK~vvl~FwatwC~-~C~~e~p~l~~l~~k~~~~-~~~~vv~is~d---~~~~~~~ 78 (144)
T 1o73_A 4 LAKYLPGATNLLSKSGEVSLGSLVGKTVFLYFSASWCP-PCRGFTPVLAEFYEKHHVA-KNFEVVLISWD---ENESDFH 78 (144)
T ss_dssp GGGTSCTTCCBBCTTSCBCSGGGTTCEEEEEEECTTCH-HHHHHHHHHHHHHHHHTTT-TTEEEEEEECC---SSHHHHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHCCHHHHHHHHHHCCC-CCEEEEEEECH---HHHHHHH
T ss_conf 77789984577169989969990998799999978885-5665486699999874014-66489986111---5079999
Q ss_pred HHHHHCCCCEECCC-CCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCC-CCEEEEE
Q ss_conf 77531368642245-898898988886090886225655677775258742069998589-8299985
Q gi|254780281|r 112 KFVQRFSDRIIGIS-GDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTA-GSIVGVI 177 (201)
Q Consensus 112 ~y~~~~~~~~~~lt-g~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~-G~i~~~~ 177 (201)
+|.+... |..+. ...+...++++.|++. ..+.+||||++ |+++...
T Consensus 79 ~~~~~~~--~~~~~~~~~~~~~~~~~~y~v~------------------~~Pt~~liD~~~g~Iv~~~ 126 (144)
T 1o73_A 79 DYYGKMP--WLALPFDQRSTVSELGKTFGVE------------------SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHTTCS--SEECCTTCHHHHHHHHHHHTCC------------------SSSEEEEEETTTCCEEESC
T ss_pred HHHHHCC--CCEEEECCCCHHHHHHHHCCCC------------------CCCEEEEEECCCCEEEEEC
T ss_conf 9998778--6214642762357899975988------------------6898999979999998534
No 65
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.64 E-value=2.7e-15 Score=111.81 Aligned_cols=141 Identities=11% Similarity=0.150 Sum_probs=95.9
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
.....|+|+|.|.+|+.+++++|+|||+|++|+. ++|| .|..++..+.+ .+.+ ..+++++||+ |+++.+
T Consensus 20 vGd~aPdF~l~~~~G~~v~Lsd~~GK~vVl~F~p~~~~p-~C~~e~~~~~~---~~~~--~g~~vv~Is~----d~~~~~ 89 (175)
T 1xvq_A 20 VGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTP-VCATSVRTFDE---RAAA--SGATVLCVSK----DLPFAQ 89 (175)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSS-CCCHHHHHHHH---HHHH--TTCEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CCCCCCCHHHH---HHHH--CCCEEEEECC----CHHHHH
T ss_conf 869998848888999998769959988999986376678-99442312443---3120--3511444137----618889
Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE--EC---CCCCHHH
Q ss_conf 777531368642245898898988886090886225655677775258742069998589829998--57---8988899
Q gi|254780281|r 111 KKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV--IP---YKDDSDS 185 (201)
Q Consensus 111 ~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~--~~---~~~~~~~ 185 (201)
++|.+.....+..+..+. -..+.+.+++....-... ++. ...+||||++|+|+-. .+ ...+.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------g~~---~ratfiID~~G~I~y~~~~~~~~~~~~~~~ 158 (175)
T 1xvq_A 90 KRFCGAEGTENVMPASAF--RDSFGEDYGVTIADGPMA------GLL---ARAIVVIGADGNVAYTELVPEIAQEPNYEA 158 (175)
T ss_dssp TTCC------CEEEEECT--TSSHHHHTTCBBCSSTTT------TSB---CSEEEEECTTSBEEEEEECSBTTCCCCHHH
T ss_pred HHHHHHHCCCCCCCCCCH--HHHHHHHHCCEEECCCCC------CCC---CCEEEEECCCCEEEEEEECCCCCCCCCHHH
T ss_conf 999998488654543111--668999839166417726------858---578999948998999998078888989999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780281|r 186 AIEKINRL 193 (201)
Q Consensus 186 i~~~i~~l 193 (201)
+++.|+.|
T Consensus 159 il~al~~l 166 (175)
T 1xvq_A 159 ALAALGAT 166 (175)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
T ss_conf 99999974
No 66
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.64 E-value=4.7e-15 Score=110.38 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=104.5
Q ss_pred CCCCCEEEE----CCCCCEECHHHHCC-CEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 667870798----29997967788499-67999960-4777654468888776555430244333058876514333330
Q gi|254780281|r 34 RFNSDVHLV----AQDGTDFSLSSLYI-KPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 34 ~~~~~f~L~----d~~G~~~~~~~~~G-k~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
..+|+|+|. |++++++++++++| ||+|++|. ..+|| .|+.++..++..++++.+.+ ++++.||. |++
T Consensus 4 ~kAPdF~l~a~~~d~~~~~vsLsd~~G~k~vVL~FyP~~~tp-~Ct~E~~~~~~~~~~f~~~g--~~vvgiS~----Ds~ 76 (192)
T 2h01_A 4 GQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTF-VCPSEIIALDKALDSFKERN--VELLGCSV----DSK 76 (192)
T ss_dssp SBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCS-SCCHHHHHHHHTHHHHHHTT--EEEEEEES----SCH
T ss_pred CCCCCCEEECCCCCCCCCEEEHHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCC--EEEECCCC----CCC
T ss_conf 729982750323789742886699789987999997888898-43678899998766414652--47853555----330
Q ss_pred HHHHHHHHH-------CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC--
Q ss_conf 577777531-------36864224589889898888609088622565567777525874206999858982999857--
Q gi|254780281|r 108 EVMKKFVQR-------FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP-- 178 (201)
Q Consensus 108 e~l~~y~~~-------~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~-- 178 (201)
+..++|.+. .+-.|+.|..... .+++.||+.... .. -...+|+||++|+|+..+.
T Consensus 77 ~~h~~~~~~~~~~~~~~~~~fpllsD~~~---~v~k~yGv~~~~----------~~---~~R~tfiID~~g~I~~~~~~~ 140 (192)
T 2h01_A 77 FTHLAWKKTPLSQGGIGNIKHTLISDISK---SIARSYDVLFNE----------SV---ALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSEEEECTTS---HHHHHTTCEETT----------TE---ECCEEEEECTTSBEEEEEEGG
T ss_pred CCHHHHHHHHHHHCCCCCCCCCEECCCCC---HHHHHCCCCCCC----------CC---CEEEEEEECCCCEEEEEEECC
T ss_conf 03888876545415565777774036551---999982992366----------75---457899988998699999768
Q ss_pred --CCCCHHHHHHHHHHHH
Q ss_conf --8988899999999998
Q gi|254780281|r 179 --YKDDSDSAIEKINRLI 194 (201)
Q Consensus 179 --~~~~~~~i~~~i~~ll 194 (201)
.+.+.+++++.|+.|=
T Consensus 141 ~~~~~~~~EvLr~l~alq 158 (192)
T 2h01_A 141 LALGRSVDEILRLIDALQ 158 (192)
T ss_dssp GSSGGGHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHC
T ss_conf 999979999999999842
No 67
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.63 E-value=2.8e-15 Score=111.75 Aligned_cols=114 Identities=16% Similarity=0.280 Sum_probs=91.8
Q ss_pred CEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHC
Q ss_conf 70798299979677884996799996047776544688887765554302443330588765143333305777775313
Q gi|254780281|r 38 DVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRF 117 (201)
Q Consensus 38 ~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~ 117 (201)
...+.+.+|..+++++++||+++|+||.|||| +|..+++.|.++++++.++ .++.+++|+.| ++.+..++|.+..
T Consensus 10 ~~~~l~~~~~~v~l~~~~GK~vll~FwAtWC~-pC~~~~p~L~~l~~~~~~~-~~~~vi~vs~D---~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 10 STNVLKGAAADIALPSLAGKTVFFYFSASWCP-PSRAFTPQLIDFYKAHAEK-KNFEVMLISWD---ESAEDFKDYYAKM 84 (144)
T ss_dssp CSEEEETTEEEEEGGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHHTTT-TTEEEEEEECC---SSHHHHHHHHTTC
T ss_pred CHHHCCCCCCEECHHHHCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHCC-CCCEEEEEECC---CCHHHHHHHHHHC
T ss_conf 55441588978639991999899999878898-7987511089999986505-78489998676---2289999999978
Q ss_pred CCCEECCC-CCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCC-CCEEEE
Q ss_conf 68642245-898898988886090886225655677775258742069998589-829998
Q gi|254780281|r 118 SDRIIGIS-GDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTA-GSIVGV 176 (201)
Q Consensus 118 ~~~~~~lt-g~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~-G~i~~~ 176 (201)
+|..+. .+......+++.|++. -.++++|||++ |+++..
T Consensus 85 --~~~~~~~~d~~~~~~l~~~y~v~------------------~iPt~~lid~d~G~iv~~ 125 (144)
T 1i5g_A 85 --PWLALPFEDRKGMEFLTTGFDVK------------------SIPTLVGVEADSGNIITT 125 (144)
T ss_dssp --SSEECCTTCHHHHHHHHHHTTCC------------------SSSEEEEEETTTCCEEES
T ss_pred --CCCCEEEECCHHHHHHHHHCCCC------------------CCCEEEEEECCCCEEEEE
T ss_conf --98621110702546679877977------------------779899996899999853
No 68
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.62 E-value=1e-14 Score=108.33 Aligned_cols=139 Identities=14% Similarity=0.188 Sum_probs=103.7
Q ss_pred CCCCCCEEEE----CCCCCEECHHHHCC-CEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 6667870798----29997967788499-67999960-477765446888877655543024433305887651433333
Q gi|254780281|r 33 RRFNSDVHLV----AQDGTDFSLSSLYI-KPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDT 106 (201)
Q Consensus 33 ~~~~~~f~L~----d~~G~~~~~~~~~G-k~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt 106 (201)
...+|+|+|. |++++++++++++| ||++++|. ..+|| +|+.++..++..++++.+. .++++.||. |+
T Consensus 24 Gd~APdF~l~a~~gd~~~~~vsLsd~~G~k~vVL~FyP~d~tp-~C~~E~~~f~~~~~~f~~~--g~~vigIS~----Ds 96 (213)
T 2i81_A 24 GKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTF-VCPSEIIALDKALDAFHER--NVELLGCSV----DS 96 (213)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSS-HHHHHHHHHHHTHHHHHHT--TEEEEEEES----SC
T ss_pred CCCCCCCEEEEECCCCCCCEEEHHHHCCCCEEEEEEECCCCCC-CCCCCHHHHHHHHHHHCCC--CEEEEEEEC----CC
T ss_conf 6999886802132789743886799779987999998977799-7554304677766652455--358987744----67
Q ss_pred HHHHHHHHHH-------CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--
Q ss_conf 0577777531-------3686422458988989888860908862256556777752587420699985898299985--
Q gi|254780281|r 107 PEVMKKFVQR-------FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI-- 177 (201)
Q Consensus 107 ~e~l~~y~~~-------~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~-- 177 (201)
++..++|.+. .+.++..+..... .+++.||+..+. .. ....+|+|||+|+|+..+
T Consensus 97 ~~s~~~~~~~~~~~~~~~~~~fpllsD~~~---~v~k~yGv~~~~----------~~---~~R~tFvID~~g~I~~~~~~ 160 (213)
T 2i81_A 97 KYTHLAWKKTPLAKGGIGNIKHTLLSDITK---SISKDYNVLFDD----------SV---SLRAFVLIDMNGIVQHLLVN 160 (213)
T ss_dssp HHHHHHHHSSCGGGTCCCSCSSEEEECTTS---HHHHHTTCEETT----------TE---ECEEEEEECTTSBEEEEEEE
T ss_pred CCCHHHHHHHHHHHCCCCCCCEEECCCCCC---HHHHHCCCCCCC----------CC---CCEEEEEECCCCEEEEEEEC
T ss_conf 534666544478646765622414005665---999972997566----------84---41258998999969999977
Q ss_pred --CCCCCHHHHHHHHHHHH
Q ss_conf --78988899999999998
Q gi|254780281|r 178 --PYKDDSDSAIEKINRLI 194 (201)
Q Consensus 178 --~~~~~~~~i~~~i~~ll 194 (201)
+.+.+.+++++.|+.|=
T Consensus 161 ~~~~~r~~~EiL~~l~alq 179 (213)
T 2i81_A 161 NLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp CTTCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHC
T ss_conf 9999989999999999843
No 69
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.62 E-value=7.2e-15 Score=109.25 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=94.0
Q ss_pred CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 666667870798299979677884996799996047-7765446888877655543024433305887651433333057
Q gi|254780281|r 31 GNRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 31 ~~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
.....+|+|+|.|.+|+.+++++|+||+++++|+.. +|| .|..++..+++.++++. ++.++.||+ |+++.
T Consensus 18 ~vG~~aPdF~L~~~~g~~vsLsd~~Gk~vVl~f~p~~~tp-~C~~e~~~l~~~~~~~~----~~~v~~IS~----d~~~~ 88 (165)
T 1q98_A 18 QVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTG-VCATSVRKFNQQAAKLS----NTIVLCISA----DLPFA 88 (165)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSS-CCCHHHHHHHHHHHHST----TEEEEEEES----SCHHH
T ss_pred CCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEECCCCCCC-CCCHHHHHHHHHHHHHC----CCEEEEEEC----CCHHH
T ss_conf 8969998708788999998418989987999977646767-54566898999999853----987999817----86899
Q ss_pred HHHHHHHCCCC-EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf 77775313686-422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r 110 MKKFVQRFSDR-IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI 177 (201)
Q Consensus 110 l~~y~~~~~~~-~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~ 177 (201)
+++|.+..+.. +..+....+ ..+.+.||+......... + -...+||||++|+++-..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g--------~-~~r~~fvID~~G~I~y~~ 146 (165)
T 1q98_A 89 QARFCGAEGIENAKTVSTFRN--HALHSQLGVDIQTGPLAG--------L-TSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp HTTCTTTTTCTTEEEEECTTC--THHHHHTTCEECSSTTTT--------S-BCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHCCCCCEECCCCCC--CHHHHHHCEECCCCCCCC--------E-EEEEEEEECCCCEEEEEE
T ss_conf 999999709876277155445--569996173413564267--------1-677899998999899999
No 70
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution, oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.62 E-value=2e-15 Score=112.68 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=95.4
Q ss_pred CCCCEEEECCCC--------CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 678707982999--------796778849967999960477765446888877655543024433305887651433333
Q gi|254780281|r 35 FNSDVHLVAQDG--------TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDT 106 (201)
Q Consensus 35 ~~~~f~L~d~~G--------~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt 106 (201)
..|+|+|.+.+| ..+++++++|||++|+||.|||| .|...++.+.+.++.. ..++++|+++...
T Consensus 13 ~aPdf~l~~l~~~~~~~~~~~~~~~~~~~gk~vvl~fwa~wC~-~C~~~~p~~~~~~~~~-----~~~~i~v~~~~~~-- 84 (156)
T 1kng_A 13 PAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCV-PCHDEAPLLTELGKDK-----RFQLVGINYKDAA-- 84 (156)
T ss_dssp BCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCH-HHHHHHHHHHHHTTCT-----TSEEEEEEESCCH--
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCH-HHHHHCCCCCCCCCCC-----CCEEEEEEEECCH--
T ss_conf 3998866788886212565662479997999699999889998-6886445211234444-----3069999950352--
Q ss_pred HHHHHHHHHHCCCCEE-CCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHH
Q ss_conf 0577777531368642-245898898988886090886225655677775258742069998589829998578988899
Q gi|254780281|r 107 PEVMKKFVQRFSDRII-GISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDS 185 (201)
Q Consensus 107 ~e~l~~y~~~~~~~~~-~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~ 185 (201)
+..++|...++..|. .+..... .+++.|++.+ .+.+|+||++|+++..+.+..+.++
T Consensus 85 -~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~v~~------------------~P~~~liD~~G~i~~~~~G~~~~~~ 142 (156)
T 1kng_A 85 -DNARRFLGRYGNPFGRVGVDANG---RASIEWGVYG------------------VPETFVVGREGTIVYKLVGPITPDN 142 (156)
T ss_dssp -HHHHHHHHHHCCCCSEEEEETTS---HHHHHTTCCS------------------SCEEEEECTTSBEEEEEESCCCHHH
T ss_pred -HHHHHHHHHHCCCCCEEEECCCH---HHHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCHHH
T ss_conf -89999999839953024457752---7999818987------------------7829999499979999978899899
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999998514
Q gi|254780281|r 186 AIEKINRLITYG 197 (201)
Q Consensus 186 i~~~i~~ll~~~ 197 (201)
+.+.|+++|+|.
T Consensus 143 l~~~l~~~l~k~ 154 (156)
T 1kng_A 143 LRSVLLPQMEKA 154 (156)
T ss_dssp HHHTHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999997
No 71
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix K1} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.59 E-value=6.5e-15 Score=109.52 Aligned_cols=141 Identities=14% Similarity=0.136 Sum_probs=98.4
Q ss_pred CCCCCCCEEEECCCCCEECHHHH---CCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 66667870798299979677884---9967999960-4777654468888776555430244333058876514333330
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSL---YIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~---~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
.....|+|+|.+++|+ +.++++ +|||++++|+ ..||| +|+.++..+++.++++.+.+ ++++.||+| +.
T Consensus 7 vGd~aPdF~l~t~~G~-i~l~d~~~~kGk~vVLff~P~dftP-vCttEl~~~~~~~~ef~~~g--~~VigiS~D----s~ 78 (249)
T 3a2v_A 7 IGERFPEMEVTTDHGV-IKLPDHYVSQGKWFVLFSHPADFTP-VCTTEFVSFARRYEDFQRLG--VDLIGLSVD----SV 78 (249)
T ss_dssp TTSBCCCEEEEETTEE-EEETHHHHTTTCEEEEECCSCTTCH-HHHHHHHHHHHTHHHHHHTT--EEEEEEESS----CH
T ss_pred CCCCCCCEEEECCCCC-EEECHHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHCCC--CEEEEECCC----CH
T ss_conf 8099979698839998-9861465348998999998988898-67799999998888750488--279730588----88
Q ss_pred HHHHHHHHHC------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC---
Q ss_conf 5777775313------6864224589889898888609088622565567777525874206999858982999857---
Q gi|254780281|r 108 EVMKKFVQRF------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP--- 178 (201)
Q Consensus 108 e~l~~y~~~~------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~--- 178 (201)
+..++|.+.. .-.|..+... -..+++.||++... ... .. ...+|||||+|+|+..+.
T Consensus 79 ~sh~~w~~~~~~~~~~~l~fPllsD~---~~~vak~yGv~~~~----~~~----~~---~RatFIIDpdG~Ir~~~~~p~ 144 (249)
T 3a2v_A 79 FSHIKWKEWIERHIGVRIPFPIIADP---QGTVARRLGLLHAE----SAT----HT---VRGVFIVDARGVIRTMLYYPM 144 (249)
T ss_dssp HHHHHHHHHHHHHTCCCCCSCEEECT---TSHHHHHHTCCCTT----CSS----SC---CEEEEEECTTSBEEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCC---CHHHHHHCCCCCCC----CCC----CE---EEEEEEECCCCEEEEEEECCC
T ss_conf 89999987798734766566610125---40999986996555----557----44---525999999987999997689
Q ss_pred -CCCCHHHHHHHHHHHH
Q ss_conf -8988899999999998
Q gi|254780281|r 179 -YKDDSDSAIEKINRLI 194 (201)
Q Consensus 179 -~~~~~~~i~~~i~~ll 194 (201)
.+.+.+++++.|+.|=
T Consensus 145 ~~gRn~dEiLr~l~aLQ 161 (249)
T 3a2v_A 145 ELGRLVDEILRIVKALK 161 (249)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
T ss_conf 99989999999999865
No 72
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.58 E-value=9.4e-14 Score=102.53 Aligned_cols=145 Identities=12% Similarity=0.098 Sum_probs=105.6
Q ss_pred CCCCCCEEEECCCCCEECHHHHCC-CEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666787079829997967788499-67999960-4777654468888776555430244333058876514333330577
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYI-KPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~G-k~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....|+|+|.+++|+ ++++++.| ||++++|. ..+|| +|+.++..+++.++++.+.| ++++.||+ |+++..
T Consensus 6 Gd~APdF~l~~~~G~-i~L~d~~g~k~vVLfFyP~dfTp-vCttEl~~f~~~~~ef~~~g--~~vigIS~----Ds~~sh 77 (233)
T 2v2g_A 6 GEVFPNFEADSTIGK-LKFHDWLGNSWGVLFSHPRDFTP-VSTTELGRVIQLEGDFKKRG--VKLIALSC----DNVADH 77 (233)
T ss_dssp TCBCCCCEEEETTCC-EEHHHHHCSSEEEEEECSCSSCH-HHHHHHHHHHHTHHHHHHTT--EEEEEEES----SCHHHH
T ss_pred CCCCCCCEEECCCCC-EEEHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHCC--CEEEEECC----CCHHHH
T ss_conf 888888486468997-97599959986999996898898-58799999999888765248--25876537----877875
Q ss_pred HHHHHHC--------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--C--
Q ss_conf 7775313--------686422458988989888860908862256556777752587420699985898299985--7--
Q gi|254780281|r 111 KKFVQRF--------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--P-- 178 (201)
Q Consensus 111 ~~y~~~~--------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~-- 178 (201)
++|++.. +-+|..+... -.++++.||+.-....... .+.+ -...+|||||+|+|+..+ +
T Consensus 78 ~~w~~~~~~~~g~~~~l~FPLlsD~---~~~va~~yGv~~~~~~~~~-----~~~~-~~RatFIIDpdG~Ir~~~~~p~~ 148 (233)
T 2v2g_A 78 KEWSEDVKCLSGVKGDMPYPIIADE---TRELAVKLGMVDPDERTST-----GMPL-TCRAVFIIGPDKKLKLSILYPAT 148 (233)
T ss_dssp HHHHHHHHHHHTCCSSCSSCEEECT---TCHHHHHTTCEEEEEECTT-----CCEE-ECEEEEEECTTSBEEEEEEECTT
T ss_pred HHHHHHHHHHCCCCCCCEEEEEECC---CHHHHHHCCCCCCCCCCCC-----CCCC-EEEEEEEECCCCEEEEEEECCCC
T ss_conf 3355413541684347504036786---1089998199213246555-----5561-04789999999989999986899
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 8988899999999998
Q gi|254780281|r 179 YKDDSDSAIEKINRLI 194 (201)
Q Consensus 179 ~~~~~~~i~~~i~~ll 194 (201)
.+.+.+++++.|+.|-
T Consensus 149 ~gRn~~Eilr~ldaLQ 164 (233)
T 2v2g_A 149 TGRNFSEILRVIDSLQ 164 (233)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 8979999999999863
No 73
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.57 E-value=6.7e-15 Score=109.47 Aligned_cols=140 Identities=17% Similarity=0.271 Sum_probs=103.1
Q ss_pred CCCCCCEEEECCCCC-----EECHHHHCCC-EEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
Q ss_conf 666787079829997-----9677884996-7999960-47776544688887765554302443330588765143333
Q gi|254780281|r 33 RRFNSDVHLVAQDGT-----DFSLSSLYIK-PSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD 105 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~-----~~~~~~~~Gk-~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD 105 (201)
.+.+|+|++.+..|. .+++++++|| |++++|. ..+|| +|+.++..++..++++.+.+ ++++.||+ |
T Consensus 4 g~~APdF~l~a~~g~~~~~~~vsLsd~~gk~~vVL~FyP~dfTp-~C~~E~~~f~~~~~~f~~~g--~~vvgiS~----D 76 (198)
T 1zof_A 4 TKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTF-VCPTEIIAFDKRVKDFHEKG--FNVIGVSI----D 76 (198)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCS-SCCTHHHHHHHTHHHHHHTT--EEEEEEES----S
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHCCC--CEEECCCC----C
T ss_conf 87089878314468885464896389859986999998765699-89899999998888752278--17842467----7
Q ss_pred CHHHHHHHHHHCC-------CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 3057777753136-------864224589889898888609088622565567777525874206999858982999857
Q gi|254780281|r 106 TPEVMKKFVQRFS-------DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP 178 (201)
Q Consensus 106 t~e~l~~y~~~~~-------~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~ 178 (201)
+.+..+.|.+.+. -++..+... -..+++.||++... .. ....+|+|||+|+|+..+-
T Consensus 77 s~~sh~~~~~~~~~~~g~~~~~fpll~D~---~~~i~~~yGv~~~~----------~~---~~R~tfiID~~G~Ir~~~~ 140 (198)
T 1zof_A 77 SEQVHFAWKNTPVEKGGIGQVSFPMVADI---TKSISRDYDVLFEE----------AI---ALRGAFLIDKNMKVRHAVI 140 (198)
T ss_dssp CHHHHHHHHTSCGGGTCCCCCSSCEEECT---TSHHHHHTTCEETT----------TE---ECEEEEEEETTTEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCEEECC---CHHHHHHCCCCCCC----------CC---CCCEEEEECCCCEEEEEEE
T ss_conf 78889999765676167668743663779---32899974997666----------74---2324999879984999998
Q ss_pred ----CCCCHHHHHHHHHHHHH
Q ss_conf ----89888999999999985
Q gi|254780281|r 179 ----YKDDSDSAIEKINRLIT 195 (201)
Q Consensus 179 ----~~~~~~~i~~~i~~ll~ 195 (201)
.+.+.+++++.|+.|-.
T Consensus 141 ~~~~~gr~~~EvLr~l~alq~ 161 (198)
T 1zof_A 141 NDLPLGRNADEMLRMVDALLH 161 (198)
T ss_dssp ESSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
T ss_conf 589999899999999998520
No 74
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.55 E-value=2.4e-13 Score=100.04 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=104.9
Q ss_pred CCCCCCEEEECCCCC-EECHHHH-CCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 666787079829997-9677884-9967999960-477765446888877655543024433305887651433333057
Q gi|254780281|r 33 RRFNSDVHLVAQDGT-DFSLSSL-YIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~-~~~~~~~-~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
....|+|++.+.+|. +++++++ +|||++++|. ..+|| +|+.++..+++.++++.+.+ ++++.||+ |+++.
T Consensus 6 Gd~aPdF~l~~~~~~g~i~l~d~~~gk~vVLffyP~dfTp-vCttEl~~f~~~~~eF~~~g--~~vigiS~----Ds~~s 78 (220)
T 1xcc_A 6 GATFPNFTAKASGIDGDFELYKYIENSWAILFSHPNDFTP-VCTTELAELGKMHEDFLKLN--CKLIGFSC----NSKES 78 (220)
T ss_dssp TCBCCCCEECBTTCSSCEEHHHHTTTSEEEEECCSCTTCH-HHHHHHHHHHHTHHHHHTTT--EEEEEEES----SCHHH
T ss_pred CCCCCCCEEECCCCCCCEEEHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCC--EEEEECCC----CCHHH
T ss_conf 8858986826347898596489829986999996789998-38799999999898751489--79984178----87788
Q ss_pred HHHHHHHC-------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--C--
Q ss_conf 77775313-------686422458988989888860908862256556777752587420699985898299985--7--
Q gi|254780281|r 110 MKKFVQRF-------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--P-- 178 (201)
Q Consensus 110 l~~y~~~~-------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~-- 178 (201)
.++|.+.. +-+++.+.... .++++.||+......... .+.+. ...+|||||+|+++..+ +
T Consensus 79 H~~w~~~~~~~~~~~~l~fPllsD~~---~~va~~yGv~~~~~~~~~-----g~~~~-~R~tFiIDp~g~Ir~~~~~~~~ 149 (220)
T 1xcc_A 79 HDKWIEDIKYYGKLNKWEIPIVCDES---RELANKLKIMDEQEKDIT-----GLPLT-CRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp HHHHHHHHHHHHTCSCCCCCEEECTT---SHHHHHHTCEEEEEECTT-----SCEEE-CEEEEEECTTSBEEEEEEECTT
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCC---CHHHHHHCCCCCCCCCCC-----CCCCE-EEEEEEECCCCEEEEEEECCCC
T ss_conf 99998769874666787776113740---389998588653347765-----52313-0379999899979999983898
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 8988899999999998
Q gi|254780281|r 179 YKDDSDSAIEKINRLI 194 (201)
Q Consensus 179 ~~~~~~~i~~~i~~ll 194 (201)
.+.+.+++++.|+.|-
T Consensus 150 ~grn~~EiLr~l~alq 165 (220)
T 1xcc_A 150 TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 8989999999999877
No 75
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.53 E-value=1.2e-13 Score=101.84 Aligned_cols=123 Identities=11% Similarity=0.007 Sum_probs=90.5
Q ss_pred CCCCCCCEEEECCCCCEECHHHH--CCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 66667870798299979677884--9967999960-47776544688887765554302443330588765143333305
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSL--YIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~--~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
.+..+|+|+|.|++|+.++++++ +|++++++|+ .+||| .|..+++.+++.++++.+ .+.++.||. |+++
T Consensus 9 vGd~aP~F~L~~~~G~~v~l~~~~~~~~~vv~ff~p~~~cp-~C~~e~~~~~~~~~~~~~---~~~v~~vs~----d~~~ 80 (159)
T 2a4v_A 9 IGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTP-GSTRQASGFRDNYQELKE---YAAVFGLSA----DSVT 80 (159)
T ss_dssp TTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSH-HHHHHHHHHHHHHHHHTT---TCEEEEEES----CCHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHHCCCCCEEEEEECCCCCCC-CCHHHHHHHHHHHHHHCC---CCEEEEEEC----CHHH
T ss_conf 98988562888899899865997499768999837899899-744899999988998611---766999976----6189
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 7777753136864224589889898888609088622565567777525874206999858982999857
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP 178 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~ 178 (201)
.+++|++.++-+|..|..... .+++.||+.-. +.. . .. ..++|+++|+++..+-
T Consensus 81 ~~~~f~~~~~~~fp~l~D~~~---~v~~~ygv~~~--~~~-------~---~~-r~~fii~dg~i~~~~~ 134 (159)
T 2a4v_A 81 SQKKFQSKQNLPYHLLSDPKR---EFIGLLGAKKT--PLS-------G---SI-RSHFIFVDGKLKFKRV 134 (159)
T ss_dssp HHHHHHHHHTCSSEEEECTTC---HHHHHHTCBSS--SSS-------C---BC-CEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEECCC---HHHHHCCCCCC--CCC-------C---EE-EEEEEEECCCEEEEEE
T ss_conf 999999985998469994985---89997499966--668-------7---12-6999997893999999
No 76
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.49 E-value=2.8e-13 Score=99.64 Aligned_cols=146 Identities=13% Similarity=0.091 Sum_probs=105.0
Q ss_pred CCCCCCEEEECCCCCEECHHHHCC-CEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 666787079829997967788499-679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYI-KPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~G-k~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
...+|+|+|.++.|+ ++++++.| ||++++|.- .+|| +|++++..++..++++.+. +++++.||+ |+++..
T Consensus 8 G~~aPdF~l~~~~G~-v~L~d~~g~k~vVLfFyP~dfTp-vC~tE~~~f~~~~~ef~~~--g~~vlgiS~----Ds~~sH 79 (224)
T 1prx_A 8 GDVAPNFEANTTVGR-IRFHDFLGDSWGILFSHPRDFTP-VCTTELGRAAKLAPEFAKR--NVKLIALSI----DSVEDH 79 (224)
T ss_dssp TCBCCCCEEEETTEE-EEHHHHHTTSEEEEEEESCSSCH-HHHHHHHHHHHHHHHHHTT--TEEEEEEES----SCHHHH
T ss_pred CCCCCCCEECCCCCC-EEEHHHCCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHC--CCEEEEECC----CCHHHH
T ss_conf 899978681067897-97499869987999998999999-5716899999999999733--957987537----888999
Q ss_pred HHHHHHC----------CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC--
Q ss_conf 7775313----------6864224589889898888609088622565567777525874206999858982999857--
Q gi|254780281|r 111 KKFVQRF----------SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP-- 178 (201)
Q Consensus 111 ~~y~~~~----------~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~-- 178 (201)
++|.+.+ .-+|..|... -.++++.||++....... ..+.+. .-.+|||||+|+|+..+-
T Consensus 80 ~aw~~~~~~~~~~~~~~~l~fpLlsD~---~~~ia~~yGv~~~~~~~~-----~~~~~~-~RatFIIDpdg~Ir~~~~~~ 150 (224)
T 1prx_A 80 LAWSKDINAYNSEEPTEKLPFPIIDDR---NRELAILLGMLDPAEKDE-----KGMPVT-ARVVFVFGPDKKLKLSILYP 150 (224)
T ss_dssp HHHHHHHHHHTTSCCCSCCSSCEEECT---TCHHHHHTTSSCSCTTCS-----SSCCTT-CCEEEEECTTSBEEEEEECC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCEEECC---CCHHHHHHCCCCCCCCCC-----CCCCCE-EEEEEEECCCCEEEEEEEEC
T ss_conf 999976542025575667543666168---668999839833422456-----665402-35799988999799999807
Q ss_pred --CCCCHHHHHHHHHHHHH
Q ss_conf --89888999999999985
Q gi|254780281|r 179 --YKDDSDSAIEKINRLIT 195 (201)
Q Consensus 179 --~~~~~~~i~~~i~~ll~ 195 (201)
.+.+.+++++.|+.|-.
T Consensus 151 ~~~gR~~~EiLR~l~alq~ 169 (224)
T 1prx_A 151 ATTGRNFDEILRVVISLQL 169 (224)
T ss_dssp TTBCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
T ss_conf 9989787999999998876
No 77
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, structural genomics; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.2e-10 Score=83.71 Aligned_cols=152 Identities=13% Similarity=0.086 Sum_probs=105.5
Q ss_pred CCEEEECCCC-CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC----CCCCHHHHH
Q ss_conf 8707982999-79677884996799996047776544688887765554302443330588765143----333305777
Q gi|254780281|r 37 SDVHLVAQDG-TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP----KRDTPEVMK 111 (201)
Q Consensus 37 ~~f~L~d~~G-~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP----~rDt~e~l~ 111 (201)
-+|++.|.+| +.+++++|+||++||.-..++|. |......|.++++++.+.| +.+|.+-.+- |-++.+.++
T Consensus 36 ydf~~~~idg~e~v~L~~ykGKvvLIVNvAS~CG--~t~qy~~L~~L~~ky~~~G--l~IL~FPcnqF~~qep~~~~ei~ 111 (215)
T 2i3y_A 36 YDYEAIALNKNEYVSFKQYVGKHILFVNVATYCG--LTAQYPELNALQEELKPYG--LVVLGFPCNQFGKQEPGDNKEIL 111 (215)
T ss_dssp GGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSG--GGGGHHHHHHHHHHHGGGT--EEEEEEECCCSTTCCCSCHHHHH
T ss_pred EEEEEEECCCCCEECHHHCCCCEEEEEEECCCCC--CCCCHHHHHHHHHHHCCCC--EEEEEEECCCCCCCCCCCHHHHH
T ss_conf 5348772799956678992998899998046789--8746999999999846598--08998506433233899768998
Q ss_pred HHHHH------CCCCEEC-----CCCCH-HHHHHHHH-HCCEEEEE---------CCCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 77531------3686422-----45898-89898888-60908862---------2565567777525874206999858
Q gi|254780281|r 112 KFVQR------FSDRIIG-----ISGDP-IDVMRVAK-NFRIYVNN---------VLAEKSGVEEKYFVDHTTALLLFDT 169 (201)
Q Consensus 112 ~y~~~------~~~~~~~-----ltg~~-~~i~~l~~-~~~v~~~~---------~~~~~~~~~~~y~i~H~~~~~lid~ 169 (201)
+|.+. |..+|+. +.|+. ..+.+..+ +.+-.... .+........|+ .-||||+
T Consensus 112 ~f~~~~~~~~~~~v~Fpv~~ki~VNG~~ahply~~LK~~~p~~~~~~~~~~~~~~~~~~~~~I~WNF------~KFLIdr 185 (215)
T 2i3y_A 112 PGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNF------EKFLVGP 185 (215)
T ss_dssp HHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTT------CEEEECT
T ss_pred HHHHEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE------EEEEECC
T ss_conf 7664121466625431567776305887777999998618997632232100246767689668510------7899999
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 98299985789888999999999985143
Q gi|254780281|r 170 AGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 170 ~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
+|+++++|.+..+|+.|.++|+++|.+-+
T Consensus 186 dG~vV~Rf~p~~~p~~l~~~I~~lL~q~~ 214 (215)
T 2i3y_A 186 DGIPVMRWSHRATVSSVKTDILAYLKQFK 214 (215)
T ss_dssp TSCEEEEECTTSCHHHHHHHHHHHGGGC-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 99489898999998999999999997751
No 78
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consortium, SGC, oxidoreductase, polymorphism, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.32 E-value=8.2e-11 Score=84.78 Aligned_cols=152 Identities=9% Similarity=0.050 Sum_probs=107.1
Q ss_pred CCEEEECCCCCE-ECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC----CCCCHHHHH
Q ss_conf 870798299979-677884996799996047776544688887765554302443330588765143----333305777
Q gi|254780281|r 37 SDVHLVAQDGTD-FSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP----KRDTPEVMK 111 (201)
Q Consensus 37 ~~f~L~d~~G~~-~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP----~rDt~e~l~ 111 (201)
-+|+..|.+|++ +++++|+||++||.-..++|. |......|.++++++++.| +.++.+-.+= |.++.+.++
T Consensus 18 Ydf~~~~idG~e~i~L~~ykGKvvLIVNvAS~Cg--~t~qy~~L~~L~~ky~~~G--f~IL~FPcnqF~~qEp~~~~eI~ 93 (207)
T 2r37_A 18 YEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGG--LTGQYIELNALQEELAPFG--LVILGFPCNQFGKQEPGENSEIL 93 (207)
T ss_dssp GGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSST--TTTHHHHHHHHHHHHGGGT--EEEEEEECCCBTTCCCSCHHHHH
T ss_pred ECCEEECCCCCCCCCHHHHCCCEEEEEECCCCCC--CCCCHHHHHHHHHHHCCCC--EEEEEECCCCCCCCCCCCHHHHH
T ss_conf 4216634899834188991998899997777789--8734899999999846588--09999606874133899989999
Q ss_pred HHHH------HCCCCEEC-----CCCCH-HHHHHHH-HHCCEEEEEC---------CCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 7753------13686422-----45898-8989888-8609088622---------565567777525874206999858
Q gi|254780281|r 112 KFVQ------RFSDRIIG-----ISGDP-IDVMRVA-KNFRIYVNNV---------LAEKSGVEEKYFVDHTTALLLFDT 169 (201)
Q Consensus 112 ~y~~------~~~~~~~~-----ltg~~-~~i~~l~-~~~~v~~~~~---------~~~~~~~~~~y~i~H~~~~~lid~ 169 (201)
+|.+ .|..+|+. +.|+. ..+.+.. ...+-..... +........|+ .-||||+
T Consensus 94 ~f~~~~~~~~~~~v~Fpv~~kv~VnG~~ahPly~~Lk~~~~~~~~~~~~~~~~~~~~~~~~~I~WNF------~KFLId~ 167 (207)
T 2r37_A 94 PTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF------EKFLVGP 167 (207)
T ss_dssp HHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT------CEEEECT
T ss_pred HHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE------EEEEECC
T ss_conf 9998611256605541456788603887785899998628986543454100035656689765123------8999989
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 98299985789888999999999985143
Q gi|254780281|r 170 AGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 170 ~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
+|+++++|.+..+|.+|.++|+.||.++.
T Consensus 168 ~G~vv~Rf~~~~~p~~i~~~I~~lL~~~~ 196 (207)
T 2r37_A 168 DGIPIMRWHHRTTVSNVKMDILSYMRRQA 196 (207)
T ss_dssp TSCEEEEECTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99889887999998999999999998777
No 79
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.03 E-value=4.1e-09 Score=74.51 Aligned_cols=143 Identities=9% Similarity=-0.023 Sum_probs=87.6
Q ss_pred CCCCCCEEEEC-CCCCEECHHHH-CCCEEEEEE-ECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 66678707982-99979677884-996799996-0477765446888877655543024433305887651433333057
Q gi|254780281|r 33 RRFNSDVHLVA-QDGTDFSLSSL-YIKPSIVFF-GFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 33 ~~~~~~f~L~d-~~G~~~~~~~~-~Gk~~li~F-~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
....|+|+|.+ ..|++++++++ +|||++++| -..+|| +|+.++..+...+....+.+....++.++++ ++..
T Consensus 6 Gd~aPdftl~~~~~~~~v~l~d~~~gk~vVl~f~P~afTp-~Ct~e~~~~~~~~~~~~~~~~~~~~~~~s~~----~~~~ 80 (167)
T 2wfc_A 6 GDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTP-GSSKTHLPGYVEQAAAIHGKGVDIIACMAVN----DSFV 80 (167)
T ss_dssp TCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCH-HHHHTHHHHHHHTHHHHHHTTCCEEEEEESS----CHHH
T ss_pred CCCCCCEEEEECCCCCEEEHHHHHCCCEEEEEEEECCCCC-CCHHHCCHHHHHHHHHHHHCCCCCEEEECCC----CHHH
T ss_conf 7999872886258997997799859985999996564488-7444316289874655542046405883156----5799
Q ss_pred HHHHHHHC--CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC----C---
Q ss_conf 77775313--68642245898898988886090886225655677775258742069998589829998578----9---
Q gi|254780281|r 110 MKKFVQRF--SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY----K--- 180 (201)
Q Consensus 110 l~~y~~~~--~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~----~--- 180 (201)
.+++.... ..++.++... -..++++||+............ -...+|+|| +|+++..+-. .
T Consensus 81 ~~~~~~~~~~~~~~~llsD~---~~~~~~~~g~~~d~~~~~~~~~-------~~R~tfIid-dG~I~~~~ve~~~~~~~~ 149 (167)
T 2wfc_A 81 MDAWGKAHGADDKVQMLADP---GGAFTKAVDMELDLSAVLGNVR-------SKRYSLVIE-DGVVTKVNVEPDGKGLTC 149 (167)
T ss_dssp HHHHHHHTTCTTTSEEEECT---TSHHHHHTTCEECCHHHHSSCE-------ECCEEEEEE-TTEEEEEEECTTSSSSST
T ss_pred HHHHHHHHCCCCCCCCCCCC---HHHHHHHCCCEEECCCCCCCCE-------EEEEEEEEE-CCEEEEEEEECCCCCCCC
T ss_conf 87177774468664303457---2499997099881564789756-------889999997-999999999789987777
Q ss_pred CCHHHHHHHHH
Q ss_conf 88899999999
Q gi|254780281|r 181 DDSDSAIEKIN 191 (201)
Q Consensus 181 ~~~~~i~~~i~ 191 (201)
.+++++++.|+
T Consensus 150 s~a~~vL~~Lk 160 (167)
T 2wfc_A 150 SLAPNILSQLG 160 (167)
T ss_dssp TSHHHHHHHHC
T ss_pred CCHHHHHHHCC
T ss_conf 75999999767
No 80
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.02 E-value=1.1e-09 Score=78.06 Aligned_cols=131 Identities=12% Similarity=0.128 Sum_probs=84.4
Q ss_pred CCCCCCCEEEEC-CCCCEECHHHH-CCCEEEEEEE-CCCCCCCCHHH-HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH
Q ss_conf 666678707982-99979677884-9967999960-47776544688-88776555430244333058876514333330
Q gi|254780281|r 32 NRRFNSDVHLVA-QDGTDFSLSSL-YIKPSIVFFG-FTNCSAVCPTT-LSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP 107 (201)
Q Consensus 32 ~~~~~~~f~L~d-~~G~~~~~~~~-~Gk~~li~F~-~T~Cpd~Cp~~-l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~ 107 (201)
.....|+|+|.+ ++|++++++++ +|||++++|. ..+|| .|+.+ ++.....++.+.+.+. ..++.+|+ |++
T Consensus 17 VGd~~Pdf~l~~~~~~~~v~l~d~~~gk~vvL~fyP~~fTp-~Ct~e~~~~~~~~~~~~~~~g~-~~v~~is~----d~~ 90 (173)
T 3mng_A 17 VGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTP-GCSKTHLPGFVEQAEALKAKGV-QVVACLSV----NDA 90 (173)
T ss_dssp TTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCH-HHHHTHHHHHHHTHHHHHTTTC-CEEEEEES----SCH
T ss_pred CCCCCCCEEEEECCCCCEEEHHHHHCCCEEEEEEEECCCCC-CEECEECHHHHHHHHHHHHCCC-CEEEEEEC----CCH
T ss_conf 88999970887379996987799849986999981189986-4415660067763578987499-34899624----998
Q ss_pred HHHHHHHHHCC--CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf 57777753136--86422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r 108 EVMKKFVQRFS--DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI 177 (201)
Q Consensus 108 e~l~~y~~~~~--~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~ 177 (201)
..+++|..... .++.++... -..++++||+...+....... ..-+...++|+++|+++..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~lsD~---~~~~~~~~g~~~~~~~~g~~~------~~~~~R~~~I~~dG~V~~~~ 153 (173)
T 3mng_A 91 FVTGEWGRAHKAEGKVRLLADP---TGAFGKETDLLLDDSLVSIFG------NRRLKRFSMVVQDGIVKALN 153 (173)
T ss_dssp HHHHHHHHHTTCTTTCEEEECT---TCHHHHHHTCBCCSTTHHHHS------SCCBCCEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCC---HHHHHHHHCCEEECCCCCCCC------CCEEEEEEEEECCCEEEEEE
T ss_conf 9999999851888238752684---749999849827335577567------88899999998989699999
No 81
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.84 E-value=2.1e-08 Score=70.32 Aligned_cols=129 Identities=15% Similarity=0.119 Sum_probs=84.8
Q ss_pred CCCCCCCEEEE----CCCCCEECHHHH-CCCEEEEEEEC-CCCCCCCHHH-HHHHHHHHHHHCCCCCCEEEEEEEECCCC
Q ss_conf 66667870798----299979677884-99679999604-7776544688-88776555430244333058876514333
Q gi|254780281|r 32 NRRFNSDVHLV----AQDGTDFSLSSL-YIKPSIVFFGF-TNCSAVCPTT-LSRLDRLLKQVDPTGTLLNAYFITVDPKR 104 (201)
Q Consensus 32 ~~~~~~~f~L~----d~~G~~~~~~~~-~Gk~~li~F~~-T~Cpd~Cp~~-l~~l~~~~~~l~~~~~~v~~v~IsvDP~r 104 (201)
.....|+|+|. +.++++++++++ +|||++++|.- .+.| +|+.+ ++......+.+.+.+. ..++.||+
T Consensus 6 VGd~~Pdf~l~~~~~~~~~~~~~l~~~~~gk~vvl~f~P~afTp-~Ct~e~~~~~~~~~~~~~~~g~-~~v~~isv---- 79 (162)
T 1tp9_A 6 VGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTP-TCSLKHVPGFIEKAGELKSKGV-TEILCISV---- 79 (162)
T ss_dssp TTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCH-HHHHTHHHHHHHHHHHHHHTTC-CCEEEEES----
T ss_pred CCCCCCCEEEEEECCCCCCCEEEHHHHHCCCEEEEEEEECCCCC-HHHCCCCCHHHHHHHHHHHCCC-CEEEEEEC----
T ss_conf 87988863898553789961887899839997999996676787-3111125367762358987588-35899933----
Q ss_pred CCHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf 33057777753136--86422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r 105 DTPEVMKKFVQRFS--DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI 177 (201)
Q Consensus 105 Dt~e~l~~y~~~~~--~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~ 177 (201)
|++...++|.+... ..+.++.... ..+++++|+........ .+...| -.+|||| +|+++..+
T Consensus 80 d~~~~~~~~~~~~~~~~~~~~lsD~~---~~~~~a~g~~~~~~~~g------~g~~s~-R~~fiId-dg~I~~~~ 143 (162)
T 1tp9_A 80 NDPFVMKAWAKSYPENKHVKFLADGS---ATYTHALGLELDLQEKG------LGTRSR-RFALLVD-DLKVKAAN 143 (162)
T ss_dssp SCHHHHHHHHHTCTTCSSEEEEECTT---SHHHHHTTCEEEETTTT------SEEEEC-CEEEEEE-TTEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCC---HHHHHHCCCEECCCCCC------CCCEEE-EEEEEEE-CCEEEEEE
T ss_conf 99899999987542555423232741---56787568444155576------842479-9999998-99999999
No 82
>3f9u_A Putative exported cytochrome C biogenesis- related protein; structural genomics, PSI-2, protein structure initiative; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.79 E-value=2.3e-09 Score=76.08 Aligned_cols=124 Identities=12% Similarity=0.063 Sum_probs=71.5
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHH---HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCC-CCEE
Q ss_conf 796778849967999960477765446888877---655543024433305887651433333057777753136-8642
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRL---DRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFS-DRII 122 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l---~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~-~~~~ 122 (201)
+.+.++..+||+++|+||.|||+ .|..+-..+ ..+.+.+. .++.++.|.+|-..+. ....+... ....
T Consensus 38 ~al~~Ak~~gKpvll~F~A~WC~-~C~~m~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~~~----~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 38 LGMEYARQHNKPVMLDFTGYGCV-NCRKMELAVWTDPKVSSIIN---NDYVLITLYVDNKTPL----TEPVKIMENGTER 109 (172)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCH-HHHHHHHHTTTSHHHHHHHH---HHCEEEEEETTCCCEE----EEEEEEEETTEEE
T ss_pred HHHHHHHHCCCEEEEEEECCCCH-HHHHHHHHCCCCHHHHHHCC---CCEEEEEEECCCCCCH----HHHHHHHHCCCCC
T ss_conf 99999998399399999767288-78987664024888887433---6549999978898520----1788875213433
Q ss_pred CC-CCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC-CCCHHHHHHHHHHHHHH
Q ss_conf 24-5898898988886090886225655677775258742069998589829998578-98889999999999851
Q gi|254780281|r 123 GI-SGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY-KDDSDSAIEKINRLITY 196 (201)
Q Consensus 123 ~l-tg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~-~~~~~~i~~~i~~ll~~ 196 (201)
.. ....+....++..|++. -.+++++|||+|+++....+ ..+.+...+.|++.|.+
T Consensus 110 ~~~~~~~~~~~~~~~~y~v~------------------g~Pt~v~id~~Gkii~~~~G~~~~~~~f~~~L~~~l~~ 167 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGAN------------------AQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCC------------------CSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCC------------------CCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 11244412679999973888------------------86569999999989505557888999999999999999
No 83
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae tw-183}
Probab=98.79 E-value=2e-08 Score=70.38 Aligned_cols=123 Identities=11% Similarity=0.195 Sum_probs=79.1
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 870798299979677884996799996047-7765446888877655543024433305887651433333057777753
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQ 115 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~ 115 (201)
.+..+.+- .+.+.++..+||+++|+|+.| ||| .|....+.+-+..+.....+ ..+++|.+|.+..... ...+
T Consensus 29 ~~l~w~~~-~eal~~A~~~~Kpvli~F~~s~WC~-~C~~~~~~~~~~~~~~~~~~--~~~v~v~iD~~~~~~~-~~~~-- 101 (154)
T 2ju5_A 29 ANLQWESY-AEALEHSKQDHKPIGLFFTGSDWCM-WCIKMQDQILQSSEFKHFAG--VHLHMVEVDFPQKNHQ-PEEQ-- 101 (154)
T ss_dssp CCCCEECH-HHHHHHHHHHCCCEEEEEECTTTCH-HHHHHHHHTTTSHHHHHHHH--HHCEEEEEECCSSCCC-CHHH--
T ss_pred CCCCEEEH-HHHHHHHHHCCCCEEEEEECCCCCC-CHHHHHHHHHHHHHHHHHHH--CCEEEEECCCCCCCCC-CHHH--
T ss_conf 76760348-9999999973997999997567770-43444368786699998730--7589997667756543-1455--
Q ss_pred HCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC-CHHHHHHHHHHHH
Q ss_conf 136864224589889898888609088622565567777525874206999858982999857898-8899999999998
Q gi|254780281|r 116 RFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD-DSDSAIEKINRLI 194 (201)
Q Consensus 116 ~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~-~~~~i~~~i~~ll 194 (201)
...-..+++.|++. -.+.++++|++|+++...++.. ++++..+.|+++|
T Consensus 102 ------------~~~~~~l~~~~~v~------------------g~Pt~v~id~~G~~i~~~gy~~~~~~~~~~~l~~~l 151 (154)
T 2ju5_A 102 ------------RQKNQELKAQYKVT------------------GFPELVFIDAEGKQLARMGFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp ------------HHHHHHHHHHTTCC------------------SSSEEEEECTTCCEEEEECCCTTCHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHCCCC------------------CCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf ------------54459999753322------------------697799998999799862674599999999999986
Q ss_pred HH
Q ss_conf 51
Q gi|254780281|r 195 TY 196 (201)
Q Consensus 195 ~~ 196 (201)
..
T Consensus 152 k~ 153 (154)
T 2ju5_A 152 KL 153 (154)
T ss_dssp TC
T ss_pred CC
T ss_conf 64
No 84
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.77 E-value=9.1e-09 Score=72.43 Aligned_cols=99 Identities=16% Similarity=0.296 Sum_probs=73.8
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHH
Q ss_conf 88499679999604777654468888776555430244333058876514333330577777531368642245898898
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDV 131 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i 131 (201)
...+||+++|+||.+||| .|....+.+.++.+.+.. +..++.+.+|.+. -
T Consensus 22 ~~~~~k~vlv~f~a~wC~-~C~~~~~~l~~~~~~~~~---~~~~~~~~vd~~~--------------------------~ 71 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCP-YCVEMQKELSYVSKEREG---KFNIYYARLEEEK--------------------------N 71 (126)
T ss_dssp TCCSSSCEEEEEECSSCH-HHHHHHHHHHHHHHHSSS---SCEEEEEETTSSH--------------------------H
T ss_pred HHHCCCEEEEEEECCCCC-CCCCCCHHHHHHHHHHCC---CCEEEEEEECCCC--------------------------C
T ss_conf 987899299999868888-855658115444333236---5148888503323--------------------------2
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH-HHHCC
Q ss_conf 98888609088622565567777525874206999858982999857898889999999999-85143
Q gi|254780281|r 132 MRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL-ITYGN 198 (201)
Q Consensus 132 ~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l-l~~~~ 198 (201)
..+++.|++.. .++++++|++|+.+..+.+..+.+++.+.|++| +.+|.
T Consensus 72 ~~~~~~~~v~~------------------~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~l~~k~~~ 121 (126)
T 2l57_A 72 IDLAYKYDANI------------------VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp HHHHHHTTCCS------------------SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCCCC
T ss_pred HHHHHHCCCCC------------------CCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 03455256777------------------896999958997999996899999999999982866676
No 85
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.1
Probab=98.73 E-value=5.9e-10 Score=79.61 Aligned_cols=117 Identities=12% Similarity=0.014 Sum_probs=74.4
Q ss_pred CHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHH
Q ss_conf 77884996799996047776544688887765554302443330588765143333305777775313686422458988
Q gi|254780281|r 50 SLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPI 129 (201)
Q Consensus 50 ~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~ 129 (201)
++++++||++++.||.|||| .|..+++.+.+++++.+ ++.++.|++| ++++..+.|.......++.+...
T Consensus 48 ~l~~~~~~~~~l~f~atWC~-pC~~e~P~l~~l~~~~~----~~~~~~i~~d---~~~~~~~~~~~~~~~~~~~~~~~-- 117 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCP-DCQINLAALDFAQRLQP----NIELAIISKG---RAEDDLRQRLALERIAIPLVLVL-- 117 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCH-HHHHHHHHHHHHHHHCT----TEEEEEECHH---HHHHHTTTTTTCSSCCSSEEEEE--
T ss_pred HHHHCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CCEEEEEECC---CCHHHHHHHHHHCCCCCCEEEEE--
T ss_conf 99845898499999989697-58998999999999889----9839999787---89999999998279887759997--
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 130 DVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 130 ~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.++ ....+.+...+..+++|++|.+..+..+..+. +..+++..+|..
T Consensus 118 -----------------d~~--~~~~~~~~~~P~t~~~~~~g~~~~~~~G~~~~-~~~~eil~~l~~ 164 (167)
T 1z6n_A 118 -----------------DEE--FNLLGRFVERPQAVLDGGPQALAAYKAGDYLE-HAIGDVLAIIEG 164 (167)
T ss_dssp -----------------CTT--CCEEEEEESSCHHHHHHCHHHHHHHHTTTTHH-HHHHHHHHHHHH
T ss_pred -----------------CCC--CCEEEEEECCCEEEEECCCCEEEEEECCCCCH-HHHHHHHHHHHH
T ss_conf -----------------798--31521442277699987998299985164689-999999999864
No 86
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredoxin fold, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=6.8e-08 Score=67.17 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=69.8
Q ss_pred EECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCC
Q ss_conf 96778849967999960477765446888877655543024433305887651433333057777753136864224589
Q gi|254780281|r 48 DFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGD 127 (201)
Q Consensus 48 ~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~ 127 (201)
.+....-+||+++|+||.+||+ .|....+.+......... .+.+++++.+|-+.+.
T Consensus 19 ~~~~a~~~~K~vlv~f~a~wC~-~C~~~~~~~~~~~~~~~~--~~~~~i~v~vd~~~~~--------------------- 74 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCG-PCKRLSKVVFKDSLVADY--FNRHFVNLKMDMEKGE--------------------- 74 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCT-HHHHHHHHGGGCHHHHHH--HHHHSEEEEECSSSTT---------------------
T ss_pred HHHHHHHCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHH--CCCEEEEECCCCCCCC---------------------
T ss_conf 9999986699799999779796-358788887776666542--1010464216677542---------------------
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 889898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 128 PIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 128 ~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
...+++.|++. ..++++++|++|+++..+.+..+++.+.+.|++.|..
T Consensus 75 ---~~~l~~~~~v~------------------~~Pt~~~~~~~G~~v~~~~G~~~~~~l~~~l~~~l~s 122 (130)
T 2kuc_A 75 ---GVELRKKYGVH------------------AYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp ---HHHHHHHTTCC------------------SSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred ---CHHHHHHCCCC------------------CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf ---38899864987------------------5475999989997998884889999999999999875
No 87
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus HB8}
Probab=98.54 E-value=6.3e-07 Score=61.33 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=76.7
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 87079829997967788499679999604777654468888776555430244333058876514333330577777531
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQR 116 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~ 116 (201)
+...+++.+.+.+...-..+|.++|+||.+||+ .|....+.+.++.+++.. ++.++.|.+| +.+
T Consensus 31 p~~~vi~l~~~~f~~~i~~~k~vlV~F~a~WC~-~Ck~~~p~l~~~~~~~~~---~v~~~~id~~---~~~--------- 94 (140)
T 1v98_A 31 PLPWVVEADEKGFAQEVAGAPLTLVDFFAPWCG-PCRLVSPILEELARDHAG---RLKVVKVNVD---EHP--------- 94 (140)
T ss_dssp ------------------CCCEEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TEEEEEEETT---TCH---------
T ss_pred CCCCEEECCHHHHHHHHHCCCCEEEEEECCCCH-HHHHHCCCHHHHHHHHCC---EEEEEEEECC---CCH---------
T ss_conf 998209867899999985699799999899997-688446410488874063---6899999555---568---------
Q ss_pred CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 36864224589889898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 117 FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 117 ~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.+++.|++. ..++++++ .+|+.+..+.+..+.+.+.+.|+++|..
T Consensus 95 ----------------~l~~~~~V~------------------~~Pt~~~~-k~G~~v~~~~G~~~~~~l~~~I~~~L~~ 139 (140)
T 1v98_A 95 ----------------GLAARYGVR------------------SVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp ----------------HHHHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred ----------------HHHHHHCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf ----------------889982977------------------34869999-8999989997999999999999998775
No 88
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.50 E-value=6.9e-07 Score=61.09 Aligned_cols=142 Identities=10% Similarity=0.091 Sum_probs=87.0
Q ss_pred CCCCCCCEEEEC---------CCCCEECHHH-HCCCEEEEEEECC-CCCCCCHH-HHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 666678707982---------9997967788-4996799996047-77654468-8887765554302443330588765
Q gi|254780281|r 32 NRRFNSDVHLVA---------QDGTDFSLSS-LYIKPSIVFFGFT-NCSAVCPT-TLSRLDRLLKQVDPTGTLLNAYFIT 99 (201)
Q Consensus 32 ~~~~~~~f~L~d---------~~G~~~~~~~-~~Gk~~li~F~~T-~Cpd~Cp~-~l~~l~~~~~~l~~~~~~v~~v~Is 99 (201)
-...+|+|+|+. .+.++++++| |+|||++|+|.-- .=| +|+. .++......+.+.+.+. ..++.+|
T Consensus 9 ~~~~ap~f~l~~~~~~~~g~~~~~~~v~l~dlfkgK~VvL~f~PgAFTp-~Ct~e~~p~~~~~~d~~~~~g~-~~i~~is 86 (171)
T 2pwj_A 9 ILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTG-VCSSKHVPPYKHNIDKFKAKGV-DSVICVA 86 (171)
T ss_dssp -CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCT-THHHHTHHHHHHTHHHHHHTTC-SEEEEEE
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHCCCEEEEEEECCCCCC-CCHHHHCHHHHHHHHHHHHCCC-CEEEEEE
T ss_conf 0124998171300123544478740647999859985999992377785-3535668079988999984588-3599994
Q ss_pred ECCCCCCHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE
Q ss_conf 1433333057777753136--86422458988989888860908862256556777752587420699985898299985
Q gi|254780281|r 100 VDPKRDTPEVMKKFVQRFS--DRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI 177 (201)
Q Consensus 100 vDP~rDt~e~l~~y~~~~~--~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~ 177 (201)
+ |++..++.|.+... .++.++... -..+++.+|+........- + ..-.-..|+|| +|.++..+
T Consensus 87 ~----~d~~~~~a~~~~~~~~~~~~~l~D~---~~~~~~~~g~~~~~~~~g~------g-~rs~R~afIId-dG~I~~~~ 151 (171)
T 2pwj_A 87 I----NDPYTVNAWAEKIQAKDAIEFYGDF---DGSFHKSLELTTDLSAGLL------G-IRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp S----SCHHHHHHHHHHTTCTTTSEEEECT---TCHHHHHHTCEEECTTTTC------C-EEECCEEEEEE-TTEEEEEE
T ss_pred C----CCHHHHHHHHHHCCCCCEEEECCCC---CHHHHHHHCCEECCCCCCC------C-CEEEEEEEEEE-CCEEEEEE
T ss_conf 4----9949999887633555235533686---3189986073062442677------7-43689999999-99999999
Q ss_pred C----CC---CCHHHHHHHH
Q ss_conf 7----89---8889999999
Q gi|254780281|r 178 P----YK---DDSDSAIEKI 190 (201)
Q Consensus 178 ~----~~---~~~~~i~~~i 190 (201)
- +. .+++.+++.|
T Consensus 152 ve~~p~~~~vS~ae~vL~~L 171 (171)
T 2pwj_A 152 VEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp ECSSTTCCSSSSHHHHHHHC
T ss_pred EECCCCCCCCCCHHHHHHCC
T ss_conf 98699977336999998539
No 89
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.48 E-value=4.9e-07 Score=61.98 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=71.6
Q ss_pred EECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC
Q ss_conf 98299979677884996799996047776544688887765554302443330588765143333305777775313686
Q gi|254780281|r 41 LVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDR 120 (201)
Q Consensus 41 L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~ 120 (201)
+.+..+....++...+|+++|+||.+||+ .|....+.+.++.+.+.. ++.++.|.+|.. +
T Consensus 36 v~~~~~~~~~~~~~~~Kpvlv~F~a~wC~-~C~~~~p~~~~~~~~~~~---~~~~~~vd~d~~---~------------- 95 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCG-PCKMVAPILEELSKEYAG---KIYIYKVNVDKE---P------------- 95 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCT-THHHHHHHHHHHHHHTTT---TCEEEEEETTTC---H-------------
T ss_pred HHHHHCCCHHHHCCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC---CCEEEEEEECCC---H-------------
T ss_conf 86121162345404997299999889898-899747999998887059---733799950378---8-------------
Q ss_pred EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 42245898898988886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 121 IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 121 ~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
.+++.|++. ..+++++++..|.+.. +.+..+.+++.+-|+++|.++
T Consensus 96 ------------~~~~~~~V~------------------~~Pt~~~~~~g~~~~~-~~G~~~~~~l~~~i~~~l~kq 141 (141)
T 3hxs_A 96 ------------ELARDFGIQ------------------SIPTIWFVPMKGEPQV-NMGALSKEQLKGYIDKVLLKQ 141 (141)
T ss_dssp ------------HHHHHTTCC------------------SSSEEEEECSSSCCEE-EESCCCHHHHHHHHHHTTC--
T ss_pred ------------HHHHHCCCC------------------CCCEEEEEECCCEEEE-EECCCCHHHHHHHHHHHHCCC
T ss_conf ------------789862980------------------0787999979978999-977899999999999987449
No 90
>3fk8_A Disulphide isomerase; APC61824.1, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.30A {Xylella fastidiosa TEMECULA1}
Probab=98.36 E-value=1.5e-06 Score=59.07 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=61.0
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCC
Q ss_conf 79677884996799996047776544688887765554302443330588765143333305777775313686422458
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISG 126 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg 126 (201)
+.+.....+||+++|+||.+||+ .|....+.+......... ..++.++.|.++-..+..
T Consensus 20 ~~l~~a~~~~K~vlv~F~a~WC~-~Ck~~~~~~~~~~~~~~~-~~~~~~v~vd~~~~~~~~------------------- 78 (133)
T 3fk8_A 20 KALAAGKRTHKPTLLVFGANWCT-DCRALDKSLRNQKNTALI-AKHFEVVKIDVGNFDRNL------------------- 78 (133)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCH-HHHHHHHHHTSHHHHHHH-HHHCEEEEEECTTTTSSH-------------------
T ss_pred HHHHHHHHCCCCEEEEEECCCCH-HHCCCCCCCCHHHHHHHH-CCCEEEEEEECCCCCCCH-------------------
T ss_conf 99999998599299999469193-017645232117889985-487499998678762068-------------------
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC-------CCHHHHHHHHHHHH
Q ss_conf 988989888860908862256556777752587420699985898299985789-------88899999999998
Q gi|254780281|r 127 DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK-------DDSDSAIEKINRLI 194 (201)
Q Consensus 127 ~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~-------~~~~~i~~~i~~ll 194 (201)
.+++.|++.- . .-.++++++|++|+++....++ .+++++.+-++++.
T Consensus 79 ------~~~~~~~~~~------~---------~g~Pt~~~~d~~Gk~i~~~~~~~~~~a~~~~~~~i~~~l~~~~ 132 (133)
T 3fk8_A 79 ------ELSQAYGDPI------Q---------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ------HHHHHTTCGG------G---------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHCC------C---------CCCCEEEEECCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHH
T ss_conf ------9999985415------6---------7898799997999897404654301010189999999999974
No 91
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.36 E-value=7.7e-06 Score=54.78 Aligned_cols=142 Identities=17% Similarity=0.183 Sum_probs=85.3
Q ss_pred CCCCCCEEEECCCCC---EECHHH-HCCCEEEEEEECC-CCCCCCHHH-HHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 666787079829997---967788-4996799996047-776544688-8877655543024433305887651433333
Q gi|254780281|r 33 RRFNSDVHLVAQDGT---DFSLSS-LYIKPSIVFFGFT-NCSAVCPTT-LSRLDRLLKQVDPTGTLLNAYFITVDPKRDT 106 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~---~~~~~~-~~Gk~~li~F~~T-~Cpd~Cp~~-l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt 106 (201)
....|+|+|..+.|. .++++| |+||+++|+|.-- .=| .|..+ ++.....++.+.+.+. -.++.+|+ |+
T Consensus 6 Gd~~Pd~tl~~~~~~~~~~vsl~d~f~~K~vvL~f~PgAFTp-~Ct~~~~~~~~~~~~~~~~~g~-~~v~~~s~----~D 79 (241)
T 1nm3_A 6 GKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTP-TCSSSHLPRYNELAPVFKKYGV-DDILVVSV----ND 79 (241)
T ss_dssp TSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCH-HHHHTHHHHHHHHHHHHHHTTC-CEEEEEES----SC
T ss_pred CCCCCCEEEEEECCCCCEEEEHHHHHCCCEEEEEEECCCCCC-CCCCCCCCHHHHHHHHHHHCCC-CEEEEEEC----CC
T ss_conf 878897699977599855853899849983999983688896-5676615547776688885278-61899962----99
Q ss_pred HHHHHHHHHH-CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC-----C
Q ss_conf 0577777531-368642245898898988886090886225655677775258742069998589829998578-----9
Q gi|254780281|r 107 PEVMKKFVQR-FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY-----K 180 (201)
Q Consensus 107 ~e~l~~y~~~-~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~-----~ 180 (201)
+.+++.|.+. ...++.+|..... .+++++|+.+......-. ..-.-..++|| +|.+...+-. +
T Consensus 80 ~~v~~aw~~~~~~~~~~llsD~~~---~~~~~~g~~~~~~~~g~g-------~rs~R~a~iId-dG~I~~~~ve~~~~g~ 148 (241)
T 1nm3_A 80 TFVMNAWKEDEKSENISFIPDGNG---EFTEGMGMLVGKEDLGFG-------KRSWRYSMLVK-NGVVEKMFIEPNEPGD 148 (241)
T ss_dssp HHHHHHHHHHTTCTTSEEEECTTS---HHHHHTTCEEECTTTTCC-------EEECCEEEEEE-TTEEEEEEECCSCSSC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCC---HHHHHCCCEECCCCCCCC-------CCCEEEEEEEE-CCEEEEEEECCCCCCC
T ss_conf 899999999758983666048861---788856876656447686-------42069999999-9999999976689999
Q ss_pred ----CCHHHHHHHHH
Q ss_conf ----88899999999
Q gi|254780281|r 181 ----DDSDSAIEKIN 191 (201)
Q Consensus 181 ----~~~~~i~~~i~ 191 (201)
.+++.+++.|+
T Consensus 149 ~~~~s~~~~~l~~l~ 163 (241)
T 1nm3_A 149 PFKVSDADTMLKYLA 163 (241)
T ss_dssp CCSSSSHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 752246899998641
No 92
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.35 E-value=3.4e-06 Score=56.95 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|.|+.+||+ .|....+.+.++.+++. .++.++.|.+|-. + .+
T Consensus 23 s~kpvlV~F~a~wC~-~C~~~~p~~~~la~~~~---~~v~~~~Vd~d~~---~-------------------------~l 70 (140)
T 3hz4_A 23 SKKPVVVMFYSPACP-YCKAMEPYFEEYAKEYG---SSAVFGRINIATN---P-------------------------WT 70 (140)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHHT---TTSEEEEEETTTC---H-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CCCHHHHHHHHHH---H-------------------------HH
T ss_conf 999099999899998-99988499999877614---7420244431546---9-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|+|.. .++++++ ++|+.+..+.+..+++.+.+.|+.+++.+
T Consensus 71 ~~~~~V~~------------------~PT~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 114 (140)
T 3hz4_A 71 AEKYGVQG------------------TPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQHG 114 (140)
T ss_dssp HHHHTCCE------------------ESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHCCCEE------------------ECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99839947------------------5969999-89999999979999999999999998524
No 93
>3gnj_A Thioredoxin domain protein; APC92103, structural genomics, PSI-2, protein structure initiative; 1.99A {Desulfitobacterium hafniense dcb-2}
Probab=98.33 E-value=3.6e-06 Score=56.80 Aligned_cols=91 Identities=20% Similarity=0.366 Sum_probs=67.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.|++++|+|+.+||+ .|....+.+.++.+.+.. ++.++.|.+|.. + .+
T Consensus 21 ~~~~~lv~F~a~wC~-~C~~~~p~l~~l~~~~~~---~~~~~~vd~d~~---~-------------------------~l 68 (111)
T 3gnj_A 21 EGKACLVMFSRKNCH-VCQKVTPVLEELRLNYEE---SFGFYYVDVEEE---K-------------------------TL 68 (111)
T ss_dssp SCCCEEEEEECSSCH-HHHHHHHHHHHHHHHTTT---TSEEEEEETTTC---H-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC---CEEEEECCCCCC---H-------------------------HH
T ss_conf 899899999989998-999886999999886177---168864355458---8-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++.. .++++++ ++|+.+..+.+..+.+++.+-|+++|++
T Consensus 69 ~~~~~I~~------------------~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 111 (111)
T 3gnj_A 69 FQRFSLKG------------------VPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLED 111 (111)
T ss_dssp HHHTTCCS------------------SCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99719962------------------6879999-7997999997899999999999998667
No 94
>1t00_A Thioredoxin, TRX; structure, redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor A3}
Probab=98.29 E-value=3.3e-06 Score=56.96 Aligned_cols=91 Identities=15% Similarity=0.298 Sum_probs=67.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|-...+.+.++.+++.+ ++.++.|.+|.. ++ +
T Consensus 22 ~~k~vlv~f~a~wC~-~C~~~~p~~~~l~~~~~~---~v~~~~vd~d~~---~~-------------------------~ 69 (112)
T 1t00_A 22 NDKPVLVDFWAAWCG-PCRQIAPSLEAIAAEYGD---KIEIVKLNIDEN---PG-------------------------T 69 (112)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TCEEEEEETTTC---HH-------------------------H
T ss_pred CCCEEEEEEECCCCH-HHHHHCHHHHHHHHHHCC---CEEEEEEECCCC---HH-------------------------H
T ss_conf 899399999889898-889767368999998089---569999966542---77-------------------------7
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++. ..++++++ ++|+....+.+..+.+.+.+.|+++|++
T Consensus 70 ~~~~~v~------------------~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~e 112 (112)
T 1t00_A 70 AAKYGVM------------------SIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIAD 112 (112)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHCC
T ss_pred HHHHCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 8860877------------------89879999-8999989998889999999999998478
No 95
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.29 E-value=1.5e-06 Score=58.99 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=60.2
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHH
Q ss_conf 78849967999960477765446888877655543024433305887651433333057777753136864224589889
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPID 130 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~ 130 (201)
+.+-+||+++|+||.+||| .|-...+.+.+..+... ...++.++.+.++-+. ++
T Consensus 26 l~~~~gK~vlv~F~a~wC~-~Ck~~~~~~~~~~~v~~-~~~~~~~~~v~~~~~~------------------------~~ 79 (134)
T 2fwh_A 26 LVEAKGKPVMLDLYADWCV-ACKEFEKYTFSDPQVQK-ALADTVLLQANVTAND------------------------AQ 79 (134)
T ss_dssp HHHHTTSCEEEEEECTTCH-HHHHHHHHTTTSHHHHH-HTTTSEEEEEECTTCC------------------------HH
T ss_pred HHHCCCCEEEEEEEECCCC-CCCCCCHHHHCCHHHHH-HCCCCEEEEEEEECCC------------------------HH
T ss_conf 9973999499999838781-10036400230599998-5076258887662054------------------------12
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE--ECCCCCHHHHHHHHHH
Q ss_conf 8988886090886225655677775258742069998589829998--5789888999999999
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV--IPYKDDSDSAIEKINR 192 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~--~~~~~~~~~i~~~i~~ 192 (201)
-..+++.|++.. .++++++|++|+.+.. +.+..+++.+.+.|++
T Consensus 80 ~~~l~~~~~v~~------------------~Pt~~~~~~~G~~~~~~r~~G~~~~~~f~~~L~~ 125 (134)
T 2fwh_A 80 DVALLKHLNVLG------------------LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HHHHHHHTTCCS------------------SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HHHHHHHCCCCC------------------CCEEEEECCCCCEEECCEECCCCCHHHHHHHHHH
T ss_conf 466776332577------------------7889999799979624310035899999999987
No 96
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.25 E-value=8.4e-06 Score=54.56 Aligned_cols=93 Identities=12% Similarity=0.192 Sum_probs=63.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|.++++|+.+||+ .|....+.+.++.+++.. .++.++.|.+| +.+ .+
T Consensus 20 ~~k~vvv~F~a~WC~-~Ck~~~p~~~~la~~~~~--~~v~f~~vd~d---~~~-------------------------~l 68 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAE-PCKALKQVFEAISNEPSN--SNVSFLSIDAD---ENS-------------------------EI 68 (112)
T ss_dssp TTCCEEEEEECCC---CHHHHHHHHHHHHHCGGG--TTSEEEEEETT---TCH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHCCCCHHHHHHHHCCC--CCEEEEEEEEC---CCH-------------------------HH
T ss_conf 998799999868796-676578135676443434--65799998512---488-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
++.|++.. .++++++ ++|+.+..+.+ .+++++.+.|+++.+..|
T Consensus 69 ~~~~~I~~------------------vPt~~~~-~~G~~~~~~~G-~~~~~~~~~i~~~~~~~n 112 (112)
T 3d6i_A 69 SELFEISA------------------VPYFIII-HKGTILKELSG-ADPKEYVSLLEDCKNSVN 112 (112)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEECS-CCHHHHHHHHHHHHHHHC
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHHHCCC
T ss_conf 98759864------------------6879999-89989999969-898999999999984549
No 97
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.22 E-value=8.8e-06 Score=54.44 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=63.2
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+|+.+||+ .|....+.+.++.+++. ++.++-|.+| +.+ .
T Consensus 44 ~~~k~vvv~F~a~WC~-~Ck~~~p~~~~la~~~~----~~~~~~vd~d---~~~-------------------------~ 90 (139)
T 3d22_A 44 RDGKIVLANFSARWCG-PSRQIAPYYIELSENYP----SLMFLVIDVD---ELS-------------------------D 90 (139)
T ss_dssp HHTCCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TSH-------------------------H
T ss_pred HCCCEEEEEEECCCCH-HHHHHHHHHHHHHCCCE----EEEEEEEECC---CCH-------------------------H
T ss_conf 2699799999899898-99999998844205540----5899874101---077-------------------------6
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 8886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
+++.|++.. .+++.++ ++|+.+..+.+ .+++++.+.|+.+|..-
T Consensus 91 l~~~~~I~~------------------~PT~i~~-k~G~~v~~~~G-~~~~~l~~~i~~~l~~~ 134 (139)
T 3d22_A 91 FSASWEIKA------------------TPTFFFL-RDGQQVDKLVG-ANKPELHKKITAILDSL 134 (139)
T ss_dssp HHHHTTCCE------------------ESEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHHTS
T ss_pred HHHHCCCCE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHHHCC
T ss_conf 799879960------------------2969999-89999999959-69999999999998137
No 98
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.20 E-value=4.6e-06 Score=56.16 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=65.8
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
...++++|.|+.+||| .|....+.+.++.++.. .++.++.|.+|... .
T Consensus 15 ~~~~~vlV~F~a~WC~-~C~~~~p~~~~l~~~~~---~~v~~~~vd~d~~~----------------------------~ 62 (112)
T 2voc_A 15 TSEGVVLADFWAPWCG-PSKMIAPVLEELDQEMG---DKLKIVKIDVDENQ----------------------------E 62 (112)
T ss_dssp HSSSEEEEEEECTTBG-GGGGHHHHHHHHHHHHT---TTCEEEEEETTTCC----------------------------S
T ss_pred HCCCCEEEEEECCCCH-HHHHHCHHHHHHHHHHC---CEEEEEEEECCCCH----------------------------H
T ss_conf 6799899999889998-89833668988777644---46799999175688----------------------------7
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 8886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
+++.|++.. .+++.++ ++|+.+..+.+..+.+.+.+-|++.|.|-
T Consensus 63 l~~~~~V~~------------------~Pt~i~~-k~G~~v~~~~G~~~~~~l~~~i~~~L~e~ 107 (112)
T 2voc_A 63 TAGKYGVMS------------------IPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp HHHHTTCCS------------------BSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred HHHHCCCCE------------------EEEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHCCHH
T ss_conf 899769833------------------2179999-89989999968999999999999861401
No 99
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.18 E-value=1.1e-05 Score=53.84 Aligned_cols=90 Identities=17% Similarity=0.312 Sum_probs=65.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+..||| .|....+.+.++.+++.. ++.++.|.+| +.++ +
T Consensus 18 ~~~pvlv~F~a~wC~-~C~~~~p~~~~l~~~~~~---~~~~~~vd~d---~~~~-------------------------l 65 (107)
T 1dby_A 18 SSVPVLVDFWAPWCG-PCRIIAPVVDEIAGEYKD---KLKCVKLNTD---ESPN-------------------------V 65 (107)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TCEEEEEETT---TCHH-------------------------H
T ss_pred CCCCEEEEEECCCCC-CCCCCCHHHHHHHHHHCC---CEEEEEEECC---CCHH-------------------------H
T ss_conf 899299999899887-763437389999886248---6149999887---7641-------------------------4
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
++.|++.. .+++.++ ++|+.+..+.+..+.+++.+.|++.|+
T Consensus 66 ~~~~~V~~------------------~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~l~ 107 (107)
T 1dby_A 66 ASEYGIRS------------------IPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp HHHHTCCS------------------SCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHC
T ss_conf 75457063------------------7879999-899898898789999999999998609
No 100
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.18 E-value=1.1e-05 Score=53.82 Aligned_cols=90 Identities=16% Similarity=0.215 Sum_probs=65.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.++++ ++.++.+.+| +.+ .+
T Consensus 15 ~~~~vvV~F~a~wC~-~C~~~~p~~~~~a~~~~----~~~~~~vd~d---~~~-------------------------~l 61 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCA-PCLILAPIIEELAEDYP----QVGFGKLNSD---ENP-------------------------DI 61 (104)
T ss_dssp HSSEEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CHHHHCHHHHHHHHCCC----EEEEEEEECC---CCH-------------------------HH
T ss_conf 399899999889985-24411616555333143----0279999566---698-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++.. .+++.++ ++|+.+..+.+..+.+++.+-|+++|.+
T Consensus 62 ~~~~~V~~------------------~PT~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~e 104 (104)
T 2e0q_A 62 AARYGVMS------------------LPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp HHHTTCCS------------------SCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99819984------------------7789999-9997989997899999999999998684
No 101
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.15 E-value=9.6e-06 Score=54.21 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=73.2
Q ss_pred EEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
Q ss_conf 79829997967788499679999604777654468888776555430244333058876514333330577777531368
Q gi|254780281|r 40 HLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSD 119 (201)
Q Consensus 40 ~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~ 119 (201)
..++.+.+.+..-.-.+++++|+|+.+||+ .|....+.+.++.+++.. ++.++.|.+| +.+
T Consensus 48 ~v~el~~~~f~~~~~~~~pvlV~Fya~wC~-~Ck~~~p~~~~l~~~~~~---~v~~~~Vd~d---~~~------------ 108 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCG-PCRQMAPQFQAAAATLAG---QVRLAKIDTQ---AHP------------ 108 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCH-HHHHHHHHHHHHHHHHTT---TCEEEEEETT---TST------------
T ss_pred CCEECCHHHHHHHHHCCCCEEEEEECCCCH-HHHHHHHHHHHHHHHCCC---CEEEEEEECC---CCH------------
T ss_conf 867549899999970899599999789898-899876999999875168---2699998243---568------------
Q ss_pred CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 6422458988989888860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 120 RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 120 ~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
.+++.|++.. .+++.++ ++|+.+..|.+..+.+++.+-|++.|.
T Consensus 109 -------------~l~~~~~V~~------------------~PTii~f-~~G~~v~~~~G~~~~~~l~~fi~k~lg 152 (155)
T 2ppt_A 109 -------------AVAGRHRIQG------------------IPAFILF-HKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp -------------HHHHHTTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -------------HHHHHHCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf -------------8999720666------------------7879999-899998999799999999999998607
No 102
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.13 E-value=1.8e-05 Score=52.62 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=63.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+++. .++.++.+.+| +.++ +
T Consensus 19 ~~~~vvv~F~a~wC~-~C~~~~~~~~~~~~~~~---~~~~~~~vd~d---~~~~-------------------------l 66 (108)
T 2trx_A 19 ADGAILVDFWAEWCG-PCKMIAPILDEIADEYQ---GKLTVAKLNID---QNPG-------------------------T 66 (108)
T ss_dssp CSSEEEEEEECTTCH-HHHHHHHHHHHHHHHTT---TTEEEEEEETT---TCTT-------------------------H
T ss_pred CCCCEEEEEECCCCH-HHHCCCCHHHHHHHHHC---EEEEEEECCCC---CCHH-------------------------H
T ss_conf 799599999889986-15502834566666532---25677643566---7986-------------------------9
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
++.|++. ..++++++ ++|+.+..+.+..+.+.+.+-|++.|+
T Consensus 67 ~~~~~v~------------------~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~La 108 (108)
T 2trx_A 67 APKYGIR------------------GIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHCCCC------------------EECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 9875981------------------46849999-899798999789999999999999639
No 103
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.12 E-value=2.3e-05 Score=51.95 Aligned_cols=92 Identities=10% Similarity=0.163 Sum_probs=67.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+++++|+|+.+||+ .|....+.+.++.+++. .+++++.|.+|- .++ +
T Consensus 54 ~~~pvlV~F~a~wC~-~Ck~~~p~~~~l~~~~~---~~v~~~~vd~d~---~~~-------------------------l 101 (148)
T 3p2a_A 54 DDLPMVIDFWAPWCG-PCRSFAPIFAETAAERA---GKVRFVKVNTEA---EPA-------------------------L 101 (148)
T ss_dssp CSSCEEEEEECSSCH-HHHHHHHHHHHHHHHTT---TTCEEEEEETTT---CHH-------------------------H
T ss_pred CCCCEEEEEECCCCC-CHHCCCCEEEEHHHHCC---CCEEEEEEECCC---CCC-------------------------H
T ss_conf 799799999899982-22316872131124338---967999984345---631-------------------------2
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|++.. .+.+ ++.++|+.+..+.+..+.+++.+-|++.|++.
T Consensus 102 ~~~~~V~~------------------~PTi-i~fk~G~~v~~~~G~~~~~~l~~~I~~~L~k~ 145 (148)
T 3p2a_A 102 STRFRIRS------------------IPTI-MLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp HHHTTCCS------------------SSEE-EEEETTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred HHHCCCCC------------------CCEE-EEEECCEEEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 66579550------------------8779-99989989899978999999999999986359
No 104
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-fold; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.12 E-value=1.4e-05 Score=53.15 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=63.5
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+||.+||+ .|....+.+.++.+.+.+ +.++.|..| +.++
T Consensus 26 ~~~k~vvv~f~a~wC~-~C~~~~p~~~~l~~~~~~----~~~~~v~~~---~~~~------------------------- 72 (118)
T 2vm1_A 26 DTGKLVIIDFTASWCG-PCRVIAPVFAEYAKKFPG----AIFLKVDVD---ELKD------------------------- 72 (118)
T ss_dssp HHTCCEEEEEECTTCH-HHHHHHHHHHHHHHHCTT----SEEEEEETT---TSHH-------------------------
T ss_pred CCCCEEEEEEECCCCH-HHHHHCHHHHHHHHHCCC----CCEEEEECC---CCHH-------------------------
T ss_conf 1499799999899898-899644466644332354----520365224---5566-------------------------
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 88860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
+++.|++.. .+++.++ ++|+.+..+.+ ..++++.+.|..+|..++
T Consensus 73 ~~~~~~i~~------------------~Pt~v~~-~~G~~v~~~~G-~~~~el~~~i~~~l~~a~ 117 (118)
T 2vm1_A 73 VAEAYNVEA------------------MPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGSAS 117 (118)
T ss_dssp HHHHTTCCS------------------BSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC---
T ss_pred HHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHHCCCC
T ss_conf 665204677------------------8889999-89989999959-799999999999845679
No 105
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron transport, oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.04 E-value=3.1e-05 Score=51.10 Aligned_cols=89 Identities=19% Similarity=0.319 Sum_probs=63.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+++. .++.++-|.+| +.++ +
T Consensus 30 ~~k~vlv~F~a~wC~-~C~~~~p~~~~l~~~~~---~~v~~~~vd~d---~~~~-------------------------l 77 (119)
T 1w4v_A 30 SETPVVVDFHAQWCG-PCKILGPRLEKMVAKQH---GKVVMAKVDID---DHTD-------------------------L 77 (119)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHTT---TSSEEEEEETT---TTHH-------------------------H
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CEEEEEEEECC---CCHH-------------------------H
T ss_conf 999299999899898-89988589999864206---35899999645---6745-------------------------6
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
++.|++.. .++++++ ++|+.+..+.+..+.+.+.+-|+++|
T Consensus 78 ~~~~~V~~------------------~Pti~~~-~~G~~v~~~~G~~~~~~l~~~i~k~l 118 (119)
T 1w4v_A 78 AIEYEVSA------------------VPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 87533765------------------3869999-89989889978999999999999960
No 106
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.04 E-value=4.5e-05 Score=50.13 Aligned_cols=91 Identities=16% Similarity=0.280 Sum_probs=65.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+.+. .++.++.|.+|- .+ .+
T Consensus 24 ~~~~v~v~f~a~wC~-~C~~~~~~~~~~~~~~~---~~~~~~~id~d~---~~-------------------------~l 71 (115)
T 1thx_A 24 AEQPVLVYFWASWCG-PCQLMSPLINLAANTYS---DRLKVVKLEIDP---NP-------------------------TT 71 (115)
T ss_dssp CSSCEEEEEECTTCT-THHHHHHHHHHHHHHTT---TTCEEEEEESTT---CH-------------------------HH
T ss_pred CCCCEEEEEECCCCH-HHHHHCHHHHHHHHHCC---CCEEEEEEECCC---CH-------------------------HH
T ss_conf 899199999899997-88843637667776426---854699998889---98-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++. ..++++++ ++|+.+..+.+..+.+.+.+-|++.|+.
T Consensus 72 ~~~~~V~------------------~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~i~~~l~~ 114 (115)
T 1thx_A 72 VKKYKVE------------------GVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred HHHCCCC------------------EECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 9874982------------------32869999-8999999997889999999999998745
No 107
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma brucei brucei} SCOP: c.47.1.1
Probab=98.03 E-value=2.5e-05 Score=51.68 Aligned_cols=89 Identities=11% Similarity=0.250 Sum_probs=62.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++.++++|+.+||+ .|....+.+.++.++++ ++.++.|.+|- .+ .+
T Consensus 36 ~~~~vvv~F~A~WC~-~Ck~~~p~~~~la~~~~----~v~f~~vd~d~---~~-------------------------~l 82 (125)
T 1r26_A 36 EDILTVAWFTAVWCG-PCKTIERPMEKIAYEFP----TVKFAKVDADN---NS-------------------------EI 82 (125)
T ss_dssp SSSCEEEEEECTTCH-HHHHTHHHHHHHHHHCT----TSEEEEEETTT---CH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC----CCCEECCCCCC---CH-------------------------HH
T ss_conf 898399999899998-99988899999974413----22011156400---88-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++. ..+++.++ .+|+.+..+.+ .+++.+.+.|+++|++
T Consensus 83 ~~~~~I~------------------~~PT~~~~-~~G~~v~~~~G-~~~~~l~~~l~~~i~~ 124 (125)
T 1r26_A 83 VSKCRVL------------------QLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred HHHCCCC------------------CCCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHHHC
T ss_conf 9972981------------------14869999-89989999979-9879999999999960
No 108
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=4.1e-05 Score=50.40 Aligned_cols=94 Identities=11% Similarity=0.053 Sum_probs=65.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 99679999604777654468888776555430244-33305887651433333057777753136864224589889898
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT-GTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~-~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
.+|+++|.|+.+||+ .|....+.+.++.+++.+. ..++.+..|.+| +.+ .
T Consensus 24 ~~~~~lV~Fya~wC~-~C~~~~p~~~~~a~~~~~~~~~~i~~~~vd~~---~~~-------------------------~ 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCG-HCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT---VNQ-------------------------V 74 (133)
T ss_dssp SSSEEEEEEECTTCH-HHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT---TCC-------------------------H
T ss_pred CCCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC---CCH-------------------------H
T ss_conf 899299999889986-21145715777777642043664999996265---598-------------------------9
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++. ..++++++ ++|+....|.+..+++.+.+.+.+.+.+
T Consensus 75 l~~~~~v~------------------~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~~~~~~~~ 118 (133)
T 1x5d_A 75 LASRYGIR------------------GFPTIKIF-QKGESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp HHHHHTCC------------------SSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred HHHHCCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 99985994------------------51869999-8993989997589999999999997652
No 109
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, alternative splicing, FBP interacting repressor, RRM, electron transport; 2.20A {Escherichia coli O157}
Probab=98.02 E-value=2.6e-05 Score=51.56 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=33.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.+++++|+||.+||+ .|....+.+.++.+.+. ..+.++.+.+|
T Consensus 29 ~~~~vvV~F~a~wC~-~Ck~~~p~~~~~a~~~~---~~v~~~~id~d 71 (222)
T 3dxb_A 29 ADGAILVDFWAEWCG-PCKMIAPILDEIADEYQ---GKLTVAKLNID 71 (222)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHTT---TTCEEEEEETT
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CEEEEEEEECC
T ss_conf 899299999899998-89998899998764202---12457887644
No 110
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A 1mdj_A ...
Probab=98.00 E-value=4e-05 Score=50.48 Aligned_cols=89 Identities=21% Similarity=0.255 Sum_probs=59.9
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 84996799996047776544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
+-++|+++++|+.+||+ .|-...+.+.++.+.++ ++.++.|.+| +.++
T Consensus 17 ~~~~k~vvv~f~a~wC~-~C~~~~~~~~~l~~~~~----~~~~~~vd~d---~~~~------------------------ 64 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCG-PCKMIKPFFHSLSEKYS----NVIFLEVDVD---DCQD------------------------ 64 (105)
T ss_dssp HTTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHST----TSEEEEEETT---TCHH------------------------
T ss_pred HCCCCEEEEEEECCCCH-HHHHHCHHHHHHHHHCC----CEEEEECCCC---CCHH------------------------
T ss_conf 57989899999889987-17743432888865303----1004533440---2899------------------------
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 88886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+++.|++. ..+++.++ ++|+.+..+.+ .+++++.+.|+++|
T Consensus 65 -~~~~~~V~------------------~~Pt~~~~-~~G~~v~~~~G-~~~~~l~~~i~~ll 105 (105)
T 3m9j_A 65 -VASESEVK------------------SMPTFQFF-KKGQKVGEFSG-ANKEKLEATINELV 105 (105)
T ss_dssp -HHHHTTCC------------------BSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -HHHHCCCC------------------EEEEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHC
T ss_conf -99987996------------------43379999-99999999969-59999999999559
No 111
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.98 E-value=3.3e-05 Score=50.95 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=61.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++..+. ..++.++.|.+|...+ +
T Consensus 39 s~~~vvV~F~a~WC~-~C~~~~~~~~~~a~~~---~~~v~~~~vd~d~~~~----------------------------l 86 (128)
T 2o8v_B 39 ADGAILVDFWAEWCG-PAKMIAPILDEIADEY---QGKLTVAKLNIDQNPG----------------------------T 86 (128)
T ss_dssp CSSEEEEEEECSSCH-HHHHTHHHHHHHHHHT---TTTEEEEEEETTTCCT----------------------------T
T ss_pred CCCCEEEEEECCCCH-HHHCCCHHHHHHHHHH---CEEEEEEEEEECCCCC----------------------------H
T ss_conf 899399999889896-5654285677777643---1057799998016611----------------------------4
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
++.|++. ..++++++ ++|+.+..+.+..+++++.+-|++.|+
T Consensus 87 ~~~~~v~------------------~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~La 128 (128)
T 2o8v_B 87 APKYGIR------------------GIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp SGGGTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHCCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 8775866------------------69989999-899898999789999999999999639
No 112
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.98 E-value=4.2e-05 Score=50.36 Aligned_cols=92 Identities=14% Similarity=0.231 Sum_probs=62.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|.++|.|+.+||+ .|....+.+.++.++++ ++.++.|.+| +.+ .+
T Consensus 31 ~~klVvV~F~A~wC~-~Ck~~~p~l~~la~~~~----~v~f~~Vd~d---~~~-------------------------~l 77 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAP-QCAQMNEVMAELAKELP----QVSFVKLEAE---GVP-------------------------EV 77 (153)
T ss_dssp TTSCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TSH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHCHHHHHHHHHHC----EEEEEECCCC---CCH-------------------------HH
T ss_conf 989499998799986-36530846999976430----3222103454---488-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851433
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~~ 199 (201)
++.|++.. .+++.++ .+|+.+..+.+ .+++++.+.|++.+..+..
T Consensus 78 ~~~~~V~~------------------~PT~i~f-k~G~~v~r~~G-~~~~~l~~~I~k~~~~~~~ 122 (153)
T 2wz9_A 78 SEKYEISS------------------VPTFLFF-KNSQKIDRLDG-AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHSCTTSS
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHCCCCCC
T ss_conf 99849950------------------0849999-99999999969-7999999999987168888
No 113
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.97 E-value=5.2e-05 Score=49.78 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=62.0
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHH
Q ss_conf 88499679999604777654468888776555430244333058876514333330577777531368642245898898
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDV 131 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i 131 (201)
.+-.+|+++|+|+.+||+ .|....+.+.++.+++. ++.++.|.+| +.+
T Consensus 17 ~~~~~k~vvv~F~a~wC~-~Ck~~~p~~~~la~~~~----~v~f~~vd~d---~~~------------------------ 64 (107)
T 1gh2_A 17 SGAGSRLAVVKFTMRGCG-PCLRIAPAFSSMSNKYP----QAVFLEVDVH---QCQ------------------------ 64 (107)
T ss_dssp HHTTTSCEEEEEECSSCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TSH------------------------
T ss_pred HHCCCCEEEEEEECCCCC-CHHHCCCCHHHHHCCCC----CCCEEEEECC---CCH------------------------
T ss_conf 857998599999899981-20313700111310577----4424899876---799------------------------
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9888860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 132 MRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 132 ~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
.+++.|++.. .++ +++-.+|+.+..+.+ .+++.+.+.|++.|.
T Consensus 65 -~l~~~~~V~~------------------~Pt-~~~~~~G~~v~~~~G-~~~~~l~~~i~~~le 107 (107)
T 1gh2_A 65 -GTAATNNISA------------------TPT-FQFFRNKVRIDQYQG-ADAVGLEEKIKQHLE 107 (107)
T ss_dssp -HHHHHTTCCS------------------SSE-EEEEETTEEEEEEES-SCHHHHHHHHHHHHC
T ss_pred -HHHHHCCCEE------------------ECE-EEEEECCEEEEEEEC-CCHHHHHHHHHHHHC
T ss_conf -9999879907------------------686-999999989999979-399999999999649
No 114
>1xwb_A Thioredoxin; dimerization, redox regulation, X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.96 E-value=6.9e-05 Score=49.02 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=58.6
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHH
Q ss_conf 78849967999960477765446888877655543024433305887651433333057777753136864224589889
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPID 130 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~ 130 (201)
+.+-.||+++|.|+.+||+ .|-...+.+.++.+.+. .++.++.|.+| +.+
T Consensus 15 l~~~~~k~vvv~f~a~wC~-~Ck~~~~~~~~l~~~~~---~~v~~~~vd~~---~~~----------------------- 64 (106)
T 1xwb_A 15 LTKASGKLVVLDFFATWCG-PCKMISPKLVELSTQFA---DNVVVLKVDVD---ECE----------------------- 64 (106)
T ss_dssp HHHHTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHTT---TTEEEEEEETT---TCH-----------------------
T ss_pred HHHCCCCEEEEEEECCCCC-CHHCCCCCHHHHCCCCC---CCEEEEEEECC---CCH-----------------------
T ss_conf 9974899799999889980-10056852466411234---43079999521---188-----------------------
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 8988886090886225655677775258742069998589829998578988899999999
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKIN 191 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~ 191 (201)
.+++.|++.. .++++++ ++|+.+..+.+ .+++++.+-|+
T Consensus 65 --~l~~~~~V~~------------------~Pt~~~~-~~G~~v~~~~G-~~~~~l~~~I~ 103 (106)
T 1xwb_A 65 --DIAMEYNISS------------------MPTFVFL-KNGVKVEEFAG-ANAKRLEDVIK 103 (106)
T ss_dssp --HHHHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHH
T ss_pred --HHHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHH
T ss_conf --9999859820------------------6489999-89989899968-89899999998
No 115
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.95 E-value=5.8e-05 Score=49.49 Aligned_cols=88 Identities=15% Similarity=0.240 Sum_probs=60.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++..+++||.+||| .|....+.+.++.++.+ ..+.+|.+|-..| .+....+
T Consensus 28 ~~~~~~v~f~~~~C~-~C~~~~p~l~~~~~~~~-----~~i~~v~~~~~~~----------------------~~~~~~~ 79 (118)
T 1zma_A 28 KKETATFFIGRKTCP-YCRKFAGTLSGVVAETK-----AHIYFINSEEPSQ----------------------LNDLQAF 79 (118)
T ss_dssp TTCCEEEEEECTTCH-HHHHHHHHHHHHHHHHC-----CCCEEEETTCGGG----------------------HHHHHHH
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHC-----CEEEEEEEECCCC----------------------HHHCCCC
T ss_conf 699699999799796-67611588899999840-----4345666403321----------------------1111244
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
++.|++.. .++++++ .+|+....+.+..++++|.+-
T Consensus 80 ~~~~~i~~------------------vPtl~~~-k~G~~~~~~~g~~s~~~i~~F 115 (118)
T 1zma_A 80 RSRYGIPT------------------VPGFVHI-TDGQINVRCDSSMSAQEIKDF 115 (118)
T ss_dssp HHHHTCCS------------------SCEEEEE-ETTEEEEECCTTCCHHHHHHH
T ss_pred CCCCCCCC------------------CCEEEEE-ECCEEEEEECCCCCHHHHHHH
T ss_conf 52230437------------------8779999-899899988898999999998
No 116
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.95 E-value=4.5e-05 Score=50.16 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=58.4
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHH
Q ss_conf 88499679999604777654468888776555430244333058876514333330577777531368642245898898
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDV 131 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i 131 (201)
..-.||+++|+|+.+||+ .|-...+.+.++.+++.+ +.++.|.+| +.++
T Consensus 30 a~~~~k~vvv~F~a~wC~-~Ck~~~p~~~~l~~~~~~----~~~~~v~~~---~~~~----------------------- 78 (122)
T 2vlu_A 30 ANTAKKLVVIDFTASWCG-PCRIMAPVFADLAKKFPN----AVFLKVDVD---ELKP----------------------- 78 (122)
T ss_dssp HHHTTCCEEEEEECTTCH-HHHHHHHHHHHHHHHCTT----SEEEEEETT---TCHH-----------------------
T ss_pred HHCCCCEEEEEEECCCCC-CHHCCCCCHHHHHHHHHC----CCCEEEECC---CCCC-----------------------
T ss_conf 870899699999899893-320468125788887501----431068710---0511-----------------------
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 132 MRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 132 ~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+++.|++. ..+++.+ -++|+.+..+.+ ..++++.+.|++..
T Consensus 79 --~~~~~~V~------------------~~Pt~~~-~k~G~~v~~~~G-~~~~~l~~~i~~h~ 119 (122)
T 2vlu_A 79 --IAEQFSVE------------------AMPTFLF-MKEGDVKDRVVG-AIKEELTAKVGLHA 119 (122)
T ss_dssp --HHHHTTCC------------------SSSEEEE-EETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred --HHHHCCCC------------------EEEEEEE-EECCEEEEEEEC-CCHHHHHHHHHHHH
T ss_conf --47665961------------------6337999-989989999948-89899999999986
No 117
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Shigella flexneri 2a str} PDB: 2hfd_A
Probab=97.95 E-value=2.9e-05 Score=51.33 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=66.0
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
++++++++|+..||| .|....+.+.++.+++.. ..+ ..+.||.+ .-..+
T Consensus 35 ~~~vVl~~f~a~~C~-~C~~~~pil~ela~~~~~--~~~--~~a~VD~d--------------------------~~~~l 83 (140)
T 2qgv_A 35 PDGVVLLSSDPKRTP-EVSDNPVMIGELLHEFPD--YTW--QVAIADLE--------------------------QSEAI 83 (140)
T ss_dssp SSEEEEECCCTTTCT-TTTHHHHHHHHHHTTCTT--SCC--EEEECCHH--------------------------HHHHH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC--CCE--EEEEECCC--------------------------CCHHH
T ss_conf 883699874089897-699999999999997799--826--99998897--------------------------77999
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|++. ..+++.++ .+|+.+..+.+..+.+++.+.|+.++...
T Consensus 84 a~~~~V~------------------~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~l~~ll~~~ 127 (140)
T 2qgv_A 84 GDRFGAF------------------RFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp HHHHTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred HHHHCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCCH
T ss_conf 9995991------------------17827999-99969687758999999999999986501
No 118
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.95 E-value=4e-05 Score=50.45 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=61.6
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 84996799996047776544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
..+++.++|+|+.+||+ .|....+.+.++.+.+.. ++.++.|.+| +.++
T Consensus 16 ~v~~~~~lv~f~a~wC~-~C~~~~p~~~~~~~~~~~---~~~~~~vd~d---~~~~------------------------ 64 (106)
T 3die_A 16 KVESGVQLVDFWATACG-PCKMIAPVLEELAADYEG---KADILKLDVD---ENPS------------------------ 64 (106)
T ss_dssp HSCSSEEEEEEECSBCH-HHHHHHHHHHHHHHHTTT---TCEEEEEETT---TCHH------------------------
T ss_pred HHHCCCEEEEEECCCCH-HHHCCCHHHHHHHHHHCC---CEEEEEEECC---CCHH------------------------
T ss_conf 98389999999899996-576614578889998546---4357777415---7987------------------------
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
+++.|++. ..++++++ ++|+.+..+.+..+++.+.+-|++
T Consensus 65 -~~~~~~i~------------------~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~i~k 104 (106)
T 3die_A 65 -TAAKYEVM------------------SIPTLIVF-KDGQPVDKVVGFQPKENLAEVLDK 104 (106)
T ss_dssp -HHHHTTCC------------------SBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHT
T ss_pred -HHHHCCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHH
T ss_conf -99860988------------------76869999-899999999788999999999996
No 119
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.94 E-value=4.9e-05 Score=49.92 Aligned_cols=88 Identities=16% Similarity=0.215 Sum_probs=59.2
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+|+.+||+ .|....+.+.++.++++ .+.++.|.+| +.+ .
T Consensus 36 ~~~k~vvV~F~a~wC~-~Ck~~~p~~~~l~~~~~----~~~f~~i~~d---~~~-------------------------~ 82 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCG-PCRFIAPFFADLAKKLP----NVLFLKVDTD---ELK-------------------------S 82 (124)
T ss_dssp HTTCEEEEEEECTTCH-HHHHHHHHHHHHHHHCS----SEEEEEEETT---TSH-------------------------H
T ss_pred HCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CEEEEEEECC---CCH-------------------------H
T ss_conf 2699899999889898-89966556623555278----1689998314---488-------------------------7
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+++.|++.. .+++.++ .+|+.+..+.+ .+++++.+.|++-|
T Consensus 83 l~~~~~V~~------------------~PT~~~~-k~G~~v~~~~G-~~~~~L~~~I~k~L 123 (124)
T 1xfl_A 83 VASDWAIQA------------------MPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHCCCCC------------------CCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHC
T ss_conf 999749987------------------8989999-89999999939-59999999999961
No 120
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.94 E-value=4.3e-05 Score=50.30 Aligned_cols=88 Identities=20% Similarity=0.338 Sum_probs=62.6
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHH
Q ss_conf 96799996047776544688887765554302443330588765143333305777775313686422458988989888
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRVA 135 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l~ 135 (201)
+|+++|+|+.+||+ .|....+.+.++.+++.. ++.+..|.+| +.+ .++
T Consensus 18 ~~pvlv~F~a~wC~-~C~~~~p~~~~~~~~~~~---~~~~~~v~~d---~~~-------------------------~l~ 65 (105)
T 1fb6_A 18 EVPVMVDFWAPWCG-PCKLIAPVIDELAKEYSG---KIAVYKLNTD---EAP-------------------------GIA 65 (105)
T ss_dssp SSCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TCEEEEEETT---TCH-------------------------HHH
T ss_pred CCCEEEEEECCCCC-CCCCCCCHHHHHHHHCCC---CCEEEEEECC---CCH-------------------------HHH
T ss_conf 99499999899884-533567125999985167---6059998433---387-------------------------689
Q ss_pred HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 86090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 136 KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 136 ~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+.|++.. .+++.++ ++|+.+..+.+..+.+.+.+.|++.|
T Consensus 66 ~~~~V~~------------------~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~L 105 (105)
T 1fb6_A 66 TQYNIRS------------------IPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp HHTTCCS------------------SSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred HHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 9769750------------------2379999-89979888878999999999999609
No 121
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.91 E-value=5.9e-05 Score=49.43 Aligned_cols=88 Identities=16% Similarity=0.223 Sum_probs=58.3
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHH
Q ss_conf 88499679999604777654468888776555430244333058876514333330577777531368642245898898
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDV 131 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i 131 (201)
.+-+||+++++|+.+||+ .|....+.+.++.+.++ ++.++.|.+| +.+
T Consensus 15 ~~~~~k~vvv~f~a~wC~-~C~~~~p~l~~l~~~~~----~v~~~~i~~~---~~~------------------------ 62 (104)
T 2vim_A 15 NENKGRLIVVDFFAQWCG-PCRNIAPKVEALAKEIP----EVEFAKVDVD---QNE------------------------ 62 (104)
T ss_dssp HTTTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TCH------------------------
T ss_pred HHCCCCEEEEEEECCCCC-CCCCCCCHHHHHHHHCC----EEEEEEECCC---CCH------------------------
T ss_conf 976999899999889999-87467840123233120----3688871266---599------------------------
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 9888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 132 MRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 132 ~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
.+++.|++. ..+++.++ .+|+.+..+.+ .+++++.+.|++
T Consensus 63 -~~~~~~~V~------------------~~PT~~~~-~~G~~v~~~~G-~~~~~l~~~i~k 102 (104)
T 2vim_A 63 -EAAAKYSVT------------------AMPTFVFI-KDGKEVDRFSG-ANETKLRETITR 102 (104)
T ss_dssp -HHHHHTTCC------------------SSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHH
T ss_pred -HHHHHCCCE------------------EECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf -999987990------------------34679999-89989999969-599999999996
No 122
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis}
Probab=97.91 E-value=1.6e-05 Score=52.93 Aligned_cols=91 Identities=23% Similarity=0.356 Sum_probs=63.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+.+.. ++.++-|..| +.+ .+
T Consensus 29 ~~k~vvv~F~a~wC~-~C~~~~~~~~~~~~~~~~---~~~~~~vd~d---~~~-------------------------~l 76 (121)
T 2i1u_A 29 SNKPVLVDFWATWCG-PCKMVAPVLEEIATERAT---DLTVAKLDVD---TNP-------------------------ET 76 (121)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TCEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCH-HHHHHCCCCCCHHHHCCC---CCEEEEEECC---CCC-------------------------CC
T ss_conf 899699999879897-567537500000121354---5689999677---776-------------------------62
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++.. .++++++ ++|+.+..+.+..+.+++.+.|+++|..
T Consensus 77 ~~~~~V~~------------------~PT~~~~-~~G~~v~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 77 ARNFQVVS------------------IPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred CEECCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 51068315------------------2779999-9998988997899999999999998620
No 123
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.89 E-value=7e-05 Score=49.01 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=58.3
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 84996799996047776544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
+-.+|+++++|+.+||+ .|-...+.+.++.+++. ++.+ +.+|-+.+++
T Consensus 34 ~~~~k~vvv~f~a~wC~-~Ck~~~p~~~~la~~~~----~v~~--~~vd~~~~~~------------------------- 81 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCG-PCKAMAPKYEKLAEEYL----DVIF--LKLDCNQENK------------------------- 81 (124)
T ss_dssp HTTTSCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEE--EEEECSSTTH-------------------------
T ss_pred HCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC----CCEE--EEEECCCCCH-------------------------
T ss_conf 67998699999899998-89988999999975202----2058--9998230086-------------------------
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 8888609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
.+++.|++. ..+++.++ ++|+.+..+.+ .+++++.+.|+..
T Consensus 82 ~l~~~~~V~------------------~~Pt~~~~-k~G~~v~~~~G-~~~~~l~~~i~~~ 122 (124)
T 1faa_A 82 TLAKELGIR------------------VVPTFKIL-KENSVVGEVTG-AKYDKLLEAIQAA 122 (124)
T ss_dssp HHHHHHCCS------------------SSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHHCCCC------------------CCCEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHC
T ss_conf 679877985------------------21849999-99999999949-5989999999972
No 124
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.88 E-value=0.0001 Score=48.04 Aligned_cols=93 Identities=8% Similarity=0.097 Sum_probs=66.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|.++|+|+..||+ .|....+.+.++.+++.. +++++.|.+| +.+ .+
T Consensus 34 ~~k~vlV~Fya~wC~-~C~~~~p~~~~~a~~~~~---~~~~~~vd~~---~~~-------------------------~l 81 (130)
T 2dml_A 34 SDGLWLVEFYAPWCG-HCQRLTPEWKKAATALKD---VVKVGAVNAD---KHQ-------------------------SL 81 (130)
T ss_dssp CSSCEEEEEECTTCS-TTGGGHHHHHHHHHHTTT---TSEEEEEETT---TCH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHCHHHHHHCCCCCC---EEEEEEEECC---CCH-------------------------HH
T ss_conf 899099999899997-888646147774133321---3579999515---573-------------------------14
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|++. +.++++++..++.....|.+..+.+.+++-+.+.+..+
T Consensus 82 ~~~~~I~------------------~~Pti~~f~~~~~~~~~y~G~~~~~~l~~~~~~~l~~~ 126 (130)
T 2dml_A 82 GGQYGVQ------------------GFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSG 126 (130)
T ss_dssp HHHHTCC------------------SSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHHS
T ss_pred HHHCCCC------------------CCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 6554971------------------51869999899858999878999999999999861048
No 125
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.88 E-value=2.8e-05 Score=51.40 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=62.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+.+.. +++++-|.+| +.++ +
T Consensus 16 ~~k~vvv~F~a~wC~-~C~~~~~~~~~~~~~~~~---~v~f~~vd~d---~~~~-------------------------~ 63 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCG-PCRMMAPVLEEFAEAHAD---KVTVAKLNVD---ENPE-------------------------T 63 (105)
T ss_dssp SSSCEEEEEECTTCH-HHHHHHHHHHHHHHHSTT---TCEEEEEETT---TCHH-------------------------H
T ss_pred CCCCEEEEEECCCCC-CHHCCCCCHHHHHHHCCC---CEEEEEEECC---CCHH-------------------------H
T ss_conf 899899999899982-223228407999875489---6699999998---7864-------------------------6
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
++.|++. ..+++.++ ++|+.+..+.+..+.+.+.+.|+++|
T Consensus 64 ~~~~~V~------------------~~Pt~~~f-~~G~~v~~~~G~~~~~~l~~~i~~~L 104 (105)
T 1nsw_A 64 TSQFGIM------------------SIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHHCCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 9867831------------------06389999-89979889978899999999999974
No 126
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} PDB: 2cvk_A
Probab=97.84 E-value=5e-05 Score=49.86 Aligned_cols=90 Identities=21% Similarity=0.310 Sum_probs=63.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
++|+++|+|+.+||+ .|....+.+.++.+++.. ++.++-+..| +.+ .+
T Consensus 17 ~~k~vlv~f~a~wC~-~C~~~~~~~~~~~~~~~~---~~~~~~id~d---~~~-------------------------~~ 64 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCA-PCRMIAPILEEIAKEYEG---KLLVAKLDVD---ENP-------------------------KT 64 (109)
T ss_dssp HCSEEEEEEECTTCH-HHHHHHHHHHHHHHHTBT---TBEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHC---CEEEEEEECC---CHH-------------------------HH
T ss_conf 799899999899997-789899988889998310---5169998351---219-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
++.|++.. .+.++++ ++|+.+..+.+..+.+.+.+.|++.|.
T Consensus 65 ~~~~~v~~------------------~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~l~ 106 (109)
T 2yzu_A 65 AMRYRVMS------------------IPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred HHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 99859883------------------5649999-999998999788999999999998578
No 127
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.83 E-value=0.00012 Score=47.59 Aligned_cols=88 Identities=17% Similarity=0.176 Sum_probs=59.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+.+.+ ++.++.|.+| +.++ +
T Consensus 23 ~~k~vvv~f~a~wC~-~C~~~~p~~~~la~~~~~---~v~~~~vd~~---~~~~-------------------------l 70 (112)
T 1ep7_A 23 EHKPIVVDFTATWCG-PCKMIAPLFETLSNDYAG---KVIFLKVDVD---AVAA-------------------------V 70 (112)
T ss_dssp HTCCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TSEEEEEETT---TTHH-------------------------H
T ss_pred CCCEEEEEEECCCCC-CHHCCCCEEEEECCCCCC---EEEEEEEECH---HHHH-------------------------H
T ss_conf 599199999889984-233448483200146771---7999996123---3189-------------------------9
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
++.|++.. .++++++ ++|+.+..+.+ .+++++.+-|++..
T Consensus 71 ~~~~~v~~------------------~Pt~~~~-~~G~~v~~~~G-~~~~~l~~~i~k~~ 110 (112)
T 1ep7_A 71 AEAAGITA------------------MPTFHVY-KDGVKADDLVG-ASQDKLKALVAKHA 110 (112)
T ss_dssp HHHHTCCB------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred HHHCCCCE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHH
T ss_conf 99939923------------------0769999-89999999959-69999999999863
No 128
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.82 E-value=4.8e-05 Score=50.00 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=64.8
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
++| .++|+||.+||| .|-...+.+.++.+++.... +.+.....+- ..+.++...
T Consensus 30 l~~-~~iV~f~a~wC~-~C~~~~P~l~~la~e~~~~~--~~~~~~~~~~----------------------~~d~~~~~~ 83 (135)
T 3emx_A 30 LQG-DAILAVYSKTCP-HCHRDWPQLIQASKEVDVPI--VMFIWGSLIG----------------------ERELSAARL 83 (135)
T ss_dssp HTS-SEEEEEEETTCH-HHHHHHHHHHHHHTTCCSCE--EEEEECTTCC----------------------HHHHHHHHH
T ss_pred HCC-CEEEEEECCCCC-CHHHHHHHHHHHHHHHCCCC--CCCCCCEEEE----------------------EECCHHHHH
T ss_conf 679-989999899996-76778189999999837542--2224632676----------------------640346789
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++.. .+++.++ .+|+.+..+.+..+.+.+.+.+++++..
T Consensus 84 ~~~~~~I~~------------------~PTli~~-k~Gk~v~r~~G~~p~~~~~e~~~~i~~~ 127 (135)
T 3emx_A 84 EMNKAGVEG------------------TPTLVFY-KEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 998537346------------------6869999-8998988998899668999999998778
No 129
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.81 E-value=3.8e-05 Score=50.57 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=56.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHH----------HHHCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEC
Q ss_conf 99679999604777654468888776555----------43024-43330588765143333305777775313686422
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLL----------KQVDP-TGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIG 123 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~----------~~l~~-~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ 123 (201)
.+|+++|+||.+||+ .|..+++.+..+. ..+.+ .+.++.+..|.+|.. +
T Consensus 20 ~~k~vvv~F~A~WC~-~C~~~~~~~~~~~~~ck~~~~~~~~~~~~~~~~~~~~~v~~d~~---~---------------- 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCG-PIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---P---------------- 79 (123)
T ss_dssp CSSEEEEEEECSSCS-CBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC---T----------------
T ss_pred CCCEEEEEEECCCCH-HHHHHCHHHHHHCCCCEEECCHHHHHHHHHHHCEEEEEEECCCC---C----------------
T ss_conf 798399999889984-68886666665165501116176766665421147999842567---2----------------
Q ss_pred CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 458988989888860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 124 ISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 124 ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
.+++.|+| ...++++++ ++|+++..+.+..+++++.+-|++.|+
T Consensus 80 ---------~l~~~~~V------------------~~~PT~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~La 123 (123)
T 1oaz_A 80 ---------GTAPKYGI------------------RGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp ---------TTGGGGTC------------------CBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred ---------CCHHHEEE------------------EECEEEEEE-ECCCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf ---------30566345------------------434389999-899397888789999999999998729
No 130
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.81 E-value=9.4e-05 Score=48.21 Aligned_cols=94 Identities=10% Similarity=0.166 Sum_probs=65.9
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-+++.++|.|+.+||+ .|....+.+.++.+.+.+.+..+.+.-|.+|- .+ .
T Consensus 32 ~~~~~vlV~Fya~wC~-~C~~~~p~~~~l~~~~~~~~~~i~~~~vd~~~---~~-------------------------~ 82 (140)
T 2dj1_A 32 ADKDTVLLEFYAPWCG-HCKQFAPEYEKIASTLKDNDPPIAVAKIDATS---AS-------------------------M 82 (140)
T ss_dssp TTCSEEEEEECCTTCH-HHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT---CH-------------------------H
T ss_pred HCCCCEEEEEECCCCC-CHHHHCCHHHHHHHHHCCCCCCEEEEEECCHH---HH-------------------------H
T ss_conf 6699799999888880-22765750121111202346624578503135---47-------------------------7
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++. ..++++++ ++|+.+. |.+..+.+.+.+-|++++..
T Consensus 83 l~~~~~I~------------------~~PT~~~~-~~g~~~~-~~g~~~~~~l~~~i~~~~~~ 125 (140)
T 2dj1_A 83 LASKFDVS------------------GYPTIKIL-KKGQAVD-YDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp HHHHTTCC------------------SSSEEEEE-ETTEEEE-CCSCCCHHHHHHHHHHHHSS
T ss_pred HHHHCCCC------------------CCCEEEEE-ECCEEEE-EECCCCHHHHHHHHHHHHCC
T ss_conf 78863985------------------42869999-8999999-76489999999999997578
No 131
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.79 E-value=1.9e-05 Score=52.35 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=61.1
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCC
Q ss_conf 79677884996799996047776544688887765554302443330588765143333305777775313686422458
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISG 126 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg 126 (201)
+.+....-.||+++|.|+.+||+ .|-...+.+.+..+... . +.++++|.+|-+.. ..+.+|...
T Consensus 37 eal~~Ak~~~Kpvlv~F~a~WC~-~Ck~~~~~~~~~~~v~~-~--~~~fv~v~vD~~~~--~~~~~~~~~---------- 100 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCG-ACKALKPKFAESTEISE-L--SHNFVMVNLEDEEE--PKDEDFSPD---------- 100 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCH-HHHHHHHHHHTCHHHHH-H--HTTSEEEEEEGGGS--CSCGGGCTT----------
T ss_pred HHHHHHHHCCCCEEEEECCCCCC-CCCCCHHHCCCCHHHHH-H--HCCEEEECCCCCCC--HHHHHHHHC----------
T ss_conf 99999998199799998889882-71257301344499996-2--08889821777747--589998742----------
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC----------CCCHHHHHHHHHHHHH
Q ss_conf 98898988886090886225655677775258742069998589829998578----------9888999999999985
Q gi|254780281|r 127 DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY----------KDDSDSAIEKINRLIT 195 (201)
Q Consensus 127 ~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~----------~~~~~~i~~~i~~ll~ 195 (201)
. .+ .++++++||+|+.+..+.+ ..+.+.+++.+++.+.
T Consensus 101 -------------~--------------~~----~Pt~~fld~~G~~~~~~~G~~~~~~~~~~~~~~~~~~~~~k~~~e 148 (164)
T 1sen_A 101 -------------G--------------GY----IPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp -------------C--------------SC----SSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred -------------C--------------CC----CEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf -------------6--------------76----428999847991866742788886411367799999999999999
No 132
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.75 E-value=0.00017 Score=46.63 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=58.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+++. ++.++-|.+| .+.+ .+
T Consensus 23 ~~k~vvV~f~a~wC~-~C~~~~p~~~~la~~~~----~~~~~~vd~~--~~~~-------------------------~l 70 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCG-PSKAMAPKYEKLAEEYL----DVIFLKLDCN--QENK-------------------------TL 70 (111)
T ss_dssp TTSCEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEECS--STTH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CCCEEEEECC--CCCH-------------------------HH
T ss_conf 998799999899998-89966689866533135----5441789974--1168-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
++.|++. ..+++.++ ++|+.+..+.+ .+++++.+.|++.
T Consensus 71 ~~~~~V~------------------~~Pt~~~~-~~G~~v~~~~G-~~~~~l~~~i~~~ 109 (111)
T 2pu9_C 71 AKELGIR------------------VVPTFKIL-KENSVVGEVTG-AKYDKLLEAIQAA 109 (111)
T ss_dssp HHHHCCS------------------BSSEEEEE-SSSSEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHCCCC------------------EECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHC
T ss_conf 9996993------------------13859999-89999999959-4989999999970
No 133
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.71 E-value=0.00018 Score=46.53 Aligned_cols=87 Identities=16% Similarity=0.254 Sum_probs=56.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|....+.+.++.+++.. ..+.++.+.+| +.+ .+
T Consensus 32 ~~k~vvV~F~a~wC~-~C~~~~p~~~~l~~~~~~--~~~~~~~vd~~---~~~-------------------------~l 80 (121)
T 2j23_A 32 GDKVVVIDFWATWCG-PCKMIGPVFEKISDTPAG--DKVGFYKVDVD---EQS-------------------------QI 80 (121)
T ss_dssp SSSCEEEEEECTTCS-THHHHHHHHHHHHTSTHH--HHSEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CCCCCCCCCHHHHHHCCC--CCEEEEEEECC---CCH-------------------------HH
T ss_conf 999799999899998-865788640444332147--75058998854---398-------------------------89
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
++.|++.. .+++.++ ++|+.+..+.+ .+++++.+.|++
T Consensus 81 ~~~~~I~~------------------~Pt~~~~-~~G~~v~r~~G-~~~~~l~~~I~k 118 (121)
T 2j23_A 81 AQEVGIRA------------------MPTFVFF-KNGQKIDTVVG-ADPSKLQAAITQ 118 (121)
T ss_dssp HHHHTCCS------------------SSEEEEE-ETTEEEEEEES-SCHHHHHHHHHH
T ss_pred HHHCCCEE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf 98729804------------------3649999-89999999969-799999999997
No 134
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.69 E-value=0.00029 Score=45.23 Aligned_cols=87 Identities=13% Similarity=0.154 Sum_probs=59.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+++++|.|+.+||+ .|-...+.+.++.+.+.. ++.++.|.+|- .+ .+
T Consensus 19 ~~~~vvV~F~a~wC~-~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~---~~-------------------------~l 66 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCG-PCKMIGPALGEIGKEFAG---KVTVAKVNIDD---NP-------------------------ET 66 (107)
T ss_dssp CSSEEEEEEECTTCH-HHHHHHHHHHHHHHHHTT---SEEEEEEETTT---CC-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CCCCCCHHHHHHHHHHCC---CEEEEEEECCC---CH-------------------------HH
T ss_conf 899799999899882-200233225788886075---14799995545---27-------------------------68
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
++.|++.. .++++++ .+|+.+..+.+..+.+++.+-|++
T Consensus 67 ~~~~~V~~------------------~PT~~~~-~~G~~v~~~~G~~~~~~l~~~ie~ 105 (107)
T 2i4a_A 67 PNAYQVRS------------------IPTLMLV-RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred HHCCCEEE------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHH
T ss_conf 73562167------------------0689999-999998999789999999999996
No 135
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.68 E-value=0.00023 Score=45.85 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=58.2
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHH
Q ss_conf 88499679999604777654468888776555430244333058876514333330577777531368642245898898
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDV 131 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i 131 (201)
.+-++|+++++|+.+||+ .|....+.+.++.+++ ++.++.|.+| ..+
T Consensus 29 ~~~~~~~vvv~F~a~wC~-~C~~~~~~~~~l~~~~-----~~~~~~vd~d---~~~------------------------ 75 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCG-PCKTIAPLFKELSEKY-----DAIFVKVDVD---KLE------------------------ 75 (117)
T ss_dssp HHTTTSCEEEEEECTTCH-HHHHHHHHHHHHHTTS-----SSEEEEEETT---TSH------------------------
T ss_pred HHCCCCEEEEEEECCCCC-CCCCCCHHHHHHHCCC-----CCCCEEEEEE---CCH------------------------
T ss_conf 967989899999769999-7336760366632324-----5650677651---489------------------------
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 988886090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 132 MRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 132 ~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
.+++.|++.. .+++.++ ++|+.+..+.+ .+++.+.+.|+++|
T Consensus 76 -~l~~~~~V~~------------------~Pt~~~~-~~G~~v~~~~G-~~~~~l~~~i~~~l 117 (117)
T 2xc2_A 76 -ETARKYNISA------------------MPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp -HHHHHTTCCS------------------SSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -HHHHHCCCEE------------------EEEEEEE-ECCEEEEEEEC-CCHHHHHHHHHHHC
T ss_conf -9999879928------------------7669999-99999999959-89899999999769
No 136
>2diz_A Thioredoxin domain-containing protein 5; thioredoxin-like protein P46, endoplasmic reticulum protein ERP46, TLP46, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=8e-05 Score=48.65 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=63.3
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
...+.++|.|+.+||+ .|....+.+.++.+++......+++.-|..|-. + .
T Consensus 21 i~~~~~lV~F~a~wC~-~C~~~~p~~~~la~~~~~~~~~v~~~~vd~~~~---~-------------------------~ 71 (117)
T 2diz_A 21 IAEGITFIKFYAPWCG-HCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE---R-------------------------N 71 (117)
T ss_dssp HHSSBEEEEEECTTCS-HHHHHHHHHHHHHHCCCTTSCCCEEEEEETTTS---H-------------------------H
T ss_pred HCCCCEEEEEECCCCH-HHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCC---H-------------------------H
T ss_conf 8189899999899996-676518312110022315650699975026636---8-------------------------8
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
+++.|++. ..++++++ ++|+.+..|.+..+.+.+.+-|++-+.
T Consensus 72 l~~~~~i~------------------~~PT~~~~-~~G~~~~~~~G~~~~~~l~~fi~~~~~ 114 (117)
T 2diz_A 72 ICSKYSVR------------------GYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLSQAK 114 (117)
T ss_dssp HHHHTTCC------------------SSSEEECB-BSSSBCCCCCSCCSHHHHHHHHHHHHC
T ss_pred HHHHCCCE------------------EECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99985992------------------63969999-899999999678999999999997503
No 137
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.66 E-value=0.00036 Score=44.67 Aligned_cols=103 Identities=12% Similarity=0.099 Sum_probs=67.1
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHH---HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEC
Q ss_conf 796778849967999960477765446888877---65554302443330588765143333305777775313686422
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRL---DRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIG 123 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l---~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ 123 (201)
+.+....-.|||++|+|..+||+ .|...-... ..+.+.+.+ + +|++.+| .|++|. +
T Consensus 33 ~A~~~Ak~~~K~llV~~~~~~c~-~C~~m~~~vf~~~~V~~~l~~---~--fV~~~vd--~~~~eg-~------------ 91 (153)
T 2dlx_A 33 TAKECGQMQNKWLMINIQNVQDF-ACQCLNRDVWSNEAVKNIIRE---H--FIFWQVY--HDSEEG-Q------------ 91 (153)
T ss_dssp HHHHHHHHHTCEEEEEEECSCTT-THHHHHHHTTTCHHHHHHHHH---T--EEEEEEE--SSSHHH-H------------
T ss_pred HHHHHHHHHCCEEEEEEECCCCH-HHHHHHHHHCCCHHHHHHHHH---H--EEEEEEC--CCCCCH-H------------
T ss_conf 99999997199699997358763-389999884258889999864---2--6899603--788001-9------------
Q ss_pred CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 4589889898888609088622565567777525874206999858-98299985789888999999999985143
Q gi|254780281|r 124 ISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDT-AGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 124 ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~-~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
.+++.|++. ..+.++++|| .|+.++.++ ..++++.++.|++.|.+..
T Consensus 92 ---------~~~~~y~v~------------------~~P~i~~idP~tGe~i~~~~-~~~~~~fl~~L~~fl~~~~ 139 (153)
T 2dlx_A 92 ---------RYIQFYKLG------------------DFPYVSILDPRTGQKLVEWH-QLDVSSFLDQVTGFLGEHG 139 (153)
T ss_dssp ---------HHHHHHTCC------------------SSSEEEEECTTTCCCCEEES-SCCHHHHHHHHHHHHHHTC
T ss_pred ---------HHHHHCCCC------------------CCCEEEEEECCCCCEEEEEC-CCCHHHHHHHHHHHHHHCC
T ss_conf ---------999836768------------------99879999489994877756-7899999999999985069
No 138
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.66 E-value=0.00081 Score=42.57 Aligned_cols=128 Identities=12% Similarity=0.105 Sum_probs=80.1
Q ss_pred CEECHHH-HCCCEEEEEEECC-CCCCCCHH-HHHHHHHHHHHH-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC-CE
Q ss_conf 7967788-4996799996047-77654468-888776555430-244333058876514333330577777531368-64
Q gi|254780281|r 47 TDFSLSS-LYIKPSIVFFGFT-NCSAVCPT-TLSRLDRLLKQV-DPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSD-RI 121 (201)
Q Consensus 47 ~~~~~~~-~~Gk~~li~F~~T-~Cpd~Cp~-~l~~l~~~~~~l-~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~-~~ 121 (201)
++++..+ |+||.+++++.-- .-| .|.. .++...+-++++ .+.| --+++.||+ |+|-++++|.+.... +.
T Consensus 33 ~~~~~~d~f~~KkVvl~~vPGAFTp-tCs~~hlP~y~~~~~~f~k~~g-vd~I~cisv----NDpfVm~AW~~~~~~~~i 106 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTP-TCSTKMIPGYEEEYDYFIKENN-FDDIYCITN----NDIYVLKSWFKSMDIKKI 106 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCH-HHHHTHHHHHHHTHHHHHTTSC-CSEEEEEES----SCHHHHHHHHHHTTCCSS
T ss_pred EEEEHHHHHCCCEEEEEECCCCCCC-CCCHHHCCCHHHHHHHHHHHCC-CCEEEEEEC----CCHHHHHHHHHHCCCCCC
T ss_conf 5745999859984999973777698-6783037568888899998569-852689965----999999999974663436
Q ss_pred ECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC-------------CCCHHHHHH
Q ss_conf 2245898898988886090886225655677775258742069998589829998578-------------988899999
Q gi|254780281|r 122 IGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY-------------KDDSDSAIE 188 (201)
Q Consensus 122 ~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~-------------~~~~~~i~~ 188 (201)
.+|... -..+++++|+.+......-. ..-.-..++|| +|.+...+-- ..+++.|++
T Consensus 107 ~~lsD~---~g~ftk~lGl~~d~~~~g~g-------~Rs~Rya~iid-dg~I~~~~vE~~~~~~~~~dp~~vSsae~iL~ 175 (182)
T 1xiy_A 107 KYISDG---NSSFTDSMNMLVDKSNFFMG-------MRPWRFVAIVE-NNILVKMFQEKDKQHNIQTDPYDISTVNNVKE 175 (182)
T ss_dssp EEEECT---TSHHHHHTTCEEECGGGTCC-------EEECCEEEEEE-TTEEEEEEECSSCCTTCSSCCCSTTSHHHHHH
T ss_pred EEEECC---CHHHHHHCCCEECCCCCCCE-------EEEEEEEEEEE-CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 681178---78999864981435668880-------87777999998-99899999837987788898756679999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780281|r 189 KIN 191 (201)
Q Consensus 189 ~i~ 191 (201)
.|+
T Consensus 176 ~Lk 178 (182)
T 1xiy_A 176 FLK 178 (182)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 885
No 139
>3cxg_A Putative thioredoxin; malaria, structural genomics, oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum 3D7}
Probab=97.65 E-value=0.00017 Score=46.72 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=30.1
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE
Q ss_conf 78849967999960477765446888877655543024433305887651
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV 100 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv 100 (201)
+++.++|+++|+|+.+||+ +|....+.+.++.+. .++.++.|.+
T Consensus 35 ~~~~~~k~VvV~F~A~WC~-pCk~~~p~~~~l~~~-----~~v~f~~Vd~ 78 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCK-PCNKIKEYFKNQLNY-----YYVTLVDIDV 78 (133)
T ss_dssp HTC-CCSEEEEEEECTTCH-HHHHTHHHHHGGGGT-----EECEEEEEET
T ss_pred HHHCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHH-----CCCCCEEEEC
T ss_conf 9856999599999669772-303201778998762-----0244326330
No 140
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.63 E-value=0.00021 Score=46.13 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=55.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+++++|.|+.+||+ .|-...+.+.++.+.. .++.++.|.+| +.+ .+
T Consensus 22 ~~~~vvv~F~A~WC~-~Ck~~~p~~~~la~~~----~~v~~~~vd~d---~~~-------------------------~l 68 (118)
T 2f51_A 22 APGLVLVDFFATWCG-PCQRLGQILPSIAEAN----KDVTFIKVDVD---KNG-------------------------NA 68 (118)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHC----TTSEEEEEETT---TCH-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHCCC----CEEEEEEEECC---CCH-------------------------HH
T ss_conf 899199999889898-9998569999753203----40205898766---799-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC--CCCCHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857--89888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP--YKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~--~~~~~~~i~~~i~~ 192 (201)
++.|++. ..+++++++.+|+...... .+.+++++.+.|++
T Consensus 69 ~~~~~V~------------------~~PT~~~~~~~g~~~~~~~~~~ga~~~~l~~~i~k 110 (118)
T 2f51_A 69 ADAYGVS------------------SIPALFFVKKEGNEIKTLDQFVGADVSRIKADIEK 110 (118)
T ss_dssp HHHTTCC------------------SSSEEEEEEEETTEEEEEEEEESCCHHHHHHHHHH
T ss_pred HHHCCCE------------------EECEEEEEECCCEEEEEEEEEECCCHHHHHHHHHH
T ss_conf 9984990------------------52879999899989999847837999999999997
No 141
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.63 E-value=0.00029 Score=45.23 Aligned_cols=87 Identities=17% Similarity=0.225 Sum_probs=56.3
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
-.||+++|+|+.+||+ .|....+.+.++.+.++ ++.++.+.+| +.+ .
T Consensus 24 ~~~k~vvv~F~a~wC~-~C~~~~p~~~~l~~~~~----~v~~~~vd~~---~~~-------------------------~ 70 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCP-PCKMIAPIFAELAKKFP----NVTFLKVDVD---ELK-------------------------A 70 (113)
T ss_dssp TSSSEEEEEEECSSCH-HHHHHHHHHHHHHHHCS----SEEEEEEETT---TCH-------------------------H
T ss_pred CCCCEEEEEEECCCCH-HHHHHCCHHHHHHHHCC----CCEEEEECCC---CCH-------------------------H
T ss_conf 3899499999899997-88823752223444169----8148860333---487-------------------------7
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 888609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
+++.|++.. .+++.++ ++|+.+..+.+ .+++.+.+.|++.
T Consensus 71 l~~~~~I~~------------------~PT~~~~-~~G~~~~~~~G-~~~~~l~~~i~k~ 110 (113)
T 1ti3_A 71 VAEEWNVEA------------------MPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp HHHHHHCSS------------------TTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred HHHHHCCEE------------------CCEEEEE-ECCEEEEEECC-CCHHHHHHHHHHH
T ss_conf 898709716------------------1789999-99999999869-8999999999987
No 142
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.63 E-value=0.0001 Score=48.03 Aligned_cols=84 Identities=15% Similarity=0.338 Sum_probs=56.1
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHH
Q ss_conf 96799996047776544688887765554302443330588765143333305777775313686422458988989888
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRVA 135 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l~ 135 (201)
.|+.+++|+.+||| .|....+.+.++.+.+.+ .+.+..+.+|-. ++ ++
T Consensus 2 ~kv~v~~F~a~wC~-~C~~~~p~~~~l~~~~~~---~~~~~~~~~~~~---~~-------------------------l~ 49 (85)
T 1fo5_A 2 SKVKIELFTSPMCP-HCPAAKRVVEEVANEMPD---AVEVEYINVMEN---PQ-------------------------KA 49 (85)
T ss_dssp CCEEEEEEECCCSS-CCCTHHHHHHHHHHHCSS---SEEEEEEESSSS---CC-------------------------TT
T ss_pred CCCEEEEEECCCCH-HHHHHHHHHHHHHHHCCE---EEEEEEEECCCC---HH-------------------------HH
T ss_conf 96399999999886-269889887554220210---256777505458---99-------------------------99
Q ss_pred HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 86090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 136 KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 136 ~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
+.|++. ..++ ++++.+|++. +..+.+++.+.|++.|
T Consensus 50 ~~~~V~------------------~~PT-~~i~~~g~~~----G~~~~~~l~~~i~~~L 85 (85)
T 1fo5_A 50 MEYGIM------------------AVPT-IVINGDVEFI----GAPTKEALVEAIKKRL 85 (85)
T ss_dssp TSTTTC------------------CSSE-EEETTEEECC----SSSSSHHHHHHHHHHC
T ss_pred HHCCCE------------------EECE-EEEECCCEEE----CCCCHHHHHHHHHHCC
T ss_conf 981982------------------7488-9998695998----7999999999999539
No 143
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A
Probab=97.56 E-value=0.00041 Score=44.37 Aligned_cols=84 Identities=23% Similarity=0.282 Sum_probs=54.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|+|+.+||+ .|-...+.+.++.+.. .++.++.|..| +.+ .+
T Consensus 23 ~~k~vvv~F~a~wC~-~C~~~~~~l~~~a~~~----~~v~~~~vd~d---~~~-------------------------~l 69 (109)
T 3f3q_A 23 QDKLVVVDFYATWCG-PCKMIAPMIEKFSEQY----PQADFYKLDVD---ELG-------------------------DV 69 (109)
T ss_dssp SSSCEEEEEECTTCH-HHHHHHHHHHHHHHHC----TTSEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CCCCCCCCHHHHHHCC----CCCCEEEEECC---CCH-------------------------HH
T ss_conf 999599999899980-6036873014442025----66314687236---599-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKIN 191 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~ 191 (201)
++.|++.. .+++.++ ++|+.+..+.+ .+++++.+.|+
T Consensus 70 ~~~~~V~~------------------~Pt~i~~-~~G~~v~~~~G-~~~~~l~~~I~ 106 (109)
T 3f3q_A 70 AQKNEVSA------------------MPTLLLF-KNGKEVAKVVG-ANPAAIKQAIA 106 (109)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEES-SCHHHHHHHHH
T ss_pred HHHCCCCE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHH
T ss_conf 99859916------------------3879999-89989999979-99999999998
No 144
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxin; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium LT2} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.55 E-value=0.00012 Score=47.51 Aligned_cols=92 Identities=10% Similarity=0.082 Sum_probs=65.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
..++++++|+..||| .|....+.+.++.+++. +.++.++.|.+| .-..+
T Consensus 35 ~~~vV~~~~~a~~c~-~C~~~~p~l~eLa~~~~--~~~~~~a~VD~d----------------------------~~~~l 83 (142)
T 2es7_A 35 GDGVILLSSDPRRTP-EVSDNPVMIAELLREFP--QFDWQVAVADLE----------------------------QSEAI 83 (142)
T ss_dssp CSEEEEECCCSCC-----CCHHHHHHHHHHTCT--TSCCEEEEECHH----------------------------HHHHH
T ss_pred CCEEEEEEECCCCCH-HHHHHHHHHHHHHHHCC--CCCEEEEEECCC----------------------------CCHHH
T ss_conf 983899980288891-08889989999998789--994899998288----------------------------89899
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++.|++.. .++++++ ++|+.++.+.+..+.+++.+.|+++++.
T Consensus 84 a~~~~V~~------------------~PT~i~f-~~G~~v~~~~G~~~~~~l~~~I~~ll~~ 126 (142)
T 2es7_A 84 GDRFNVRR------------------FPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp HHTTTCCS------------------SSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred HHHHCCCC------------------CCEEEEE-ECCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 99809805------------------7559999-9998964664989999999999998647
No 145
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.43 E-value=0.00045 Score=44.12 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=56.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++++++.|+.+||+ .|....+.+.++.+.. .++.++-|.+| +.+ .+
T Consensus 29 ~~~~vvv~F~a~wC~-~Ck~~~p~~~~~~~~~----~~v~f~~vd~d---~~~-------------------------~l 75 (114)
T 2oe3_A 29 QNDKLVIDFYATWCG-PCKMMQPHLTKLIQAY----PDVRFVKCDVD---ESP-------------------------DI 75 (114)
T ss_dssp HCSEEEEEEECTTCH-HHHHTHHHHHHHHHHC----TTSEEEEEETT---TCH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CCCCCCCCCHHCCCCC----EEEEEEEEEEC---CCH-------------------------HH
T ss_conf 799899999889986-6003476510013421----16999999722---435-------------------------44
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
++.|++.. .++ +++-++|+.+..+.+ .+++++.+.|++|
T Consensus 76 ~~~~~I~~------------------~Pt-~~~fk~Gk~v~~~~G-~~~~~L~~~ikeL 114 (114)
T 2oe3_A 76 AKECEVTA------------------MPT-FVLGKDGQLIGKIIG-ANPTALEKGIKDL 114 (114)
T ss_dssp HHHTTCCS------------------BSE-EEEEETTEEEEEEES-SCHHHHHHHHHTC
T ss_pred HHHCCCEE------------------EEE-EEEEECCEEEEEEEC-CCHHHHHHHHHCC
T ss_conf 54135347------------------318-999989999999969-8989999999719
No 146
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.42 E-value=0.001 Score=42.02 Aligned_cols=90 Identities=13% Similarity=0.100 Sum_probs=56.7
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
++|. ++|.|+.+||+ .|....+.+.++.+.+. +.++.+..|.+|- .+ .
T Consensus 21 ~~~~-~lV~Fya~wC~-~C~~~~p~~~~la~~~~--~~~i~~~~vd~~~---~~-------------------------~ 68 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCP-ACQNLQPEWESFAEWGE--DLEVNIAKVDVTE---QP-------------------------G 68 (126)
T ss_dssp TSSE-EEEEEECSSCH-HHHHHHHHHHHHHHHHG--GGTCEEEEEETTT---CH-------------------------H
T ss_pred HCCC-EEEEEECCCCH-HHHHHHHHHHHHHHHHC--CCCEEEEECCCCC---CH-------------------------H
T ss_conf 5899-99999899998-99998899999998734--5503333102422---78-------------------------8
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
+++.|++. ..++++++ ++|+... |.+..+.+.+.+-|++...
T Consensus 69 l~~~~~V~------------------~~Pti~~~-~~g~~~~-y~G~~~~~~l~~fi~~~~~ 110 (126)
T 1x5e_A 69 LSGRFIIN------------------ALPTIYHC-KDGEFRR-YQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp HHHHTTCC------------------SSSEEEEE-ETTEEEE-CCSCCCHHHHHHHHHTCGG
T ss_pred HHHHCCCC------------------EECEEEEE-ECCEEEE-EECCCCHHHHHHHHHCCCC
T ss_conf 99986992------------------74879999-8997999-7689999999999981547
No 147
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum 3D7} SCOP: c.47.1.1
Probab=97.40 E-value=0.0008 Score=42.63 Aligned_cols=85 Identities=16% Similarity=0.166 Sum_probs=55.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++.++|+|+.+||+ .|....+.+.++.++++ +++++.|.+| +.+ .+
T Consensus 25 ~~~~vvv~F~a~wC~-~C~~~~p~l~~l~~~~~----~v~~~~vd~d---~~~-------------------------~l 71 (112)
T 1syr_A 25 QNELVIVDFFAEWCG-PCKRIAPFYEECSKTYT----KMVFIKVDVD---EVS-------------------------EV 71 (112)
T ss_dssp HCSEEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TTH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CHHHCCCCCHHHHHCCC----CCEEEECCCC---CCH-------------------------HH
T ss_conf 899799999899985-54413764101221167----5126752453---389-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
++.|++.. .+++.++ ++|+.+..+.+ .+++++.+-|++
T Consensus 72 ~~~~~V~~------------------~PTi~~~-k~G~~v~~~~G-~~~~~l~~~i~k 109 (112)
T 1syr_A 72 TEKENITS------------------MPTFKVY-KNGSSVDTLLG-ANDSALKQLIEK 109 (112)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHT
T ss_pred HHHCCCEE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf 99869918------------------4669999-89999999949-298999999998
No 148
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.39 E-value=0.00063 Score=43.24 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=66.2
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHH
Q ss_conf 78849967999960477765446888877655543024433305887651433333057777753136864224589889
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPID 130 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~ 130 (201)
.++-+.+..||.|...||| .|...-+.+..+.+.... .....+.++.+|. |... +
T Consensus 13 ~~~~~~~~~Lv~F~a~~Cp-~Ck~~~~~i~~~~~~~~~-~~~~~i~~v~vd~--~~~~---~------------------ 67 (116)
T 3dml_A 13 DDDDKAELRLLMFEQPGCL-YCARWDAEIAPQYPLTDE-GRAAPVQRLQMRD--PLPP---G------------------ 67 (116)
T ss_dssp ------CEEEEEEECTTCH-HHHHHHHHTTTTGGGSHH-HHHSCEEEEETTS--CCCT---T------------------
T ss_pred CCHHCCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHH-HCCCCEEEEEECC--CCCH---H------------------
T ss_conf 7011368489999899984-378746888877655255-1268538998147--6698---8------------------
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 89888860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
++..|+ |...++++++ ++|+.+..+.+-.+++.....|++++++..
T Consensus 68 ---l~~~~~------------------V~g~PT~i~~-~~G~~v~r~~Gy~~~e~F~~~L~~~l~~~~ 113 (116)
T 3dml_A 68 ---LELARP------------------VTFTPTFVLM-AGDVESGRLEGYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp ---CBCSSC------------------CCSSSEEEEE-ETTEEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_pred ---HHHHCC------------------CCCCCEEEEE-ECCEEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf ---999869------------------7358848986-399996356699999999999999984138
No 149
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.39 E-value=0.00018 Score=46.49 Aligned_cols=47 Identities=19% Similarity=-0.043 Sum_probs=37.0
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 88499679999604777654468888776555430244333058876514
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
..-+++.++|+||.+||+ .|....+.+.++.+++.. ..++++.|.+|
T Consensus 22 ~~~~~~~~lV~F~A~WC~-~C~~~~P~~~~la~~~~~--~~v~~~~vd~d 68 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSN-DCQSFAPIYADLSLKYNC--TGLNFGKVDVG 68 (137)
T ss_dssp HHSTTSCEEEEECCTTCS-TTTTTHHHHHHHHHHHCS--SSCEEEECCTT
T ss_pred HHCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCC--CCCEEEEEECC
T ss_conf 858997099999899998-999771789999987441--46649999898
No 150
>2qsi_A Putative hydrogenase expression/formation protein HUPG; MCSG, PSI-2, SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris CGA009}
Probab=97.35 E-value=0.0021 Score=40.11 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=64.3
Q ss_pred CCCEEEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 99679999604777--6544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 55 YIKPSIVFFGFTNC--SAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 55 ~Gk~~li~F~~T~C--pd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
.+++++++||..+| | .|....+.+.++.++++. ++.++.|.+| .. .
T Consensus 32 ~~~~~V~ff~~~~cr~~-~c~~~~pvl~ela~~~~~---~v~~~~vd~~---~~-------------------------~ 79 (137)
T 2qsi_A 32 SGKIVVLFFRGDAVRFP-EAADLAVVLPELINAFPG---RLVAAEVAAE---AE-------------------------R 79 (137)
T ss_dssp SSSEEEEEECCCTTTCT-THHHHHHHHHHHHHTSTT---TEEEEEECGG---GH-------------------------H
T ss_pred CCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHCCC---CEEEEEEECC---CC-------------------------H
T ss_conf 89838999960776680-077899999999997689---7799999752---58-------------------------9
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.+++.|+|.. .++++++ .+|+.++.+.+..+.+++.+.|+++|..
T Consensus 80 ~l~~~~~V~~------------------~Pt~~~f-~~Gk~v~~~~G~~~~~~l~~~i~~~L~~ 124 (137)
T 2qsi_A 80 GLMARFGVAV------------------CPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp HHHHHHTCCS------------------SSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCC------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9999719751------------------7879999-9998955573789999999999998725
No 151
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.34 E-value=0.00036 Score=44.74 Aligned_cols=105 Identities=10% Similarity=0.194 Sum_probs=63.4
Q ss_pred CCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 29997967788499679999604777654468888776555430244333058876514333330577777531368642
Q gi|254780281|r 43 AQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRII 122 (201)
Q Consensus 43 d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~ 122 (201)
..+++.+..---++|.++|.|+.+||+ .|....+.+.++.+++...+.++.++-|..| +.++
T Consensus 11 ~l~~~~f~~~l~~~k~vlV~F~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---~~~~-------------- 72 (120)
T 1mek_A 11 VLRKSNFAEALAAHKYLLVEFYAPWCG-HCKALAPEYAKAAGKLKAEGSEIRLAKVDAT---EESD-------------- 72 (120)
T ss_dssp ECCTTTHHHHHHHCSEEEEEEECSSCS-TTSTTHHHHHHHHHTTTTTCCCCBCEEEETT---TCCS--------------
T ss_pred ECCHHHHHHHHHCCCCEEEEEECCCCC-CHHHCCHHHHHHHHHHHHHCCCCCCCEEECC---CCHH--------------
T ss_conf 978889999996699799999899992-6333123688887887763356531023343---2899--------------
Q ss_pred CCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE--EEECCCCCHHHHHHHHHHHHH
Q ss_conf 2458988989888860908862256556777752587420699985898299--985789888999999999985
Q gi|254780281|r 123 GISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIV--GVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 123 ~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~--~~~~~~~~~~~i~~~i~~ll~ 195 (201)
+.+.|++ .+.++++++ ++|+.. ..|.+..+.+.+.+-|++.+.
T Consensus 73 -----------~~~~~~i------------------~~~Pt~~~~-~~G~~~~~~~~~g~~~~~~l~~fi~~~~g 117 (120)
T 1mek_A 73 -----------LAQQYGV------------------RGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp -----------SHHHHTC------------------CSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred -----------HHHHCCC------------------EEECEEEEE-ECCEEEEEEEEECCCCHHHHHHHHHHHHC
T ss_conf -----------9998798------------------072779999-89999653796078999999999998677
No 152
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.15 E-value=0.0042 Score=38.25 Aligned_cols=93 Identities=11% Similarity=0.167 Sum_probs=58.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 99679999604777654468888776555430244-33305887651433333057777753136864224589889898
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT-GTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~-~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
.++.+++.|..+||+ .|+...+.+.++...+... ..++.+.-|..+ ..+ .
T Consensus 133 ~~~~~~v~F~ap~C~-~C~~~~p~~~~~a~~~~~~~~~~i~~~~v~~~---~~~-------------------------~ 183 (226)
T 1a8l_A 133 DQDVRILVFVTPTCP-YCPLAVRMAHKFAIENTKAGKGKILGDMVEAI---EYP-------------------------E 183 (226)
T ss_dssp CSCEEEEEEECSSCT-THHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG---GCH-------------------------H
T ss_pred CCCEEEEEEECCCCC-CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC---CCH-------------------------H
T ss_conf 798289999747764-34899999999987560113455216898445---699-------------------------8
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 88860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
+++.|++. ..+++ ++.++|+-+..|.+..+.+++++.|...|+
T Consensus 184 ~~~~~~V~------------------~~Pt~-~~~~~G~~~~~~~G~~~~~~~~e~l~~~~~ 226 (226)
T 1a8l_A 184 WADQYNVM------------------AVPKI-VIQVNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp HHHHTTCC------------------SSCEE-EEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHCCCE------------------EEEEE-EEEECCCEEEEEECCCCHHHHHHHHHHHHC
T ss_conf 99976976------------------84569-999899370687689999999999998529
No 153
>1x5c_A Protein disulfide-isomerase; DSI, ERBA2L, GIT, PDI, PDIA1, PO4DB, PO4HB, prohb, thioredoxin like domain, redox, structural genomics; NMR {Homo sapiens}
Probab=97.11 E-value=0.0023 Score=39.89 Aligned_cols=91 Identities=14% Similarity=0.083 Sum_probs=59.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|.++|.|+.+||| .|-...+.+.++...+.+ ++.++.+.+|-+.+.
T Consensus 24 ~~~~~lv~fya~wC~-~C~~~~p~~~~la~~~~~---~~~~~~v~~d~~~~~---------------------------- 71 (121)
T 1x5c_A 24 EKKNVFVEFYAPWCG-HCKQLAPIWDKLGETYKD---HENIVIAKMDSTANE---------------------------- 71 (121)
T ss_dssp TTCEEEEEEECSSCH-HHHHHHHHHHHHHGGGSS---CSSEEEEEEETTTCC----------------------------
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHCC---CCCEEEEEEECCHHH----------------------------
T ss_conf 899299999879998-899876999999987436---751589986179757----------------------------
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCC-CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898-299985789888999999999985
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAG-SIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G-~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
++.|++ .-.++++++...+ +....|.+..+.+.+.+-|++...
T Consensus 72 ~~~~~I------------------~~~Pti~~f~~~~~~~~~~~~g~~~~~~l~~fi~~~~~ 115 (121)
T 1x5c_A 72 VEAVKV------------------HSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQ 115 (121)
T ss_dssp BTTBCC------------------CSSSEEEEECSCSSCCCEECCSCCSHHHHHHHHHHTSC
T ss_pred HHHCCC------------------EEECEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCC
T ss_conf 865495------------------07257999989983046783189999999999996687
No 154
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.06 E-value=0.001 Score=42.00 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=53.0
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
Q ss_conf 79999604777654468888776555430244333058876514333330577777531368642245898898988886
Q gi|254780281|r 58 PSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRVAKN 137 (201)
Q Consensus 58 ~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~ 137 (201)
+.+..|+.+||+ .|+...+.+.++.++++ .++.++.|.+|-.+ .+++.
T Consensus 3 v~V~~F~a~wC~-~C~~~~p~~~~l~~~~~---~~v~~~~i~~~~~~----------------------------~l~~~ 50 (85)
T 1nho_A 3 VNIEVFTSPTCP-YCPMAIEVVDEAKKEFG---DKIDVEKIDIMVDR----------------------------EKAIE 50 (85)
T ss_dssp CCEEEESCSSSC-CSTTHHHHHHHHHHHHC---SSCCEEEECTTTCG----------------------------GGGGG
T ss_pred EEEEEEECCCCC-CHHHHHHHHHHHCCCCC---CEEEEEECCCCCCH----------------------------HHHHH
T ss_conf 999999999983-15879999965333352---01389861454589----------------------------99998
Q ss_pred CCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 090886225655677775258742069998589829998578988899999999998
Q gi|254780281|r 138 FRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLI 194 (201)
Q Consensus 138 ~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll 194 (201)
|++. ..++ +++|.+++ +.+..+.+++.+.|++.|
T Consensus 51 ~~V~------------------~~Pt-~~~~~~~~----~~G~~~~~~l~~~i~~~l 84 (85)
T 1nho_A 51 YGLM------------------AVPA-IAINGVVR----FVGAPSREELFEAINDEM 84 (85)
T ss_dssp TCSS------------------CSSE-EEETTTEE----EECSSCCHHHHHHHHHHC
T ss_pred CCCE------------------EECE-EEEECCEE----EECCCCHHHHHHHHHHHH
T ss_conf 2982------------------7597-99907579----994899999999999842
No 155
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.02 E-value=0.00059 Score=43.43 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=37.5
Q ss_pred HHHHCCCEEEEEEEC-------CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 788499679999604-------777654468888776555430244333058876514
Q gi|254780281|r 51 LSSLYIKPSIVFFGF-------TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~-------T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
+.+.+||.++|+|+. +||| .|....+.+.++.+.+. .++.++.|.+|
T Consensus 19 l~~~~~k~v~v~F~a~~~~~g~~WC~-~Ck~~~p~~~~~~~~~~---~~~~~~~v~v~ 72 (123)
T 1wou_A 19 VEQHNGKTIFAYFTGSKDAGGKSWCP-DCVQAEPVVREGLKHIS---EGCVFIYCQVG 72 (123)
T ss_dssp HHTTTTSEEEEEEECCBCTTCCBSCH-HHHHHHHHHHHHGGGCC---TTEEEEEEECC
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCC-CHHHHHHHHHHHHHHCC---CCEEEEEEECC
T ss_conf 99769987999995467888998897-53565789999998607---97599999876
No 156
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD protein, structural genomics, structural genomics consortium, SGC, unknown function; 1.73A {Plasmodium yoelii}
Probab=96.92 E-value=0.00081 Score=42.57 Aligned_cols=59 Identities=12% Similarity=0.136 Sum_probs=41.5
Q ss_pred EEEEC-CCCCEECHHH--HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 07982-9997967788--499679999604777654468888776555430244333058876514
Q gi|254780281|r 39 VHLVA-QDGTDFSLSS--LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 39 f~L~d-~~G~~~~~~~--~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
|-|+- ++|..+...- =++|+++|.||..||| .|....+.+.++.+++.+ .+.++.|.+|
T Consensus 21 ~~l~~L~~~~~vDqaI~~e~dkvVVV~F~a~wC~-~C~~m~p~L~kla~~~~~---~~~~~~VDiD 82 (160)
T 2av4_A 21 FMLQHLNSGWAVDQAIVNEDERLVCIRFGHDYDP-DCMKMDELLYKVADDIKN---FCVIYLVDIT 82 (160)
T ss_dssp CCCEECCSHHHHHHHHHHCSSSEEEEEEECTTSH-HHHHHHHHHHHHHHHHTT---TEEEEEEETT
T ss_pred EEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCC-CHHHCCCEEEECHHCCCC---EEEEEEEECC
T ss_conf 2510048688999999717998899999589885-402024588410216753---6999999774
No 157
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.88 E-value=0.00081 Score=42.59 Aligned_cols=43 Identities=14% Similarity=0.222 Sum_probs=36.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.+|+++|.||..||| .|....+.+.++.+++++ .+.++.|.+|
T Consensus 22 ~~k~VvV~F~a~wC~-~C~~~~p~l~~la~~~~~---~~~~~~VD~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDP-TCMKMDEVLYSIAEKVKN---FAVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSH-HHHHHHHHHHHHHHHHTT---TEEEEEEETT
T ss_pred CCCEEEEEEECCCCC-CCCCCCHHHHHHHHHHHC---CEEEEEEECC
T ss_conf 998899999599588-877844219999999624---2589885144
No 158
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.86 E-value=0.00018 Score=46.53 Aligned_cols=91 Identities=18% Similarity=0.181 Sum_probs=57.3
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHH
Q ss_conf 84996799996047776544688887765554302443330588765143333305777775313686422458988989
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVM 132 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~ 132 (201)
.-.||+++|.|+.+||+ .|-...+.+.++.+++.. +.++.+.+| +.++
T Consensus 33 ~~~~k~vvV~F~a~wC~-~C~~~~p~~~~l~~~~~~----~~~~~~~~d---~~~~------------------------ 80 (130)
T 1wmj_A 33 KEAGKVVIIDFTASWCG-PCRFIAPVFAEYAKKFPG----AVFLKVDVD---ELKE------------------------ 80 (130)
T ss_dssp HTTTCBCBEECCSSSCS-CSSSSHHHHHHHHHHCTT----BCCEECCTT---TSGG------------------------
T ss_pred HHCCCEEEEEEECCCCC-CHHHHCCHHHHHHHHCCC----CCEEEEECC---CCHH------------------------
T ss_conf 63299799999689980-725531247766553477----630477422---1022------------------------
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 133 RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 133 ~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+++.|++.. .++ +++-++|+.+..+.+ .+++++.+.|++.+..
T Consensus 81 -l~~~~~I~~------------------~PT-~~~~~~G~~v~~~~G-~~~~~l~~~i~k~~~~ 123 (130)
T 1wmj_A 81 -VAEKYNVEA------------------MPT-FLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -GHHHHTCCS------------------SCC-CCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -HHHHCCCCC------------------CCE-EEEEECCEEEEEEEC-CCHHHHHHHHHHHCCC
T ss_conf -254124166------------------687-999989999999959-6999999999997399
No 159
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.85 E-value=0.0088 Score=36.34 Aligned_cols=46 Identities=9% Similarity=0.125 Sum_probs=35.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
+++.++|.|...||| .|....+.+.++.+.+......+.+..|..|
T Consensus 31 ~~~~~~V~Fy~~wC~-~C~~~~p~~~~la~~~~~~~~~v~~~~vd~~ 76 (241)
T 3idv_A 31 DKDTVLLEFYAPWCG-HCKQFAPEYEKIANILKDKDPPIPVAKIDAT 76 (241)
T ss_dssp TCSEEEEEEECTTCH-HHHHHHHHHHHHHHHHHTSSSCCCEEEEETT
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 199899999899998-9999999999999875312676404884031
No 160
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.82 E-value=0.0031 Score=39.02 Aligned_cols=92 Identities=8% Similarity=0.038 Sum_probs=58.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
+++|+++.|+.+||| .|....+.+.++.++++ ++.++-| |-+ + +
T Consensus 22 ~~~~Vvv~f~~~~c~-~C~~l~p~l~~la~~~~----~v~f~~v--d~~----~-------------------------~ 65 (118)
T 3evi_A 22 EDVWVIIHLYRSSIP-MCLLVNQHLSLLARKFP----ETKFVKA--IVN----S-------------------------C 65 (118)
T ss_dssp TTCEEEEEEECTTSH-HHHHHHHHHHHHHHHCT----TSEEEEE--EGG----G-------------------------T
T ss_pred CCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCC----CCEEEEE--CCC----C-------------------------C
T ss_conf 997899999999981-14332189999999779----8289998--343----3-------------------------1
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC---CHHHHHHHHHHHHHHCCCCC
Q ss_conf 88609088622565567777525874206999858982999857898---88999999999985143349
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD---DSDSAIEKINRLITYGNVVK 201 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~---~~~~i~~~i~~ll~~~~~~~ 201 (201)
++.|++ ...+++.++ ++|+.+..+.+.. ..+.-.++|+..|.+..+++
T Consensus 66 ~~~~~V------------------~~~Ptl~~~-k~G~~v~~~~G~~~~~~~~~~~~~le~~L~~~g~~~ 116 (118)
T 3evi_A 66 IQHYHD------------------NCLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAEVGAIQ 116 (118)
T ss_dssp STTCCG------------------GGCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHTTTSCC
T ss_pred HHHCCC------------------CCCCEEEEE-ECCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 555144------------------689879999-999998889774246877688999999999839966
No 161
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.81 E-value=0.0071 Score=36.90 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|.++|.|+.+||+ .|-...+.+.++.+.+... ..++++.+|-+.. + .+
T Consensus 24 ~~k~vvV~fya~wC~-~C~~~~p~~~~~a~~~~~~---~~~~~~~~d~~~~-~-------------------------~l 73 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCG-HCKQLEPIYTSLGKKYKGQ---KDLVIAKMDATAN-D-------------------------IT 73 (133)
T ss_dssp TTSEEEEEECCTTCS-HHHHHHHHHHHHHHHHTTS---SSEEEEEECTTTS-C-------------------------CC
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCCC---CEEEEEEEECCCC-H-------------------------HH
T ss_conf 899299999889998-8996617777888875025---3046787406559-9-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCC---EEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 88609088622565567777525874206999858982---9998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGS---IVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~---i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|++ ...++++++ ++|+ ...++.+..+.+.+.+-|++-+.+.
T Consensus 74 ~~~~~I------------------~~~Pti~~f-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 120 (133)
T 2dj3_A 74 NDQYKV------------------EGFPTIYFA-PSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CSSCCC------------------SSSSEEEEE-CTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred HHHCCC------------------CEECEEEEE-ECCEEEEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 998799------------------543849999-89908455750478879999999999706655
No 162
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} PDB: 1xbs_A
Probab=96.43 E-value=0.0046 Score=38.05 Aligned_cols=43 Identities=21% Similarity=0.296 Sum_probs=34.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.+|+++|.||..||+ .|....+.+.++.+++.+ .+.++.|.+|
T Consensus 22 ~~k~Vvv~F~a~wc~-~C~~~~p~l~~~a~~~~~---~~~~~~VD~d 64 (149)
T 3gix_A 22 AEKVLVLRFGRDEDP-VCLQLDDILSKTSSDLSK---MAAIYLVDVD 64 (149)
T ss_dssp CSSEEEEEEECTTSH-HHHHHHHHHHHHHTTTTT---TEEEEEEETT
T ss_pred CCCEEEEEECCCCCC-CHHHHHHHHHHHHHHHCC---CCEEEEEECC
T ss_conf 998799998189994-831100459888987177---7279999766
No 163
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.20 E-value=0.07 Score=30.91 Aligned_cols=112 Identities=10% Similarity=0.074 Sum_probs=64.0
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHH---HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHH
Q ss_conf 849967999960477765446888877---65554302443330588765143333305777775313686422458988
Q gi|254780281|r 53 SLYIKPSIVFFGFTNCSAVCPTTLSRL---DRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPI 129 (201)
Q Consensus 53 ~~~Gk~~li~F~~T~Cpd~Cp~~l~~l---~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~ 129 (201)
.-++||++|||...||++ |.....+. ..+.+.|.+ ++|++.+|.+. ++..+.....+.. ....
T Consensus 52 k~e~K~llvyl~~~~~~~-c~~f~~~vl~~~~V~~~Ln~-----nFV~~~~Dv~~--~e~~~~~~~~~~~------~~~~ 117 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVL-TNVFCSQMLCAESIVSYLSQ-----NFITWAWDLTK--DSNRARFLTMCNR------HFGS 117 (178)
T ss_dssp TTTCCEEEEEEECSSCSH-HHHHHHHTTTCHHHHHHHHH-----TEEEEEEECCS--HHHHHHHHHHHHH------HTCH
T ss_pred HHCCCEEEEEEECCCCCC-HHHHHHHHCCCHHHHHHHHC-----CEEEEEEECCC--CHHHHHHHHHHHC------CCCC
T ss_conf 980997999997899822-88999994698999999970-----87999975678--3157788887640------1571
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCC---EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9898888609088622565567777525874206999858982---999857898889999999999851
Q gi|254780281|r 130 DVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGS---IVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 130 ~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~---i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
........+++. ..+.+.++++.|. +....++..+++++...|...+..
T Consensus 118 ~~~~~~~~~~~~------------------~~P~~~~i~~~~~~~~~l~~l~G~~s~~ell~~L~~~~e~ 169 (178)
T 2ec4_A 118 VVAQTIRTQKTD------------------QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEI 169 (178)
T ss_dssp HHHHHHHHSCST------------------TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCC------------------CCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 788887523667------------------8873788415898633788987889999999999999999
No 164
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.036 Score=32.63 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=35.1
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 9679999604777654468888776555430244333058876514
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.++++|.|+..||+ .|....+.+.++.+++.. .+.+..|.+|
T Consensus 35 ~~~~lV~Fya~wC~-~Ck~l~P~~e~~a~~~~~---~~~~~~v~~D 76 (298)
T 3ed3_A 35 NYTSLVEFYAPWCG-HCKKLSSTFRKAAKRLDG---VVQVAAVNCD 76 (298)
T ss_dssp SSCEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TSEEEEEETT
T ss_pred CCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCC---CCEEEEEECC
T ss_conf 98399999799998-999899999999998058---9659999756
No 165
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, stress response; 2.60A {Homo sapiens}
Probab=96.18 E-value=0.061 Score=31.26 Aligned_cols=45 Identities=7% Similarity=0.004 Sum_probs=33.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC---CCCEEEEEEEE
Q ss_conf 99679999604777654468888776555430244---33305887651
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT---GTLLNAYFITV 100 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~---~~~v~~v~Isv 100 (201)
..+.++|.|...||+ .|....+...++...|.+. +.+|.+.-|..
T Consensus 21 ~~~~~lV~FYapwC~-hCk~l~p~~~~~a~~l~~~~~~~~~v~~a~Vdc 68 (382)
T 2r2j_A 21 NADVALVNFYADWCR-FSQMLHPIFEEASDVIKEEFPNENQVVFARVDC 68 (382)
T ss_dssp HCSEEEEEEECTTCH-HHHHHHHHHHHHHHHHTTCC---CCEEEEEEET
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 799899999898998-999889999999999877517789759999989
No 166
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix K1}
Probab=96.14 E-value=0.068 Score=30.96 Aligned_cols=93 Identities=11% Similarity=0.160 Sum_probs=60.6
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHH
Q ss_conf 88499679999604777654468888776555430244-33305887651433333057777753136864224589889
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT-GTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPID 130 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~-~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~ 130 (201)
....++..++.|...||| .||...+.+.++...+... +.+|.+..|..+ ..+
T Consensus 134 ~~id~~~~i~~F~ap~C~-~C~~~~~~~~~~A~~~~~~~n~~I~~~~id~~---~~~----------------------- 186 (243)
T 2hls_A 134 KSLKGRVHIETIITPSCP-YCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY---ENP----------------------- 186 (243)
T ss_dssp HHCCSCEEEEEEECSSCS-SHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT---TCH-----------------------
T ss_pred HHCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH---HCH-----------------------
T ss_conf 612787079999848998-65889999999999844435872899853702---376-----------------------
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.++..|+|.. -+++++ +|+.. |.+..+.+++++.|++....
T Consensus 187 --~l~~~y~V~~------------------vPti~i---ng~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 187 --DIADKYGVMS------------------VPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp --HHHHHTTCCS------------------SSEEEE---TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred --HHHHHCCCCC------------------CCEEEE---CCEEE--EECCCCHHHHHHHHHHHHHH
T ss_conf --7898749601------------------376999---99578--85389999999999986330
No 167
>3f8u_A Protein disulfide-isomerase A3ERP57; alternative splicing, endoplasmic reticulum, glycoprotein, immunoglobulin domain, membrane, microsome, protein disulfide isomerase; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.03 E-value=0.062 Score=31.22 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=21.6
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE
Q ss_conf 967999960477765446888877655543024433305887651
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV 100 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv 100 (201)
+|.++|.|...||+ .|....+.+.++.+.+.+. .++.+..|..
T Consensus 370 ~kdvlV~fyapwC~-~C~~~~~~~~~~a~~~~~~-~~v~~a~id~ 412 (481)
T 3f8u_A 370 NKDVLIEFYAPWCG-HCKNLEPKYKELGEKLSKD-PNIVIAKMDA 412 (481)
T ss_dssp TCEEEEEEECTTBH-HHHHHHHHHHHHHHHTTTC-SSEEEEEEET
T ss_pred CCCEEEEEECCCCH-HHHHHHHHHHHHHHHHCCC-CCEEEEEEEC
T ss_conf 99769999899976-7899999999999984789-9659999989
No 168
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=95.99 E-value=0.033 Score=32.89 Aligned_cols=137 Identities=10% Similarity=-0.011 Sum_probs=75.8
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH--HHHHHHH--------------
Q ss_conf 884996799996047776544688887765554302443330588765143333305--7777753--------------
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE--VMKKFVQ-------------- 115 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e--~l~~y~~-------------- 115 (201)
..-.||+.++-|+=-.|| .|-..-+.+.+..+...+ .+.+..+.+.....+.. .+...+.
T Consensus 21 ~~~~~kv~IvEf~dy~Cp-~C~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 96 (193)
T 2rem_A 21 APLAGKIEVVEIFGYTCP-HCAHFDSKLQAWGARQAK---DVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFE 96 (193)
T ss_dssp SCCTTCEEEEEEECTTCH-HHHHHHHHHHHHHHTSCT---TEEEEEEECCCSTTHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC---CEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999998589998888887-179897989999885666---5047888325684428999999999994750033489999
Q ss_pred H-CCCCE-ECCCCCHHHHHHHHHHCCEEEEECCCCCC------------CCCCCEEEEEEEEEEEECCCCCEEEEECCCC
Q ss_conf 1-36864-22458988989888860908862256556------------7777525874206999858982999857898
Q gi|254780281|r 116 R-FSDRI-IGISGDPIDVMRVAKNFRIYVNNVLAEKS------------GVEEKYFVDHTTALLLFDTAGSIVGVIPYKD 181 (201)
Q Consensus 116 ~-~~~~~-~~ltg~~~~i~~l~~~~~v~~~~~~~~~~------------~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~ 181 (201)
. +...+ ..-..+.+.+..++...|+-..+....-. .....+.|+.++++++ +|++.. .+.
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~a~~~g~d~~~~~~~~~~~~~~~~v~~~~~~~~~~gV~gTPT~iI---nGk~~v---~~~ 170 (193)
T 2rem_A 97 AIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVV---NGRYMV---TGH 170 (193)
T ss_dssp HHHTTCCSCSTTCCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHCCSSSSEEEE---TTTEEE---CCS
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEEEC---CCC
T ss_conf 99987541034321899999999838508999999747999999999999999809972677999---999965---899
Q ss_pred CHHHHHHHHHHHHHHCC
Q ss_conf 88999999999985143
Q gi|254780281|r 182 DSDSAIEKINRLITYGN 198 (201)
Q Consensus 182 ~~~~i~~~i~~ll~~~~ 198 (201)
+.+++.+.|..||++++
T Consensus 171 ~~~~~~~~i~~li~~~r 187 (193)
T 2rem_A 171 DFEDTLRITDYLVSRER 187 (193)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 169
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.88 E-value=0.069 Score=30.95 Aligned_cols=90 Identities=12% Similarity=0.146 Sum_probs=59.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++.+++.|.-+||+ .|....+.+.++.+.+.+....+.+..|..| ..+ .+
T Consensus 146 ~~~~~~v~F~~~~c~-~~~~~~p~~~~~a~~~~~~~~~v~~~~id~~---~~~-------------------------~l 196 (241)
T 3idv_A 146 DADIILVEFYAPWCG-HCKKLAPEYEKAAKELSKRSPPIPLAKVDAT---AET-------------------------DL 196 (241)
T ss_dssp HCSEEEEEEECTTCT-GGGGTHHHHHHHHHHHHTSSSCCCEEEEETT---TCH-------------------------HH
T ss_pred CCCEEEEEEECCCCC-HHHCCCHHHHHHHHHHHCCCCCEEEEEEECC---CCH-------------------------HH
T ss_conf 596699999888773-3202486999999986422885699997675---699-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
++.|++. ..+.++++ ++|+.+. |.+..+.+.+.+-|.+-
T Consensus 197 ~~~~~I~------------------~~Ptl~~f-~~g~~~~-y~G~~~~~~l~~fi~~~ 235 (241)
T 3idv_A 197 AKRFDVS------------------GYPTLKIF-RKGRPYD-YNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp HHHTTCC------------------SSSEEEEE-ETTEEEE-CCSCCSHHHHHHHHHHH
T ss_pred HHHCCCC------------------EECEEEEE-ECCEEEE-EECCCCHHHHHHHHHHH
T ss_conf 9987996------------------64779999-9999999-56899999999999985
No 170
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown function; 1.50A {Trypanosoma cruzi}
Probab=95.58 E-value=0.044 Score=32.10 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=34.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.+|.++|.|...||+ .|....+.+.++.+.+........+++..+|
T Consensus 32 ~~k~~lV~Fya~wC~-~Ck~~~p~~~~la~~~~~~~~~~~v~ia~vd 77 (127)
T 3h79_A 32 PEKDVFVLYYVPWSR-HSVAAMRLWDDLSMSQSQKRNHLTFVAARID 77 (127)
T ss_dssp TTCEEEEEEECTTCH-HHHHHHHHHHHHHHHHHTSTTTTTEEEEEEE
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 899499999879897-8998999999999998774279717998626
No 171
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Aquifex aeolicus VF5} PDB: 2ayt_A
Probab=95.22 E-value=0.13 Score=29.37 Aligned_cols=89 Identities=12% Similarity=0.202 Sum_probs=51.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++++++.|...||+ .|+...+.+.++... ..++.+..|..| ..+ .+
T Consensus 135 ~~~~~lv~F~ap~C~-~c~~~~~~~~~~a~~----~~~i~~~~vd~~---~~~-------------------------~~ 181 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCG-YCPSAAVMAWDFALA----NDYITSKVIDAS---ENQ-------------------------DL 181 (229)
T ss_dssp CSCEEEEEEECTTCT-THHHHHHHHHHHHHH----CTTEEEEEEEGG---GCH-------------------------HH
T ss_pred CCCEEEEEEECCCCC-CCHHHHHHHHHHHHH----CCCEEEEEEECC---CCH-------------------------HH
T ss_conf 787089998768887-529999999998755----794799996332---376-------------------------57
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 8860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
++.|++. .-+++++ + +.... |.+..+.+.+.+.|...+.+.+
T Consensus 182 ~~~~~i~------------------~~Pti~~-~--~~~~~-~~G~~~~~~~~~~i~~~~~~~~ 223 (229)
T 2ywm_A 182 AEQFQVV------------------GVPKIVI-N--KGVAE-FVGAQPENAFLGYIMAVYEKLK 223 (229)
T ss_dssp HHHTTCC------------------SSSEEEE-G--GGTEE-EESCCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCC------------------EEEEEEE-C--CCEEE-EECCCCHHHHHHHHHHHHHHHH
T ss_conf 9876972------------------1226998-7--96468-7578999999999999998766
No 172
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio fischeri ES114}
Probab=95.04 E-value=0.015 Score=34.93 Aligned_cols=151 Identities=11% Similarity=0.090 Sum_probs=76.9
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651433333057777
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
+..+.++.-....+. -.|++.++-|+--.|| .|-..-+.+..+.+.+..+ +.+..+.+.........++.
T Consensus 5 ~~eg~~y~~~~~~~~------~d~~v~ivEf~dy~Cp-~C~~~~~~l~~~~k~~~~~---~~~~~~~~~~~~~~~~~~a~ 74 (185)
T 3feu_A 5 PKEGVQYEVLSTSLE------NDGMAPVTEVFALSCG-HCRNMENFLPVISQEAGTD---IGKMHITFNQSAHIASMFYY 74 (185)
T ss_dssp CCBTTTEEECSSCCT------TSCCCSEEEEECTTCH-HHHHHGGGHHHHHHHHTSC---CEEEECCSSSHHHHHHHHHH
T ss_pred CCCCCCCEECCCCCC------CCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCHHHHHH
T ss_conf 769986267878888------9998489999727880-5053677768899855655---43267752665321899999
Q ss_pred HHHH--------------CC--CCEEC--CCCCHHHHHHHHHHCCEEEEECCCCC------------CCCCCCEEEEEEE
Q ss_conf 7531--------------36--86422--45898898988886090886225655------------6777752587420
Q gi|254780281|r 113 FVQR--------------FS--DRIIG--ISGDPIDVMRVAKNFRIYVNNVLAEK------------SGVEEKYFVDHTT 162 (201)
Q Consensus 113 y~~~--------------~~--~~~~~--ltg~~~~i~~l~~~~~v~~~~~~~~~------------~~~~~~y~i~H~~ 162 (201)
.+.. |+ ..+.. .....+.+..+....|+......... ......|-|+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~gI~gTP 154 (185)
T 3feu_A 75 AAEMQVDGAPDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVP 154 (185)
T ss_dssp HHHTTSSSSCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSS
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999862506899999999988764212320016899999873776899999976077777999999999981788885
Q ss_pred EEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 6999858982999857898889999999999851
Q gi|254780281|r 163 ALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 163 ~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
++++ +|+++....+..+.+++.+.|+.||++
T Consensus 155 t~vI---nGk~~v~~~~~~~~~~l~~~i~~Ll~K 185 (185)
T 3feu_A 155 TFVV---NGKYNVLIGGHDDPKQIADTIRYLLEK 185 (185)
T ss_dssp EEEE---TTTEEECGGGCSSHHHHHHHHHHHHTC
T ss_pred EEEE---CCEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 8999---798973588877999999999999749
No 173
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=94.94 E-value=0.048 Score=31.90 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=73.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH-HHHH-----------CCC--C
Q ss_conf 9967999960477765446888877655543024433305887651433333057777-7531-----------368--6
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK-FVQR-----------FSD--R 120 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~-y~~~-----------~~~--~ 120 (201)
.+|++++.|.--.|| .|-..-+.+.++.+.+.. ++.+..+-+.........-+. ++.. |.. .
T Consensus 24 ~akvtIvef~dy~Cp-~C~~~e~~l~~~~~~~~~---~v~~~~~p~~~~~~~~~~a~~~~a~~~~~~~~~~~~lf~~~~~ 99 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCP-HCAAIEPMVEDWAKTAPQ---DVVLKQVPIAFNAGMKPLQQLYYTLQALERPDLHPKVFTAIHT 99 (195)
T ss_dssp TTCEEEEEEECTTCH-HHHHHHHHHHHHHHTCCT---TEEEEEEECCSSGGGHHHHHHHHHHHHTTCTTHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC---CEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 997699998888986-379897999999973778---7589997435405499999999999964157889999999998
Q ss_pred EECCCCCHHHHHHHHHHCCEEEEECCCCCCC------------CCCCEEEEEEEEEEEECCCCCEEEEEC-CCCCHHHHH
Q ss_conf 4224589889898888609088622565567------------777525874206999858982999857-898889999
Q gi|254780281|r 121 IIGISGDPIDVMRVAKNFRIYVNNVLAEKSG------------VEEKYFVDHTTALLLFDTAGSIVGVIP-YKDDSDSAI 187 (201)
Q Consensus 121 ~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~------------~~~~y~i~H~~~~~lid~~G~i~~~~~-~~~~~~~i~ 187 (201)
+..-..+.+.+..++...|+-..++...-.. ....+.|.-++++++ +|+++.... ...+.+.+.
T Consensus 100 ~~~~~~~~~~l~~~a~~~gid~~~~~~~~~s~~~~~~v~~~~~~~~~~gi~gTPtfiV---nGky~~~~~~~~~~~~~~~ 176 (195)
T 3hd5_A 100 ERKRLFDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLAEAAHIDGTPAFAV---GGRYMTSPVLAGNDYAGAL 176 (195)
T ss_dssp SCCCCCSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHTTCCSSSEEEE---TTTEEECTTTTTGGGTTHH
T ss_pred HCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEE---CCEEECCCCCCCCCHHHHH
T ss_conf 5236342999999999819999999999729667899999999999809843478999---9999637556764799999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999985143
Q gi|254780281|r 188 EKINRLITYGN 198 (201)
Q Consensus 188 ~~i~~ll~~~~ 198 (201)
+.|..||+++|
T Consensus 177 ~~id~ll~k~~ 187 (195)
T 3hd5_A 177 KVVDQLIVQSR 187 (195)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999996
No 174
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=94.74 E-value=0.031 Score=33.07 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=30.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 996799996047776544688887765554302443
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTG 90 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~ 90 (201)
.+|.++|+|+.+||+ .|-...+.+.++.+.+....
T Consensus 24 ~~k~vlV~Fya~wC~-~Ck~~~p~~~~la~~~~~~~ 58 (121)
T 2djj_A 24 DTKDVLIEFYAPWCG-HCKALAPKYEELGALYAKSE 58 (121)
T ss_dssp TTSCEEEEEECSSCT-THHHHHHHHHHHHHHHTTSS
T ss_pred CCCCEEEEEECCCCH-HHHCCCCHHHHHHHHHHHCC
T ss_conf 899699999879884-34334837999999974055
No 175
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.54 E-value=0.031 Score=33.02 Aligned_cols=136 Identities=7% Similarity=0.009 Sum_probs=64.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC-CHHHHHH---------------------
Q ss_conf 996799996047776544688887765554302443330588765143333-3057777---------------------
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD-TPEVMKK--------------------- 112 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD-t~e~l~~--------------------- 112 (201)
.++++++.|+=-.|| .|-..-..+....++...++ +.+..+.++...+ .+.....
T Consensus 16 ~a~~~ivef~dy~CP-~C~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (195)
T 3c7m_A 16 NADKTLIKVFSYACP-FCYKYDKAVTGPVSEKVKDI--VAFTPFHLETKGEYGKQASEVFAVLINKDKAAGISLFDANSQ 92 (195)
T ss_dssp SCTTEEEEEECTTCH-HHHHHHHHTHHHHHHHTTTT--CEEEEEECTTSSTTHHHHHHHHHHHHHHHHHTTCCTTSTTCH
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHCCCC--CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999479999888885-35888898888888735666--149997466676246899999999999899999999999877
Q ss_pred -------HHHHCCCCEECC---CCCHHHHHHHHHHCCEEEEECCCC------------CCCCCCCEEEEEEEEEEEECCC
Q ss_conf -------753136864224---589889898888609088622565------------5677775258742069998589
Q gi|254780281|r 113 -------FVQRFSDRIIGI---SGDPIDVMRVAKNFRIYVNNVLAE------------KSGVEEKYFVDHTTALLLFDTA 170 (201)
Q Consensus 113 -------y~~~~~~~~~~l---tg~~~~i~~l~~~~~v~~~~~~~~------------~~~~~~~y~i~H~~~~~lid~~ 170 (201)
+.+.....+... ......+..++...|+-....... .......+.+..++++++ +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~s~~~~~~v~~~~~~~~~~gv~gTPt~~I---n 169 (195)
T 3c7m_A 93 FKKAKFAYYAAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKASYDVAKIQGVPAYVV---N 169 (195)
T ss_dssp HHHHHHHHHHHHHTSCCCTTTTTCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGHHHHHHHHCSSEEEE---T
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEE---C
T ss_conf 7877999999999863023431125789998877417889998877428889999999999999759831888999---8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 82999857898889999999999851
Q gi|254780281|r 171 GSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 171 G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
|++.....+..+.+.+.+.|+.|+++
T Consensus 170 Gk~~v~~~~~~~~d~l~~~i~~ll~k 195 (195)
T 3c7m_A 170 GKYLIYTKSIKSIDAMADLIRELASK 195 (195)
T ss_dssp TTEEECGGGCCCHHHHHHHHHHHHTC
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 99971688889999999999999768
No 176
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=93.90 E-value=0.042 Score=32.24 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=48.2
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
Q ss_conf 67999960477765446888877655543024433305887651433333057777753136864224589889898888
Q gi|254780281|r 57 KPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRVAK 136 (201)
Q Consensus 57 k~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~ 136 (201)
...++.|+.+||| .|-...+.+.++.++++ +.++.|.+| +.++ +++
T Consensus 29 ~~~vVlf~a~wC~-~C~~~~p~l~~l~~e~~-----~~~~~VDid---~~~~-------------------------l~~ 74 (107)
T 2fgx_A 29 PRKLVVYGREGCH-LCEEMIASLRVLQKKSW-----FELEVINID---GNEH-------------------------LTR 74 (107)
T ss_dssp CCCEEEEECSSCH-HHHHHHHHHHHHHHHSC-----CCCEEEETT---TCHH-------------------------HHH
T ss_pred CCEEEEEECCCCC-CHHHHHHHHHHHHHHCC-----CCEEEEEEC---CHHH-------------------------HHH
T ss_conf 8889999899997-48889999999764346-----304788702---3599-------------------------999
Q ss_pred HCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 60908862256556777752587420699985898299985789888999999
Q gi|254780281|r 137 NFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 137 ~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
.||+. ++ ++++..+|+.+..+ ..+.+.+.+-
T Consensus 75 ~y~v~---iP-----------------tl~~~~~G~el~~~--~~d~~~lr~~ 105 (107)
T 2fgx_A 75 LYNDR---VP-----------------VLFAVNEDKELCHY--FLDSDVIGAY 105 (107)
T ss_dssp HSTTS---CS-----------------EEEETTTTEEEECS--SCCCHHHHHH
T ss_pred HHCCC---CC-----------------EEEEEECCEEEEEE--CCCHHHHHHH
T ss_conf 95950---23-----------------69999899999981--4899999997
No 177
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain ATCC 700825 / FA 1090), DSBC, structural genomics, unknown function; 2.00A {Neisseria gonorrhoeae fa 1090}
Probab=93.39 E-value=0.22 Score=27.84 Aligned_cols=113 Identities=11% Similarity=0.182 Sum_probs=58.3
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH--------------HHHHHHHHCCCCE
Q ss_conf 96799996047776544688887765554302443330588765143333305--------------7777753136864
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE--------------VMKKFVQRFSDRI 121 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e--------------~l~~y~~~~~~~~ 121 (201)
||++++.|.=..|| .|....+.+.++ .+.+ ...+.+.+-+.+.... .+..+...+....
T Consensus 14 ak~~iv~F~D~~Cp-yC~~~~~~l~~~----~~~~--~~~~~~~~~~~~~~s~~~a~~~~~~~d~~~a~~~~~~~~~~~~ 86 (147)
T 3gv1_A 14 GKLKVAVFSDPDCP-FCKRLEHEFEKM----TDVT--VYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp CCEEEEEEECTTCH-HHHHHHHHHTTC----CSEE--EEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCEEEEEEECCCCH-HHHHHHHHHHHH----CCCE--EEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf 99899999897987-289899998750----5730--6999803778883899999999974276899999997488875
Q ss_pred EC--CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 22--458988989888860908862256556777752587420699985898299985789888999999999985143
Q gi|254780281|r 122 IG--ISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 122 ~~--ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
.. .....+.-..+++.+|+. -++++|+. +|+++ ++..+++++.+.|++...+|.
T Consensus 87 ~~~~~~~~i~~~~~la~~lGv~------------------gTPt~~~~--nG~~i---~G~~~~~~l~~~i~~~~k~g~ 142 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFGFN------------------GTPTLVFP--NGRTQ---SGYSPMPQLEEIIRKNQQEGH 142 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTTCC------------------SSCEEECT--TSCEE---ESCCCTTHHHHHHHHTSCC--
T ss_pred CHHHHHHHHHHHHHHHHHHCCC------------------CCCEEEEE--CCEEE---CCCCCHHHHHHHHHHHHHCCC
T ss_conf 2366765899999999992997------------------78859984--99485---599999999999999982588
No 178
>1bed_A DSBA oxidoreductase; TCPG, protein disulfide isomerase, disulfide oxidoreductase; 2.00A {Vibrio cholerae} SCOP: c.47.1.13 PDB: 2ijy_A
Probab=93.15 E-value=0.2 Score=28.12 Aligned_cols=138 Identities=12% Similarity=0.072 Sum_probs=72.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHH--HH----------C---CC
Q ss_conf 996799996047776544688887765554302443330588765143333305777775--31----------3---68
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFV--QR----------F---SD 119 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~--~~----------~---~~ 119 (201)
.++++++-|.--.|| .|-..-..+..+.+++..+. ++....+.+.+..-.....+.++ .. + ..
T Consensus 17 ~~~~~Vief~d~~CP-~C~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (181)
T 1bed_A 17 SSSPVVSEFFSFYCP-HCNTFEPIIAQLKQQLPEGA-KFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIH 94 (181)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHTSCTTC-EEEEEECSSSSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCC-CCHHHHHHHHHHHHHCCCCE-EEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 999889999889980-52878777677888556642-7999962566532069999999999982745789999999998
Q ss_pred CEECCCCCHHHHHHHHHHCCEEEEECCCCCCC------------CCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHH
Q ss_conf 64224589889898888609088622565567------------777525874206999858982999857898889999
Q gi|254780281|r 120 RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSG------------VEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAI 187 (201)
Q Consensus 120 ~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~------------~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~ 187 (201)
.+..-..+.+.+..++++.|+-.......-.. ....+-|..++.+++ +|++..-.....+.+++.
T Consensus 95 ~~~~~~~~~~~l~~~a~~~gld~~~~~~~~~~~~~~~~v~~~~~~~~~~gI~gTPt~iV---nGk~~~~~~~~~~~~~~~ 171 (181)
T 1bed_A 95 TLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQFQDSGLTGVPAVVV---NNRYLVQGQSVKSLDEYF 171 (181)
T ss_dssp TSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTTEEECGGGCCSHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEEEECCCCCCCHHHHH
T ss_conf 75123004899998887649988999999649999999999999999719861788999---998973787888999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998514
Q gi|254780281|r 188 EKINRLITYG 197 (201)
Q Consensus 188 ~~i~~ll~~~ 197 (201)
+.|+.|+++.
T Consensus 172 ~~i~~L~~~~ 181 (181)
T 1bed_A 172 DLVNYLLTLK 181 (181)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHCC
T ss_conf 9999999675
No 179
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.12 E-value=0.098 Score=30.02 Aligned_cols=39 Identities=8% Similarity=-0.009 Sum_probs=30.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 99679999604777654468888776555430244333058876
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFI 98 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~I 98 (201)
++.|+++.|+.+||+ .|....+.+.++.+++.+ ++++-|
T Consensus 29 ~~~~VvV~f~~~~c~-~C~~l~~~l~~la~~~~~----v~f~~i 67 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVP-MCLVVNQHLSVLARKFPE----TKFVKA 67 (135)
T ss_dssp SSCEEEEEECCTTCH-HHHHHHHHHHHHHHHCSS----EEEEEE
T ss_pred CCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCCC----CEEEEE
T ss_conf 997799999899997-667777999999876798----549999
No 180
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.10 E-value=0.23 Score=27.78 Aligned_cols=83 Identities=8% Similarity=0.228 Sum_probs=49.9
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHH
Q ss_conf 96799996047776544688887765554302443330588765143333305777775313686422458988989888
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRVA 135 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l~ 135 (201)
..+.++.|+..||| .|....+.+.++... ..+..+.+|++.| ++. +
T Consensus 15 ~~p~v~lf~~~~C~-~C~~a~~~l~~~~~~-------~~~~~v~~d~~~~-~~l-------------------------~ 60 (100)
T 1wjk_A 15 ALPVLTLFTKAPCP-LCDEAKEVLQPYKDR-------FILQEVDITLPEN-STW-------------------------Y 60 (100)
T ss_dssp CCCEEEEEECSSCH-HHHHHHHHTSTTSSS-------SEEEEEETTSSTT-HHH-------------------------H
T ss_pred CCCEEEEEECCCCC-CHHHHHHHHHHHHHH-------HHHHHCCCCCCCC-HHH-------------------------H
T ss_conf 99899999898994-379999999999887-------5322103673037-999-------------------------9
Q ss_pred HHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 8609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 136 KNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 136 ~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+.|++. + +. +++ +|+.. +.+..+++.+.+.|++|...
T Consensus 61 ~~y~~~---V----------------Pv-l~v--dg~~~--~~g~~~~~~l~~~L~~l~~~ 97 (100)
T 1wjk_A 61 ERYKFD---I----------------PV-FHL--NGQFL--MMHRVNTSKLEKQLRKLSGP 97 (100)
T ss_dssp HHSSSS---C----------------SE-EEE--SSSEE--EESSCCHHHHHHHHHSSSCS
T ss_pred HHHCCC---C----------------CE-EEE--CCEEE--EEECCCHHHHHHHHHHHHCC
T ss_conf 987998---7----------------96-999--99999--97269999999999997555
No 181
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, periplasm, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1}
Probab=93.09 E-value=0.076 Score=30.67 Aligned_cols=140 Identities=10% Similarity=0.061 Sum_probs=72.4
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH-----------CC--CC
Q ss_conf 499679999604777654468888776555430244333058876514333330577777531-----------36--86
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQR-----------FS--DR 120 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~-----------~~--~~ 120 (201)
-.++++++-|.--.|| .|-..-..+....++...+...++..++ ..|..+........+.. |. ..
T Consensus 23 ~~a~v~ivEf~dy~Cp-~C~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~f~~~~~ 100 (192)
T 3h93_A 23 QPGKIEVVELFWYGCP-HCYAFEPTIVPWSEKLPADVHFVRLPAL-FGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp STTSEEEEEEECTTCH-HHHHHHHHHHHHHHTCCTTEEEEEEECC-CSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCCCCCEEEECCC-CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9998699998888985-2698989999987633555426886676-6644579999999999837357799999999987
Q ss_pred EECCCCCHHHHHHHHHHCCEEEEECCCCCC------------CCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 422458988989888860908862256556------------77775258742069998589829998578988899999
Q gi|254780281|r 121 IIGISGDPIDVMRVAKNFRIYVNNVLAEKS------------GVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 121 ~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~------------~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
+..-..+.+.+..++...|+--......-. .....+-|+-++.+++ +|++......-.+.+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~i~~~~~~a~~~gv~gTPtfiI---nGk~~~~~~~~~~~e~l~~ 177 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV---NGKYRFDIGSAGGPEETLK 177 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTTEEEEHHHHTSHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE---CCEEEECCCCCCCHHHHHH
T ss_conf 6304210678999998728889999998731999999999999999929862788999---8988607756789999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999985143
Q gi|254780281|r 189 KINRLITYGN 198 (201)
Q Consensus 189 ~i~~ll~~~~ 198 (201)
.|+.|+++.+
T Consensus 178 ~i~~L~~k~~ 187 (192)
T 3h93_A 178 LADYLIEKER 187 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 182
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=92.65 E-value=0.15 Score=28.86 Aligned_cols=58 Identities=16% Similarity=0.321 Sum_probs=37.4
Q ss_pred HCCCEEEEEEEC-------CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 499679999604-------777654468888776555430244333058876514333330577777
Q gi|254780281|r 54 LYIKPSIVFFGF-------TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 54 ~~Gk~~li~F~~-------T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
-++.+++++|.. .||. .|....+.++++.+.+.+...+-.++|..+|-+ +.++.-++|
T Consensus 35 ~r~y~~vv~fta~~~~~~~~~C~-~Ck~~~p~~~~lA~~~~~~~~~~~v~f~~vD~d-~n~~l~~~~ 99 (178)
T 3ga4_A 35 VPGYFNILYITMRGTNSNGMSCQ-LCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN-EVPQLVKDL 99 (178)
T ss_dssp CTTCEEEEEEECCSBCTTSCBCH-HHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT-TCHHHHHHT
T ss_pred CCCCEEEEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CCHHHHHHC
T ss_conf 78847999995366665798797-699998999999999764176786799998375-798899976
No 183
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=92.08 E-value=0.22 Score=27.89 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=26.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99679999604777654468888776555430244
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPT 89 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~ 89 (201)
.++++++.|.--.|| .|-..-..+.++.+.++..
T Consensus 23 ~a~v~Ivef~dy~Cp-~C~~~~~~l~~~~~~~~~~ 56 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCP-HCAHLEPVLSKHAKSFKDD 56 (193)
T ss_dssp TTSEEEEEEECTTCH-HHHHHHHHHHHHHTTCCTT
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCCC
T ss_conf 998489998889985-1687857778899874003
No 184
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=91.92 E-value=0.25 Score=27.56 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=72.4
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHH-HHHHHHHHHHCCCCCCEEEEEEEECC-CCCCHHH--HH------------HHHH
Q ss_conf 8849967999960477765446888-87765554302443330588765143-3333057--77------------7753
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTL-SRLDRLLKQVDPTGTLLNAYFITVDP-KRDTPEV--MK------------KFVQ 115 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l-~~l~~~~~~l~~~~~~v~~v~IsvDP-~rDt~e~--l~------------~y~~ 115 (201)
..=.+|++++-|.=-.|| .|-..- ..+.++.+.+.+.+ +++++++.+.- ..++... .. +|.+
T Consensus 7 ~~~~ak~~I~~f~D~~Cp-~C~~~~~~~~~~l~~~~~d~~-~v~~~~~~~~~~~~~s~~aa~a~~~~~~~~~~~~~~~~~ 84 (186)
T 3bci_A 7 SSKNGKPLVVVYGDYKCP-YCKELDEKVMPKLRKNYIDNH-KVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQK 84 (186)
T ss_dssp ----CCCEEEEEECTTCH-HHHHHHHHHHHHHHHHTTTTT-SSEEEEEECCCSCTTHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred CCCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 999999599998889987-389999989999999851157-457998656210013678999999998647577999999
Q ss_pred H-CCC--CEECCCCCHHHHHHHHHHCCEEEEECCC-------CC----------CCCCCCEEEEEEEEEEEECCCCCEEE
Q ss_conf 1-368--6422458988989888860908862256-------55----------67777525874206999858982999
Q gi|254780281|r 116 R-FSD--RIIGISGDPIDVMRVAKNFRIYVNNVLA-------EK----------SGVEEKYFVDHTTALLLFDTAGSIVG 175 (201)
Q Consensus 116 ~-~~~--~~~~ltg~~~~i~~l~~~~~v~~~~~~~-------~~----------~~~~~~y~i~H~~~~~lid~~G~i~~ 175 (201)
. |.. .+..-..+.+.+..+++..|+.-..... .+ ......+.|.-++++++ +|+.
T Consensus 85 ~lf~~~~~~~~~~~~~~~l~~~a~~~gl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~gv~gTPt~iI---nGk~-- 159 (186)
T 3bci_A 85 QLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFI---NGEK-- 159 (186)
T ss_dssp HHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTTCCSSSEEEE---TTEE--
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE--
T ss_conf 99876444214667588999999982999999999985743212899999999999999859843888989---9999--
Q ss_pred EECCCCCHHHHHHHHHHHHHHC
Q ss_conf 8578988899999999998514
Q gi|254780281|r 176 VIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 176 ~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
+.+..+.+.+.+.|+.+|.+.
T Consensus 160 -~~g~~~~~~l~~~id~~lk~~ 180 (186)
T 3bci_A 160 -VEDPYDYESYEKLLKDKIKLE 180 (186)
T ss_dssp -CSCTTCHHHHHHHHHC-----
T ss_pred -ECCCCCHHHHHHHHHHHHHHH
T ss_conf -239899999999999999864
No 185
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=91.55 E-value=0.16 Score=28.76 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=15.2
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 96799996047776544688887765554302
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVD 87 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~ 87 (201)
+|.++|.|...||+ .|....+.+.++.+.+.
T Consensus 376 ~~~~lv~fy~~wc~-~c~~~~~~~~~~a~~~~ 406 (504)
T 2b5e_A 376 KKDVLVLYYAPWCG-HCKRLAPTYQELADTYA 406 (504)
T ss_dssp TCCEEEEEECTTCH-HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH-HHHHHHHHHHHHHHHHH
T ss_conf 87569998189982-66766099999999974
No 186
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=91.21 E-value=0.82 Score=24.46 Aligned_cols=44 Identities=14% Similarity=0.039 Sum_probs=30.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
+.+.++|.|+.+|| |-..-+...++.+.+.+...++.+.-|.++
T Consensus 32 ~~~~vlV~F~a~w~---~~~~~p~~~~lA~~~~~~~~~v~iakVd~~ 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASP---YGEKHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSC---CSHHHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred CCCCEEEEEECCCC---CCCCCHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 39978999807888---875489999999999735898279996154
No 187
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.84 E-value=0.56 Score=25.43 Aligned_cols=31 Identities=3% Similarity=-0.098 Sum_probs=18.8
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99679999604777654468888776555430
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQV 86 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l 86 (201)
+...++|-|.+.||+ .|-...+...++...+
T Consensus 26 ~~~~~lv~fyapwc~-~ck~~~p~~~~~~~~~ 56 (350)
T 1sji_A 26 KKYDVLCLYYHESVS-SDKVAQKQFQLKEIVL 56 (350)
T ss_dssp TTCSEEEEEEECCSC-SSSTTSHHHHHHHHHH
T ss_pred HCCCEEEEEECCCCH-HHHHHCHHHHHHHHHH
T ss_conf 559989999768984-7777476788766789
No 188
>3gyk_A 27KDA outer membrane protein; APC61738.2, thioredoxin-like, oxidoreductase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Silicibacter pomeroyi dss-3}
Probab=89.72 E-value=0.79 Score=24.55 Aligned_cols=134 Identities=11% Similarity=0.199 Sum_probs=67.4
Q ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH--HHHHCCC----------
Q ss_conf 8849967999960477765446888877655543024433305887651433333057777--7531368----------
Q gi|254780281|r 52 SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK--FVQRFSD---------- 119 (201)
Q Consensus 52 ~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~--y~~~~~~---------- 119 (201)
-+-.++++++-|.=-.|| .|-...+.+.+..++.+ ++++++..+--.......... +......
T Consensus 18 G~~~A~~~i~~f~D~~Cp-~C~~~~~~~~~~~~~~~----~v~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (175)
T 3gyk_A 18 GNPEGDVTVVEFFDYNCP-YCRRAMAEVQGLVDADP----NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALM 92 (175)
T ss_dssp ECTTCSEEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCC----CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 799999899998899986-47989999999886559----7699997364321213999999998740320367999998
Q ss_pred CEECCCCCHHHHHHHHHHCCEEEEECCCC------------CCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHH
Q ss_conf 64224589889898888609088622565------------567777525874206999858982999857898889999
Q gi|254780281|r 120 RIIGISGDPIDVMRVAKNFRIYVNNVLAE------------KSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAI 187 (201)
Q Consensus 120 ~~~~ltg~~~~i~~l~~~~~v~~~~~~~~------------~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~ 187 (201)
...+ ..+.+.+..+....++...+.... .......+-|..++++++ +|++ +++..+.+.+.
T Consensus 93 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~v~~~~~~a~~~gi~gTPt~~V---nG~~---v~g~~~~~~l~ 165 (175)
T 3gyk_A 93 GMSG-KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV---EDAL---VPGFVEQSQLQ 165 (175)
T ss_dssp TCSS-CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTEE---ECSCCCHHHHH
T ss_pred HHCC-CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCHHHHH
T ss_conf 5202-102567999999849999999998634889999999999999859832888999---9999---42999999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998514
Q gi|254780281|r 188 EKINRLITYG 197 (201)
Q Consensus 188 ~~i~~ll~~~ 197 (201)
+.|++.++++
T Consensus 166 ~~I~~~~~~~ 175 (175)
T 3gyk_A 166 DAVDRARKAA 175 (175)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHCC
T ss_conf 9999998439
No 189
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=89.47 E-value=0.45 Score=26.01 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=55.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
++.|++|.|+.+||| .|....+.|.++..++. .+.|+-|..+ +.| .+.
T Consensus 119 ~~~~VVVhfy~~~~~-~C~~l~~~l~~La~~~~----~vkF~ki~~~---~~~-----~~~------------------- 166 (217)
T 2trc_P 119 KVTTIVVNIYEDGVR-GCDALNSSLECLAAEYP----MVKFCKIRAS---NTG-----AGD------------------- 166 (217)
T ss_dssp TTCEEEEEEECTTST-THHHHHHHHHHHHTTCT----TSEEEEEEHH---HHT-----CST-------------------
T ss_pred CCCEEEEEEECCCCC-CHHHHCHHHHHHHHCCC----CCEEEEEECC---CCC-----HHH-------------------
T ss_conf 997699999899993-56562744776664178----7279998246---574-----587-------------------
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCC---CHHHHHHHHHHHHHHCCCCC
Q ss_conf 88609088622565567777525874206999858982999857898---88999999999985143349
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKD---DSDSAIEKINRLITYGNVVK 201 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~---~~~~i~~~i~~ll~~~~~~~ 201 (201)
.|++ ..-++ +++=++|.++..+-+.. +.+--..+|+.+|.+-+++.
T Consensus 167 --~~~v------------------~~lPt-l~~yk~G~~v~~~vg~~~~~g~~~~~~~lE~~L~~~g~l~ 215 (217)
T 2trc_P 167 --RFSS------------------DVLPT-LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYGLLP 215 (217)
T ss_dssp --TSCG------------------GGCSE-EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTTCSC
T ss_pred --HCCC------------------CCCCE-EEEEECCEEEEEEECCHHHCCCCCCHHHHHHHHHHCCCCC
T ss_conf --7899------------------86886-9999999998999784111466487999999999859989
No 190
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, PSI, MCSG, protein structure initiative; 2.10A {Methanosarcina mazei GO1}
Probab=89.25 E-value=1.2 Score=23.46 Aligned_cols=68 Identities=16% Similarity=0.300 Sum_probs=37.8
Q ss_pred EEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHH---HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 07982999796778849967999960477765446888877---6555430244333058876514333330577777
Q gi|254780281|r 39 VHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRL---DRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKF 113 (201)
Q Consensus 39 f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l---~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y 113 (201)
..+....-+.+....-++|+++|.|+|.||. -|..+-..- ..+.+.+. =+||.|-||-| ..|+.-+.|
T Consensus 22 V~W~~w~~eal~~Ak~~~Kpifl~ig~~~C~-wC~vm~~etf~d~eva~~lN-----~~FV~VkvDre-e~pdld~~y 92 (173)
T 3ira_A 22 VDWYPWGEEAFEKARKENKPVFLSIGYSTCH-WCHMMAHESFEDEEVAGLMN-----EAFVSIKVDRE-ERPDIDNIY 92 (173)
T ss_dssp SCCBCSSHHHHHHHHHHTCCEEEEEECTTCH-HHHHHHHHTTTCHHHHHHHH-----HHCEEEEEETT-TCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEECCCCH-HHHHHHHHHCCCHHHHHHHH-----CCCEEEEECCC-CCCHHHHHH
T ss_conf 4752888999999998699189997417677-88998887418999999997-----36089886622-080089999
No 191
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=89.22 E-value=0.27 Score=27.40 Aligned_cols=134 Identities=13% Similarity=0.127 Sum_probs=63.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH-H---------------HHCC
Q ss_conf 99679999604777654468888776555430244333058876514333330577777-5---------------3136
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKF-V---------------QRFS 118 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y-~---------------~~~~ 118 (201)
.++++++.|.--.|| .|-..-+.+..+.++.+.... +..+.+...+. +.+. .+.+ + ..++
T Consensus 21 ~a~v~Vvef~d~~Cp-~C~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (195)
T 2znm_A 21 SGKIEVLEFFGYFCV-HCHHFDPLLLKLGKALPSDAY-LRTEHVVWQPE-MLGL-ARMAAAVNLSGLKYQANPAVFKAVY 96 (195)
T ss_dssp SSSEEEEEEECTTSC-CTTSSCHHHHHHHHHSCTTEE-EEEEECCCSGG-GHHH-HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCCCCEE-EEEECCCCCCC-CHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998599999899984-258886889998752566336-89865756655-0799-9999999985202222379999999
Q ss_pred CCEECCCCCHHH-HHHHHHHCCEEEEECCCC------------CCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHH
Q ss_conf 864224589889-898888609088622565------------5677775258742069998589829998578988899
Q gi|254780281|r 119 DRIIGISGDPID-VMRVAKNFRIYVNNVLAE------------KSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDS 185 (201)
Q Consensus 119 ~~~~~ltg~~~~-i~~l~~~~~v~~~~~~~~------------~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~ 185 (201)
.....+ .+... +..++...|+-....... .......+-|.-++++++ +|+++.. ...+.+.
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~i~~~~~~a~~~gI~gTPT~iI---nGk~~v~--~~~~~~~ 170 (195)
T 2znm_A 97 EQKIRL-ENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV---GGKYRVI--FNNGFDG 170 (195)
T ss_dssp HCSSCT-TSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE---TTTEEEC--CCSHHHH
T ss_pred HHHHCC-CHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE---CCEEEEC--CCCCHHH
T ss_conf 886410-007899886676608899999988608012247999999999819984888999---8999843--8899999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999985143
Q gi|254780281|r 186 AIEKINRLITYGN 198 (201)
Q Consensus 186 i~~~i~~ll~~~~ 198 (201)
..+.|+.||++-+
T Consensus 171 ~~~~i~~li~k~~ 183 (195)
T 2znm_A 171 GVHTIKELVAKVR 183 (195)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 192
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=88.64 E-value=1.3 Score=23.20 Aligned_cols=113 Identities=9% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CCCCCCHHHHHHHHH-------------HCC-C
Q ss_conf 9967999960477765446888877655543024433305887651-433333057777753-------------136-8
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV-DPKRDTPEVMKKFVQ-------------RFS-D 119 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv-DP~rDt~e~l~~y~~-------------~~~-~ 119 (201)
.++.+++-|.=..|| .|......+....+. ...++..+.+.+ .| ++....+.... ... .
T Consensus 96 ~a~~~I~vF~D~~CP-yC~~~~~~l~~~~~~---~~v~v~~~~~~~~~~--~S~~~a~~i~ca~d~~ka~~~~~~~~~~~ 169 (241)
T 1v58_A 96 DAPVIVYVFADPFCP-YCKQFWQQARPWVDS---GKVQLRTLLVGVIKP--ESPATAAAILASKDPAKTWQQYEASGGKL 169 (241)
T ss_dssp TCSEEEEEEECTTCH-HHHHHHHHHHHHHHT---TSEEEEEEECCCSST--THHHHHHHHHHSSSHHHHHHHHHHTTTCC
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHC---CCEEEEEEECCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999899999899985-189999999999860---886999996777776--68999999996067999999998716453
Q ss_pred CEECCCC-CHHHHH------HHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 6422458-988989------888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 120 RIIGISG-DPIDVM------RVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 120 ~~~~ltg-~~~~i~------~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
...-... +.+..+ ++++.+| +.-|+++++.|++|+.... ++-.+++.+.+.|..
T Consensus 170 ~~~~~~~~~~~~~~~I~~n~~l~~~lG------------------i~GTPtiv~~~~~G~~~~i-~G~~~~~~L~~~lg~ 230 (241)
T 1v58_A 170 KLNVPANVSTEQMKVLSDNEKLMDDLG------------------ANVTPAIYYMSKENTLQQA-VGLPDQKTLNIIMGN 230 (241)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHT------------------CCSSCEEEEEETTTEEEEE-ESSCCHHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCC------------------CCCCCEEEEECCCCCEEEE-CCCCCHHHHHHHHHH
T ss_conf 433311189889999999999999819------------------9758879998699988884-299999999999998
No 193
>1cq3_A Viral chemokine inhibitor; beta sandwich, cytokine; 1.85A {Cowpox virus} SCOP: b.27.1.1 PDB: 2grk_A 2ffk_A 2fin_A
Probab=88.45 E-value=0.15 Score=28.82 Aligned_cols=43 Identities=23% Similarity=0.429 Sum_probs=29.8
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 96799996047776544688887765554302443330588765143333305
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
|-=+=+.|+||.||.+ ..+ ... .++.-|.+-|.|++||+|++.
T Consensus 76 GGGLnvsfgft~Cp~~--------~sI-se~-~ng~TV~arlsS~~Pw~~~~~ 118 (233)
T 1cq3_A 76 GGGLTMDFGFTKCPKI--------SSI-SEY-SDGNTVNARLSSVSPGQGKDS 118 (233)
T ss_dssp ETTEEEEEEEESCCCC--------CEE-EEE-EETTEEEEEEECCCTTSSSCC
T ss_pred CCCEEEEEECCCCCCE--------EEE-EEE-CCCCEEEEEEECCCCCCCCCC
T ss_conf 6857898600489852--------167-773-599879899840487778998
No 194
>3l9s_A Thiol:disulfide interchange protein DSBA; thioredoxin-fold, thiol-disulfide oxidoreductase, disulfide bond, periplasm; 1.58A {Salmonella enterica subsp} PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.22 E-value=0.31 Score=27.03 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=62.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH-H--HHH-----------CCCC
Q ss_conf 9967999960477765446888877655543024433305887651433333057777-7--531-----------3686
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK-F--VQR-----------FSDR 120 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~-y--~~~-----------~~~~ 120 (201)
.+++.++-|.--.|| .|...-+.+............++.+..+-+...+........ + ... ++..
T Consensus 20 ~~~~~vvEf~dy~Cp-~C~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 98 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCP-HCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKELTQAWAVAMALGVEDKVTVPLFEAV 98 (191)
T ss_dssp CSSSCEEEEECTTCH-HHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSSSTTHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999679999888884-0588978877666677637886699998764577058999999999998152477899998887
Q ss_pred -EECCCCCHHHHHHHHHHCCEEEEECCCC------------CCCCCCCEEEEEEEEEEEECCCCCEEEEEC--CCCC---
Q ss_conf -4224589889898888609088622565------------567777525874206999858982999857--8988---
Q gi|254780281|r 121 -IIGISGDPIDVMRVAKNFRIYVNNVLAE------------KSGVEEKYFVDHTTALLLFDTAGSIVGVIP--YKDD--- 182 (201)
Q Consensus 121 -~~~ltg~~~~i~~l~~~~~v~~~~~~~~------------~~~~~~~y~i~H~~~~~lid~~G~i~~~~~--~~~~--- 182 (201)
...-..+.+.+..++...|+-....... .......+.|+.++++++ ||+++..-. ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~v~~~~~~a~~~gi~gTPt~iI---nGky~v~~~~~~~~~~~~ 175 (191)
T 3l9s_A 99 QKTQTVQSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADLQLQGVPAMFV---NGKYQINPQGMDTSSMDV 175 (191)
T ss_dssp HTSCCCSSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE---TTTEEECGGGSCCSSHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEEEECCCCCCCHHHHH
T ss_conf 74203443778998876523899999999709889999999999999709974787999---899984676555235778
Q ss_pred -HHHHHHHHHHHHHH
Q ss_conf -89999999999851
Q gi|254780281|r 183 -SDSAIEKINRLITY 196 (201)
Q Consensus 183 -~~~i~~~i~~ll~~ 196 (201)
.+.+++.++.|+.+
T Consensus 176 ~~~~~~~~i~~L~~k 190 (191)
T 3l9s_A 176 FVQQYADTVKYLVDK 190 (191)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999817
No 195
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=86.38 E-value=0.95 Score=24.05 Aligned_cols=40 Identities=18% Similarity=0.075 Sum_probs=31.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 996799996047776544688887765554302443330588765
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFIT 99 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Is 99 (201)
++.|++|.|+-.||| .|-...+.|..+..++. .++|+-|.
T Consensus 132 ~~~~VVVhfy~~~~~-~C~~l~~~L~~LA~~~~----~vkF~ki~ 171 (245)
T 1a0r_P 132 KITTIVVHIYEDGIK-GCDALNSSLICLAAEYP----MVKFCKIK 171 (245)
T ss_dssp TTCEEEEEEECTTST-THHHHHHHHHHHHHHCT----TSEEEEEE
T ss_pred CCCEEEEEEECCCCC-CHHHHHHHHHHHHHHCC----CCEEEEEE
T ss_conf 998799997788873-46677289999998667----87499983
No 196
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans DSM12444}
Probab=85.92 E-value=1.9 Score=22.25 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=25.9
Q ss_pred EEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 87420699985898299985789888999999999985143
Q gi|254780281|r 158 VDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 158 i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
|.-++++++ +|+ .+.+..+.+.+.+.|...|++|.
T Consensus 166 i~gTPt~iI---ng~---~v~G~~~~~~l~~~I~~~l~e~~ 200 (205)
T 3gmf_A 166 VSGTPSFMI---DGI---LLAGTHDWASLRPQILARLNEGH 200 (205)
T ss_dssp CCSSSEEEE---TTE---ECTTCCSHHHHHHHHHHHHTC--
T ss_pred CCCCCEEEE---CCE---EEECCCCHHHHHHHHHHHHHCCC
T ss_conf 851788999---999---95088999999999999995788
No 197
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=81.71 E-value=2.9 Score=21.17 Aligned_cols=108 Identities=10% Similarity=0.090 Sum_probs=54.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHH-------------HHCCCCE
Q ss_conf 996799996047776544688887765554302443330588765143333305777775-------------3136864
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFV-------------QRFSDRI 121 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~-------------~~~~~~~ 121 (201)
.+|.+++.|.=..|| .|...-..+.++.+ ++..++++.+-+-..+ +....... .......
T Consensus 85 n~k~~ivvFtD~~Cp-yC~k~~~~l~~l~~----~~~~v~~~~~~~~~~~--~~~~~~~~~~~~a~d~~~a~~~~~~~~~ 157 (211)
T 1t3b_A 85 NEKHVVTVFMDITCH-YCHLLHQQLKEYND----LGITVRYLAFPRAGMN--NQTAKQMEAIWTAKDPVFALNEAEKGNL 157 (211)
T ss_dssp TCSEEEEEEECTTCH-HHHHHHTTHHHHHH----TTEEEEEEECCSSTTC--SHHHHHHHHHHHSSSHHHHHHHHHTTCC
T ss_pred CCCEEEEEEECCCCC-CHHHHHHHHHHHHH----CCCEEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988899999689882-27888888998621----4862999994487768--4678999999974569999999985567
Q ss_pred ECCCC---CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 22458---988989888860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 122 IGISG---DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 122 ~~ltg---~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
..-.. ..+.-.++++.+|+. -|+++++ .+|++ +++-.+++++.+.|++
T Consensus 158 ~~~~~~~~~v~~~~~la~~lGv~------------------GTPtiv~--~dG~~---i~G~~p~~~l~~~l~~ 208 (211)
T 1t3b_A 158 PKEVKTPNIVKKHYELGIQFGVR------------------GTPSIVT--STGEL---IGGYLKPADLLRALEE 208 (211)
T ss_dssp CSSCCCSSHHHHHHHHHHHHTCC------------------SSCEEEC--TTSCC---CCSCCCHHHHHHHHHH
T ss_pred CCCHHHCCHHHHHHHHHHHHCCC------------------CCCEEEE--CCCEE---ECCCCCHHHHHHHHHH
T ss_conf 66401111699999999995996------------------2576998--79808---4687999999999998
No 198
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, plasmid, oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp}
Probab=81.57 E-value=1.6 Score=22.62 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=25.0
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEC--CCCC----HHHHHHHHHHHHHHC
Q ss_conf 525874206999858982999857--8988----899999999998514
Q gi|254780281|r 155 KYFVDHTTALLLFDTAGSIVGVIP--YKDD----SDSAIEKINRLITYG 197 (201)
Q Consensus 155 ~y~i~H~~~~~lid~~G~i~~~~~--~~~~----~~~i~~~i~~ll~~~ 197 (201)
.+-|+.++++++ ||+++.... ...+ .+++.+.|+.||+++
T Consensus 140 ~~gI~gTPt~~I---NGky~i~~~~~~~~~~~~~~~~~~~~v~~ll~k~ 185 (189)
T 3l9v_A 140 EYGVRGTPSVYV---RGRYHINNAAFGAFSVENFRSRYAAVVRKLLAGN 185 (189)
T ss_dssp HTTCCSSSEEEE---TTTEEECGGGCCCSSHHHHHHHHHHHHHHHHCC-
T ss_pred HCCCCCCCEEEE---CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 849963567999---8998746533566578999999999999998359
No 199
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, structural genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=79.65 E-value=3.4 Score=20.75 Aligned_cols=141 Identities=11% Similarity=0.085 Sum_probs=73.7
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCH--HHHHHHHHH------------CCC--
Q ss_conf 9679999604777654468888776555430244333058876514333330--577777531------------368--
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTP--EVMKKFVQR------------FSD-- 119 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~--e~l~~y~~~------------~~~-- 119 (201)
.|+++-||.=+-|| -|=.....+.++.+.++.+ -.++.+...+.|+...+ ...++|... +..
T Consensus 6 ~k~~i~~~~D~~CP-wcy~~~~~l~~l~~~~~~~-v~i~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (216)
T 2in3_A 6 EKPVLWYIADPMCS-WCWGFAPVIENIRQEYSAF-LTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFEN 83 (216)
T ss_dssp CCCEEEEEECTTCH-HHHHHHHHHHHHHHHHTTT-CEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCTT
T ss_pred CCCEEEEEECCCCH-HHHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 89889999728897-6999999999999875997-699997556466788642599999999999999999864234121
Q ss_pred ----CEEC-----------------------------------C-CCCHHHHHHHHHHCCEEEEECCCCCCCCC------
Q ss_conf ----6422-----------------------------------4-58988989888860908862256556777------
Q gi|254780281|r 120 ----RIIG-----------------------------------I-SGDPIDVMRVAKNFRIYVNNVLAEKSGVE------ 153 (201)
Q Consensus 120 ----~~~~-----------------------------------l-tg~~~~i~~l~~~~~v~~~~~~~~~~~~~------ 153 (201)
.+.. . .++.+.+..++...|+-...+...-...+
T Consensus 84 ~~~~~~~~~s~~~~~~~~aa~~~~~~~~~~~~~~l~~a~~~~g~disd~~vL~~ia~~~Gld~~~~~~~l~s~~~~~~l~ 163 (216)
T 2in3_A 84 ALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRTL 163 (216)
T ss_dssp CSCTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHH
T ss_conf 04567888829999999999975605799999999999985211222037888877753999999999850579999999
Q ss_pred ------CCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf ------7525874206999858982999857898889999999999851433
Q gi|254780281|r 154 ------EKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 154 ------~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~~~ 199 (201)
....+.-.+ +|+|+.+|+....+.+..+++.+.+.|++++++.-+
T Consensus 164 ~~~~~a~~~gv~GvP-tfvv~~~~~~~~~~~Ga~~~~~l~~~i~~~l~~~~~ 214 (216)
T 2in3_A 164 AGFQRVAQWGISGFP-ALVVESGTDRYLITTGYRPIEALRQLLDTWLQQHGV 214 (216)
T ss_dssp HHHHHHHHTTCCSSS-EEEEEETTEEEEEESSCCCHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHCCCCCCC-EEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 989999985993288-799964981277347998999999999999985388
No 200
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=75.07 E-value=2 Score=22.07 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=29.6
Q ss_pred EEECCCCCEEEEECCC----------------CCHHHHHHHHHHHHHHCCCCC
Q ss_conf 9985898299985789----------------888999999999985143349
Q gi|254780281|r 165 LLFDTAGSIVGVIPYK----------------DDSDSAIEKINRLITYGNVVK 201 (201)
Q Consensus 165 ~lid~~G~i~~~~~~~----------------~~~~~i~~~i~~ll~~~~~~~ 201 (201)
=|+|.+|+++++-... .+.+.+.+.+++|+++|+|+|
T Consensus 179 Pl~n~~G~VIGI~t~~~~~~~~~~~~~gi~fAIP~~~v~~~l~~l~~~G~v~R 231 (237)
T 3lgi_A 179 ALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 231 (237)
T ss_dssp EEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC
T ss_pred CEECCCCEEEEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEE
T ss_conf 45868977999997985157887554555999889999999999997398994
No 201
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=72.82 E-value=3 Score=21.04 Aligned_cols=138 Identities=12% Similarity=0.139 Sum_probs=70.1
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC--HHHHHHHH--------------------
Q ss_conf 67999960477765446888877655543024433305887651433333--05777775--------------------
Q gi|254780281|r 57 KPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDT--PEVMKKFV-------------------- 114 (201)
Q Consensus 57 k~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt--~e~l~~y~-------------------- 114 (201)
++.+.+|.=+-|| -|=..-+.|+++.++++.+ -.++.+...+.|+... +...++|.
T Consensus 2 ~~ki~~~~D~~Cp-wcy~~~~~l~~l~~~~~~~-v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (208)
T 3kzq_A 2 NIKLYYVHDPMCS-WCWGYKPTIEKLKQQLPGV-IQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFW 79 (208)
T ss_dssp CEEEEEEECTTCH-HHHHHHHHHHHHHHHSCTT-SEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHH
T ss_pred EEEEEEEECCCCH-HHHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC
T ss_conf 1699999848898-6999999999999877997-5899986664644456888999999999999999999764381000
Q ss_pred -------------------HHCCCCEE------------CC-CCCHHHHHHHHHHCCEEEEECCCCCCCCC---------
Q ss_conf -------------------31368642------------24-58988989888860908862256556777---------
Q gi|254780281|r 115 -------------------QRFSDRII------------GI-SGDPIDVMRVAKNFRIYVNNVLAEKSGVE--------- 153 (201)
Q Consensus 115 -------------------~~~~~~~~------------~l-tg~~~~i~~l~~~~~v~~~~~~~~~~~~~--------- 153 (201)
+..+..+. +. .++++.+..+++..|+-...+...-...+
T Consensus 80 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~g~di~d~~~l~~ia~~~Gld~~~~~~~~~s~~~~~~l~~~~ 159 (208)
T 3kzq_A 80 KLCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQL 159 (208)
T ss_dssp HHSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 35678877899999999999679399999999999998750642178998878873999999999986169999999999
Q ss_pred ---CCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf ---75258742069998589829998578988899999999998514
Q gi|254780281|r 154 ---EKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 154 ---~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
...-+.-.++ |+++-+|.......+-.+.+.+++.|++++.+.
T Consensus 160 ~~a~~~gv~GvPt-fvv~~~~~~~~~~~g~~~~~~~~~~l~e~~~~~ 205 (208)
T 3kzq_A 160 SLAKSLGVNSYPS-LVLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp HHHHHTTCCSSSE-EEEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred HHHHHCCCCCCCE-EEEEECCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999859975887-999989988882688768999999999999972
No 202
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=70.88 E-value=1.7 Score=22.54 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=22.2
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 9996047776544688887765554302
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDRLLKQVD 87 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~~~~~l~ 87 (201)
++.|+..||| .|....+.+.++.+.+.
T Consensus 16 ~v~f~A~WCg-hCk~~kp~~~k~a~~~~ 42 (106)
T 3kp8_A 16 GTMYGAYWCP-HCQDQKELFGAAFDQVP 42 (106)
T ss_dssp CEEEECTTCH-HHHHHHHHHGGGGGGSC
T ss_pred EEEEECCCCH-HHHHHHHHHHHHHHHCC
T ss_conf 6999788588-79999999999985567
No 203
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} SCOP: c.6.2.5
Probab=68.50 E-value=5 Score=19.69 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=49.9
Q ss_pred HHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE-CCC--CCHH
Q ss_conf 5777775313686422458988989888860908862256556777752587420699985898299985-789--8889
Q gi|254780281|r 108 EVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI-PYK--DDSD 184 (201)
Q Consensus 108 e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~-~~~--~~~~ 184 (201)
+.+-+.++.+++++..+......+.+.++..|+.+......+ ..| +++|.++-.- ++. .+++
T Consensus 126 ~ai~~ai~~~~~~l~l~~~~~s~~~~~A~~~Gl~~~~E~FAD----R~Y-----------~~dG~Lv~R~~~gAvi~d~~ 190 (250)
T 2dfa_A 126 RAIALAVKAFDPGLPLVVLPGTVYEEEARKAGLRVVLEAFPE----RAY-----------LRSGQLAPRSMPGSWITDPE 190 (250)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSHHHHHHHHTTCCEEEEECTT----BCB-----------CTTSSBCCTTSTTCBCCCHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEEEEEC----CCC-----------CCCCCEEEECCCCCCCCCHH
T ss_conf 999999998599867998378478999998699668999732----668-----------89998886326522016879
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 999999999851433
Q gi|254780281|r 185 SAIEKINRLITYGNV 199 (201)
Q Consensus 185 ~i~~~i~~ll~~~~~ 199 (201)
++++...+++.+|.|
T Consensus 191 ~~~~qv~~~~~~g~V 205 (250)
T 2dfa_A 191 EAARRALRMVLEGKV 205 (250)
T ss_dssp HHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHCCCE
T ss_conf 999999999977988
No 204
>1a8y_A Calsequestrin; calcium-binding protein, sarcoplasmic reticulum, rabbit skeletal muscle; 2.40A {Oryctolagus cuniculus} SCOP: c.47.1.3 c.47.1.3 c.47.1.3
Probab=66.03 E-value=7.2 Score=18.75 Aligned_cols=18 Identities=0% Similarity=-0.086 Sum_probs=7.4
Q ss_pred CEEEEEEECCCCCCCCHHHH
Q ss_conf 67999960477765446888
Q gi|254780281|r 57 KPSIVFFGFTNCSAVCPTTL 76 (201)
Q Consensus 57 k~~li~F~~T~Cpd~Cp~~l 76 (201)
++++|.| |.+|. .|....
T Consensus 31 ~~~lV~F-yapc~-~ck~~~ 48 (367)
T 1a8y_A 31 EVLALLY-HEPPE-DDKASQ 48 (367)
T ss_dssp SEEEEEE-ECCCC-SSHHHH
T ss_pred CEEEEEE-ECCCC-CCHHHC
T ss_conf 8699999-89999-646537
No 205
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=64.84 E-value=2.8 Score=21.21 Aligned_cols=22 Identities=23% Similarity=0.696 Sum_probs=14.8
Q ss_pred CEEEEEEECCCCCCCCHHHHHHH
Q ss_conf 67999960477765446888877
Q gi|254780281|r 57 KPSIVFFGFTNCSAVCPTTLSRL 79 (201)
Q Consensus 57 k~~li~F~~T~Cpd~Cp~~l~~l 79 (201)
+-.++-|+-+||| .|...-.-|
T Consensus 21 ~~kV~iYs~~~Cp-~C~~aK~~L 42 (103)
T 3nzn_A 21 RGKVIMYGLSTCV-WCKKTKKLL 42 (103)
T ss_dssp CSCEEEEECSSCH-HHHHHHHHH
T ss_pred CCEEEEEECCCCH-HHHHHHHHH
T ss_conf 8879999389897-699999999
No 206
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=63.97 E-value=7.9 Score=18.51 Aligned_cols=133 Identities=20% Similarity=0.189 Sum_probs=58.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHH-HHHHHCCCCCCEEEEEEEEC--CCCCCHHHHH-------------HHHHH-C
Q ss_conf 996799996047776544688887765-55430244333058876514--3333305777-------------77531-3
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDR-LLKQVDPTGTLLNAYFITVD--PKRDTPEVMK-------------KFVQR-F 117 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~-~~~~l~~~~~~v~~v~IsvD--P~rDt~e~l~-------------~y~~~-~ 117 (201)
..+++++-|.=-.|| .|-..-..+.. +.+.+.+ ..++.+.++.+. +..--..... +|.+. |
T Consensus 28 ~A~v~Ivef~D~~Cp-~C~~~~~~~~~~l~~~~~~-~~~v~~~~~~~p~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~lf 105 (202)
T 3gha_A 28 DAPVTVVEFGDYKCP-SCKVFNSDIFPKIQKDFID-KGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLF 105 (202)
T ss_dssp TCSEEEEEEECTTCH-HHHHHHHHTHHHHHHHTTT-TTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999899998899987-1798999899999987412-67458874036400010499999999999871776899999999
Q ss_pred C--CCEECCCCCHHHHHHHHHHC-CEEEEECCCC--C----------CCCCCCEEEEEEEEEEEECCCCCEEEEECCCCC
Q ss_conf 6--86422458988989888860-9088622565--5----------677775258742069998589829998578988
Q gi|254780281|r 118 S--DRIIGISGDPIDVMRVAKNF-RIYVNNVLAE--K----------SGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDD 182 (201)
Q Consensus 118 ~--~~~~~ltg~~~~i~~l~~~~-~v~~~~~~~~--~----------~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~ 182 (201)
. ..|.--..+.+.+..+++.. |+-....... + ......+-|+-++++ +| +|+ .+.+..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~a~~~~gl~~~~~~~~~~~~~~~~~i~~~~~~~~~~gI~gTPt~-iI--nG~---~~~g~~~ 179 (202)
T 3gha_A 106 EKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTI-YV--NDK---VIKNFAD 179 (202)
T ss_dssp HHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEE-EE--TTE---ECSCTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCEE-EE--CCE---EECCCCC
T ss_conf 85002331101144567777653023478888720429999999999999998398016889-99--999---9469999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999985
Q gi|254780281|r 183 SDSAIEKINRLIT 195 (201)
Q Consensus 183 ~~~i~~~i~~ll~ 195 (201)
.+.+.+.|+++|.
T Consensus 180 ~~~l~~~Id~~L~ 192 (202)
T 3gha_A 180 YDEIKETIEKELK 192 (202)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986
No 207
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis wmel} PDB: 3f4r_A* 3f4t_A*
Probab=62.55 E-value=8.4 Score=18.35 Aligned_cols=139 Identities=9% Similarity=0.016 Sum_probs=66.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHH-HHHHHHHHCCCCCCEEEEEEEE--CCCCCCHHHHH-------HH---HHH-C--C
Q ss_conf 996799996047776544688887-7655543024433305887651--43333305777-------77---531-3--6
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSR-LDRLLKQVDPTGTLLNAYFITV--DPKRDTPEVMK-------KF---VQR-F--S 118 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~-l~~~~~~l~~~~~~v~~v~Isv--DP~rDt~e~l~-------~y---~~~-~--~ 118 (201)
..+++++.|.--.|| .|-.--.. ...+.+.+.+ ..++.+++..+ ++..-....+. .| .+. | .
T Consensus 38 dA~i~Ivef~Dy~Cp-~C~~f~~~v~~~l~~~~~~-~~~~~~~~~~~p~~~~s~~aa~~a~~a~~~~k~~~~~~~Lf~~q 115 (226)
T 3f4s_A 38 KAPILMIEYASLTCY-HCSLFHRNVFPKIKEKYID-TGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSI 115 (226)
T ss_dssp TCSEEEEEEECTTCH-HHHHHHHHTHHHHHHHHTT-TTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTG
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999899998899987-3798999999999998502-65289984688764669999999998740142589999999856
Q ss_pred CCEECCC-CCHHHHHHHHHHCCEEEEECCCC------------CCCC-CCCEEEEEEEEEEEECC--------CCCEEEE
Q ss_conf 8642245-89889898888609088622565------------5677-77525874206999858--------9829998
Q gi|254780281|r 119 DRIIGIS-GDPIDVMRVAKNFRIYVNNVLAE------------KSGV-EEKYFVDHTTALLLFDT--------AGSIVGV 176 (201)
Q Consensus 119 ~~~~~lt-g~~~~i~~l~~~~~v~~~~~~~~------------~~~~-~~~y~i~H~~~~~lid~--------~G~i~~~ 176 (201)
..|-.-. .+.+.+..++...|+-...+... +... ...+-|.-++++++-.. +|..
T Consensus 116 ~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~gI~gTPtfiIng~~~~~~~~~n~~~--- 192 (226)
T 3f4s_A 116 DSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVK--- 192 (226)
T ss_dssp GGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGE---
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEE---
T ss_conf 64302345305789999887005699999997699999999999999999839865898999377754545668767---
Q ss_pred ECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 5789888999999999985143
Q gi|254780281|r 177 IPYKDDSDSAIEKINRLITYGN 198 (201)
Q Consensus 177 ~~~~~~~~~i~~~i~~ll~~~~ 198 (201)
+++..+.+.+.+.|++||.++-
T Consensus 193 ~~G~~~~e~~~~~Id~ll~ka~ 214 (226)
T 3f4s_A 193 HGGYKELKYFTNVIDKLYGKAI 214 (226)
T ss_dssp EESCCCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHHH
T ss_conf 2288899999999999999867
No 208
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus, orthopox; 2.50A {Vaccinia virus}
Probab=61.07 E-value=3.5 Score=20.64 Aligned_cols=29 Identities=24% Similarity=0.584 Sum_probs=23.2
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 679999604777654468888776555430
Q gi|254780281|r 57 KPSIVFFGFTNCSAVCPTTLSRLDRLLKQV 86 (201)
Q Consensus 57 k~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l 86 (201)
|-+++-||=..|+ +|......|+++..++
T Consensus 2 K~tLILfGKPlC~-vCe~~s~~l~~LedeY 30 (124)
T 2g2q_A 2 KNVLIIFGKPYCS-ICENVSDAVEELKSEY 30 (124)
T ss_dssp CEEEEEEECTTCH-HHHHHHHHHHTTTTTE
T ss_pred CCEEEEECCCCCH-HHHHHHHHHHHHHCCC
T ss_conf 7369995796627-8998999999851535
No 209
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), chaperone; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=60.83 E-value=9 Score=18.17 Aligned_cols=43 Identities=14% Similarity=-0.005 Sum_probs=29.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
..+.++|-|..+||. .|.. +...++.+.+... .++.+--|.++
T Consensus 21 ~~~~~lV~Fya~wc~-~ck~--~~~~~~a~~~~~~-~~~~va~V~~~ 63 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPY-GEKQ--DEFKRLAENSASS-DDLLVAEVGIS 63 (240)
T ss_dssp GCSEEEEEECCSSCC-SHHH--HHHHHHHHHHTTC-TTEEEEEECCC
T ss_pred CCCCEEEEEECCCCC-HHCC--HHHHHHHHHHHCC-CCCEEEEEEEE
T ss_conf 699889999699984-1048--8999999998458-88179998753
No 210
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A
Probab=60.21 E-value=3.2 Score=20.88 Aligned_cols=23 Identities=9% Similarity=-0.013 Sum_probs=16.8
Q ss_pred CEECHHHHCCCEEEEEEECCCCCC
Q ss_conf 796778849967999960477765
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSA 70 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd 70 (201)
+.++++.|.|+|..+.. ++.|++
T Consensus 27 ~nfd~~k~~G~Wy~Ia~-a~~~~~ 49 (181)
T 2a2u_A 27 GNLDVAKLNGDWFSIVV-ASNKRE 49 (181)
T ss_dssp TCCCGGGGCEECEEEEE-ECSSGG
T ss_pred CCCCHHHHCEEEEEEEE-ECCCHH
T ss_conf 68970890987589999-628657
No 211
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii OT3} SCOP: c.6.2.5
Probab=55.20 E-value=11 Score=17.59 Aligned_cols=115 Identities=14% Similarity=0.178 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEE----EECCCCC--CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEE
Q ss_conf 4468888776555430244333058876----5143333--305777775313686422458988989888860908862
Q gi|254780281|r 71 VCPTTLSRLDRLLKQVDPTGTLLNAYFI----TVDPKRD--TPEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNN 144 (201)
Q Consensus 71 ~Cp~~l~~l~~~~~~l~~~~~~v~~v~I----svDP~rD--t~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~ 144 (201)
.+-....++..+..-....|.+++-|=- --+-.+| -.+.+-+.++.++++...+......+.+.++..|+.+..
T Consensus 83 l~~~i~~Qi~al~~~a~~~g~~l~hVKPHGALYN~~~~D~~lA~ai~~ai~~~~~~l~l~~l~~s~~~~~A~~~Gl~~~~ 162 (255)
T 1v6t_A 83 ARNYILYQVGALYAFAKAEGLELQHVKPHGALYNAMVKEEDLARAVIEGILDFDKDLILVTLSNSRVADIAEEMGLKVAH 162 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEETTCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEE
T ss_conf 99999999999999999839902442312788888862999999999999985976417535844999999973997259
Q ss_pred CCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE-CCC--CCHHHHHHHHHHHHHHCCCC
Q ss_conf 256556777752587420699985898299985-789--88899999999998514334
Q gi|254780281|r 145 VLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI-PYK--DDSDSAIEKINRLITYGNVV 200 (201)
Q Consensus 145 ~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~-~~~--~~~~~i~~~i~~ll~~~~~~ 200 (201)
....+ ..| +++|+++-.- ++. .+++++++...+++.+|.|.
T Consensus 163 E~FAD----R~Y-----------~~dG~Lv~R~~~gAvi~d~~~~~~q~~~~~~~g~V~ 206 (255)
T 1v6t_A 163 EVFAD----RAY-----------NPDGTLVPRGRPGAVIEDKEEIAERVISMVKDGGIR 206 (255)
T ss_dssp EECTT----BCB-----------CTTSCBCC-----CBCCCHHHHHHHHHHHHHHSEEE
T ss_pred EEEEC----CCC-----------CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 99750----448-----------899988636686555799999999999998679889
No 212
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreductase, blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=54.98 E-value=5.9 Score=19.29 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=25.5
Q ss_pred EECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 967788499679999604777654468888776555430
Q gi|254780281|r 48 DFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQV 86 (201)
Q Consensus 48 ~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l 86 (201)
...+.+.....-++.|+..||| .|...-+.+.++.+++
T Consensus 189 ~~~la~~l~~~g~~my~A~WC~-hC~~~k~~f~ka~~~~ 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCP-HCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCH-HHHHHHHHHGGGGGGS
T ss_pred HHHHHHHHHHCCCEEEECCCCH-HHHHHHHHHHHHHHHC
T ss_conf 8999975313283999765365-3099999999999657
No 213
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.98 E-value=3.1 Score=20.98 Aligned_cols=27 Identities=26% Similarity=0.622 Sum_probs=17.5
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 4996799996047776544688887765
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDR 81 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~ 81 (201)
++|-.-++.|..++|| .|...-.-|++
T Consensus 8 ~~~m~~V~lys~~~Cp-~C~~ak~~L~~ 34 (92)
T 3ic4_A 8 FQGMAEVLMYGLSTCP-HCKRTLEFLKR 34 (92)
T ss_dssp TTTCSSSEEEECTTCH-HHHHHHHHHHH
T ss_pred HCCCCCEEEEECCCCH-HHHHHHHHHHH
T ss_conf 1489888999889986-69999999998
No 214
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=50.28 E-value=6.6 Score=18.98 Aligned_cols=113 Identities=13% Similarity=0.227 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEE----EECCCCC--CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEEC
Q ss_conf 468888776555430244333058876----5143333--3057777753136864224589889898888609088622
Q gi|254780281|r 72 CPTTLSRLDRLLKQVDPTGTLLNAYFI----TVDPKRD--TPEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNV 145 (201)
Q Consensus 72 Cp~~l~~l~~~~~~l~~~~~~v~~v~I----svDP~rD--t~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~ 145 (201)
+-....++..+..-....|.+++-|=- --|-.+| -.+.+-+.++.+++++..+......+.+.++..|+.+...
T Consensus 79 ~~~i~~Qi~al~~~a~~~g~~l~hVKpHGALYn~a~~d~~lA~~i~~ai~~~~~~l~l~~~~~s~~~~~A~~~Gl~~~~E 158 (252)
T 1xw8_A 79 YAQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREE 158 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEETTSHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 99999999999999998499631025036999875137999999999999859415442488749999998759977999
Q ss_pred CCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC---CCHHHHHHHHHHHHHHCCC
Q ss_conf 56556777752587420699985898299985789---8889999999999851433
Q gi|254780281|r 146 LAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK---DDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 146 ~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~---~~~~~i~~~i~~ll~~~~~ 199 (201)
...+ ..| +++|.++-.-..+ .+++++++...+++.+|.|
T Consensus 159 ~FAD----R~Y-----------~~dG~LvpR~~~gAvi~d~~~~~~qv~~~~~~g~V 200 (252)
T 1xw8_A 159 VFAD----RGY-----------QADGSLVPRSQSGALIENEEQALAQTLEMVQHGRV 200 (252)
T ss_dssp ECTT----SCB-----------CTTSSBCCTTTCC-----CTTHHHHHHHHHHHSEE
T ss_pred EEEC----CCC-----------CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 9862----657-----------89999886247787548999999999999977987
No 215
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GTT; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=47.94 E-value=12 Score=17.34 Aligned_cols=39 Identities=26% Similarity=0.448 Sum_probs=21.4
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 9996047776544688887765554302443330588765143333305
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
++-|.-++|| .|...-..|.+ + + +.+..+.+|-..|..+
T Consensus 22 Vviysk~~Cp-~C~~ak~lL~~----~---g--v~~~~v~ld~~~~~~~ 60 (116)
T 2e7p_A 22 VVVFSKTYCG-YCNRVKQLLTQ----V---G--ASYKVVELDELSDGSQ 60 (116)
T ss_dssp EEEEECTTCH-HHHHHHHHHHH----H---T--CCCEEEEGGGSTTHHH
T ss_pred EEEEECCCCH-HHHHHHHHHHH----C---C--CCCEEEEEECCCCHHH
T ss_conf 8999889884-79999999996----5---9--9853898705441157
No 216
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=45.68 E-value=13 Score=17.18 Aligned_cols=43 Identities=19% Similarity=0.143 Sum_probs=27.9
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHH---HHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 9967999960477765446888877---6555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRL---DRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l---~~~~~~l~~~~~~v~~v~IsvD 101 (201)
.+++.++-|+--+|| .|-..-+.| .++.+.++ .+++++..-+.
T Consensus 112 ~~~~~VvEff~y~Cp-hC~~~e~~l~~~~~~~~~~~---~~v~~~~~~~~ 157 (197)
T 1un2_A 112 AGAPQVLEFFSFFCP-HCYQFEEVLHISDNVKKKLP---EGVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEECTTCH-HHHHHHHTSCHHHHHTTSSC---TTCCEEEEECS
T ss_pred CCCCEEEEEEECCCC-CHHHHHHHHHHHHHHHHHCC---CCEEEEEEECC
T ss_conf 999669999816993-16556277524899997689---97389998457
No 217
>3cbc_A Neutrophil gelatinase-associated lipocalin; siderocalin, NGAL, enterobactin, glycoprotein, pyrrolidone carboxylic acid, secreted; HET: DBS; 2.17A {Homo sapiens} PDB: 3hwg_A* 3hwf_A* 3hwe_A* 3cmp_A* 3i0a_A* 3hwd_A 3by0_A*
Probab=45.32 E-value=7.8 Score=18.56 Aligned_cols=22 Identities=18% Similarity=0.017 Sum_probs=16.0
Q ss_pred CEECHHHHCCCEEEEEEECCCCC
Q ss_conf 79677884996799996047776
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCS 69 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cp 69 (201)
+.|+++.|.|+|..+.. ++.|.
T Consensus 40 ~nFdl~k~~G~WY~ia~-a~~~~ 61 (198)
T 3cbc_A 40 QNFQDNQFQGKWYVVGL-AGNAI 61 (198)
T ss_dssp TTCCTTTTCEEEEEEEE-EESSC
T ss_pred CCCCHHHHCEEEEEEEE-ECCCH
T ss_conf 78886995771246688-65722
No 218
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=35.88 E-value=23 Score=15.74 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=53.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH----HH---------HC-CCC
Q ss_conf 99679999604777654468888776555430244333058876514333330577777----53---------13-686
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKF----VQ---------RF-SDR 120 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y----~~---------~~-~~~ 120 (201)
.+|.+++.|.=..|| .|......+..+.+ ++.++ ..+.+-+....+...+.. .. .+ ...
T Consensus 85 ~~k~~I~vFtDp~Cp-yCrk~~~~l~~~~~----~~~~v--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (216)
T 1eej_A 85 QEKHVITVFTDITCG-YCHKLHEQMADYNA----LGITV--RYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp TCCEEEEEEECTTCH-HHHHHHTTHHHHHH----TTEEE--EEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHH----CCCEE--EEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCC
T ss_conf 888799999899987-68989999998742----37369--999826776325779999999986531555678873566
Q ss_pred --EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf --422458988989888860908862256556777752587420699985898299985789888999999999985
Q gi|254780281|r 121 --IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLIT 195 (201)
Q Consensus 121 --~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~ 195 (201)
-.--.-..+.-..+++.+|+. -++++++ .+|+++ ++-.+++++.+.|++-..
T Consensus 158 ~~~~~~~~~i~~~~~la~~lGi~------------------GTPt~i~--~dG~~i---~G~~~~~~l~~~l~~~~k 211 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVS------------------GTPAVVL--SNGTLV---PGYQPPKEMKEFLDEHQK 211 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCC------------------SSSEEEC--TTSCEE---ESCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCC------------------CCCEEEE--CCCEEE---CCCCCHHHHHHHHHHHHH
T ss_conf 42223301799999999983997------------------4887997--199284---598999999999998656
No 219
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structure initiative, NESG, PSI; NMR {Staphylococcus epidermidis atcc 12228} SCOP: d.52.8.1
Probab=34.98 E-value=19 Score=16.20 Aligned_cols=53 Identities=15% Similarity=0.248 Sum_probs=28.7
Q ss_pred CCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH-HHHHHCCC-CCCEEEEEEE
Q ss_conf 9979677884996799996047776544688887765-55430244-3330588765
Q gi|254780281|r 45 DGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDR-LLKQVDPT-GTLLNAYFIT 99 (201)
Q Consensus 45 ~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~-~~~~l~~~-~~~v~~v~Is 99 (201)
+|..+.+.++++..+.+-|.- .|. -||.+..-+.. +.+.|.+. ....++..|.
T Consensus 26 dGGdvelv~v~~g~V~V~l~G-aC~-gCp~s~~Tlk~~Ie~~L~~~vpev~~V~~V~ 80 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHG-ACG-TCPSSTITLKAGIERALHEEVPGVIEVEQVF 80 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEES-SCC-SSCHHHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEEEE-CCC-CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 799779996239999999865-788-9862899999999999998789977899971
No 220
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=34.77 E-value=22 Score=15.81 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=10.6
Q ss_pred EEEEEEECCCCCCCCHHHHHHH
Q ss_conf 7999960477765446888877
Q gi|254780281|r 58 PSIVFFGFTNCSAVCPTTLSRL 79 (201)
Q Consensus 58 ~~li~F~~T~Cpd~Cp~~l~~l 79 (201)
..-+.|+|+|||+.||.....+
T Consensus 92 ~~~~ifi~~~ppd~a~vK~kMl 113 (164)
T 3daw_B 92 LESVVFIYSMPGYTCSIRERML 113 (164)
T ss_dssp EEEEEEEEECCSTTSCHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHH
T ss_conf 3425999992898888889999
No 221
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GTT; 1.50A {Saccharomyces cerevisiae}
Probab=33.98 E-value=24 Score=15.56 Aligned_cols=53 Identities=17% Similarity=0.306 Sum_probs=24.9
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHC
Q ss_conf 96799996047776544688887765554302443330588765143333305777775313
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRF 117 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~ 117 (201)
-.++ +-|.-++|| .|-..-..| +..+.....+ ..+.+|-..| ...+.++++..
T Consensus 13 ~spV-vIfsk~~Cp-~C~~ak~lL----~~~~~~~~~~--~vve~d~~~d-~~~~~~~l~~~ 65 (127)
T 3l4n_A 13 LSPI-IIFSKSTCS-YSKGMKELL----ENEYQFIPNY--YIIELDKHGH-GEELQEYIKLV 65 (127)
T ss_dssp SCSE-EEEECTTCH-HHHHHHHHH----HHHEEEESCC--EEEEGGGSTT-HHHHHHHHHHH
T ss_pred CCCE-EEEECCCCH-HHHHHHHHH----HHHCCCCCCE--EEEEECCCCC-HHHHHHHHHHC
T ss_conf 6989-999789884-589999999----9858987515--8999415566-69999999860
No 222
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thioredoxin reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=33.66 E-value=25 Score=15.52 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=24.1
Q ss_pred HHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 78849967999960477765446888877655
Q gi|254780281|r 51 LSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRL 82 (201)
Q Consensus 51 ~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~ 82 (201)
++.+++...+-.|.-.+|| .||.....++++
T Consensus 112 ~~~i~~~~~~~~~vs~~C~-~Cp~~v~~~~~~ 142 (521)
T 1hyu_A 112 IRDIDGDFEFETYYSLSCH-NCPDVVQALNLM 142 (521)
T ss_dssp HHHCCSCEEEEEEECTTCS-SHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEEECCCCC-CCHHHHHHHHHH
T ss_conf 9727887279999668999-977999999999
No 223
>2gx5_A GTP-sensing transcriptional pleiotropic repressor CODY; DNA-binding, nucleotide-binding, transcription regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=27.13 E-value=32 Score=14.85 Aligned_cols=10 Identities=10% Similarity=0.119 Sum_probs=5.0
Q ss_pred ECCCCCHHHH
Q ss_conf 5789888999
Q gi|254780281|r 177 IPYKDDSDSA 186 (201)
Q Consensus 177 ~~~~~~~~~i 186 (201)
+...++.+++
T Consensus 141 ~~~~F~ddDL 150 (170)
T 2gx5_A 141 LQDQFNDDDL 150 (170)
T ss_dssp SSCCCCHHHH
T ss_pred CCCCCCCCCE
T ss_conf 4899884536
No 224
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=25.83 E-value=34 Score=14.70 Aligned_cols=19 Identities=32% Similarity=0.649 Sum_probs=11.5
Q ss_pred EEEEECCCCCCCCHHHHHHH
Q ss_conf 99960477765446888877
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRL 79 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l 79 (201)
++-|.-++|| .|...-..|
T Consensus 51 VvIysk~~Cp-~C~~aK~lL 69 (146)
T 2ht9_A 51 VVIFSKTSCS-YCTMAKKLF 69 (146)
T ss_dssp EEEEECTTCH-HHHHHHHHH
T ss_pred EEEEECCCCH-HHHHHHHHH
T ss_conf 8999799896-799999999
No 225
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=24.62 E-value=36 Score=14.56 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=22.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
Q ss_conf 996799996047776544688887765554302443330588765143
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP 102 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP 102 (201)
.|++.++.|.- .+. .+......++.+.+++. .+ +.|+++|.
T Consensus 22 ~~~pl~~lf~~-~~~-~~~~~~~~l~~vAk~~k---~k--~~F~~vd~ 62 (133)
T 2djk_A 22 AGIPLAYIFAE-TAE-ERKELSDKLKPIAEAQR---GV--INFGTIDA 62 (133)
T ss_dssp TTSCEEEEECS-CSS-SHHHHHHHHHHHHHSST---TT--SEEEEECT
T ss_pred CCCCEEEEEEC-CCC-CHHHHHHHHHHHHHHHC---CC--EEEEEECH
T ss_conf 89988999957-961-09999999999999800---84--37999755
No 226
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=24.48 E-value=16 Score=16.73 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=19.2
Q ss_pred EEECC--CCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 99858--9829998578988899999999998514
Q gi|254780281|r 165 LLFDT--AGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 165 ~lid~--~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
.++|+ ++++.+.---+.+..+++..+.-.|..+
T Consensus 524 li~dk~d~~rlLGa~ivG~~A~elI~~~~~ai~~~ 558 (598)
T 2x8g_A 524 LVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMG 558 (598)
T ss_dssp EEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 99982998989999998899999999999999869
No 227
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=24.11 E-value=36 Score=14.51 Aligned_cols=80 Identities=9% Similarity=-0.027 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-C-CCCCCEEEECCCCC-EE-----------CHHHHCCCEEEEEEECC
Q ss_conf 93089999999999999986424675566766-6-66787079829997-96-----------77884996799996047
Q gi|254780281|r 1 MKALGIILGTILLAVLGSIAYVSFSSKFVDGN-R-RFNSDVHLVAQDGT-DF-----------SLSSLYIKPSIVFFGFT 66 (201)
Q Consensus 1 MK~~~i~~~~~ll~~~~~~~~~~~~~~~~~~~-~-~~~~~f~L~d~~G~-~~-----------~~~~~~Gk~~li~F~~T 66 (201)
||.-.+++.++.++++++.............. + .+. |-|.|.-|- .+ .++.|...=+...=.|+
T Consensus 1 m~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~p~NIi--~il~DD~g~~dl~~~g~~~~~TPniD~LA~~G~~Ft~~y~ 78 (375)
T 2w5v_A 1 MKLKKIVFTLIALGLFSCKTTSVLVKNEPQLKTPKNVI--LLISDGAGLSQISSTFYFKSGTPNYTQFKNIGLIKTSSSR 78 (375)
T ss_dssp -----------------------------CCCCCSEEE--EEEETTCCHHHHHHHHHHSSSCCGGGGCCEEEEEECCCSS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE--EEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 96159999999999999864034442277668998799--9985899989999863746799888899987755144355
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7765446888877655
Q gi|254780281|r 67 NCSAVCPTTLSRLDRL 82 (201)
Q Consensus 67 ~Cpd~Cp~~l~~l~~~ 82 (201)
.+|-.||...+.|..-
T Consensus 79 ~~~~~~~~r~~~l~g~ 94 (375)
T 2w5v_A 79 EDVTDSASGATAFSCG 94 (375)
T ss_dssp CSSCCHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHC
T ss_conf 8888737788999728
No 228
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=24.05 E-value=36 Score=14.50 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=23.0
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 604777654468888776555430244333058876
Q gi|254780281|r 63 FGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFI 98 (201)
Q Consensus 63 F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~I 98 (201)
|| |.|+ -|+....+.+++.++++- +..+.-|
T Consensus 7 lg-~gC~-~C~~~~~~v~~a~~e~gi---~a~v~kv 37 (77)
T 1ilo_A 7 YG-TGCA-NCQMLEKNAREAVKELGI---DAEFEKI 37 (77)
T ss_dssp EC-SSSS-TTHHHHHHHHHHHHHTTC---CEEEEEE
T ss_pred EC-CCCC-CHHHHHHHHHHHHHHCCC---CEEEEEE
T ss_conf 76-9997-569999999999996599---5599995
No 229
>3fz9_A Glutaredoxin; oxidoreductase; HET: GSH; 1.70A {Populus tremula x populus tremuloides} PDB: 3fza_A*
Probab=23.73 E-value=37 Score=14.46 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=17.0
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 999604777654468888776555430244333058876514
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
++-|.-++|| .|...-..| ++ .+ +.+..+.+|
T Consensus 20 Vvvysk~~Cp-~C~~ak~lL----~~---~~--i~~~~~~id 51 (112)
T 3fz9_A 20 VVVYSKTWCS-YSSEVKSLF----KR---LN--VDPLVVELD 51 (112)
T ss_dssp EEEEECTTCH-HHHHHHHHH----HH---TT--CCCEEEEGG
T ss_pred EEEEECCCCH-HHHHHHHHH----HH---CC--CCCEEEEEE
T ss_conf 8999899894-899999999----97---69--974699987
No 230
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens str}
Probab=23.58 E-value=37 Score=14.44 Aligned_cols=17 Identities=12% Similarity=0.042 Sum_probs=13.8
Q ss_pred EEEEEECCCCCEEEEEC
Q ss_conf 06999858982999857
Q gi|254780281|r 162 TALLLFDTAGSIVGVIP 178 (201)
Q Consensus 162 ~~~~lid~~G~i~~~~~ 178 (201)
..+|+.||+|+++.++.
T Consensus 125 ~~~~~~DPdGn~iev~a 141 (144)
T 2kjz_A 125 YTFTAADPDSHRLRVYA 141 (144)
T ss_dssp EEEEECCTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
T ss_conf 89999979999999996
No 231
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=23.22 E-value=36 Score=14.57 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=26.8
Q ss_pred EEECCCCCEEEEECCC------------CCHHHHHHHHHHHHHHCCCCC
Q ss_conf 9985898299985789------------888999999999985143349
Q gi|254780281|r 165 LLFDTAGSIVGVIPYK------------DDSDSAIEKINRLITYGNVVK 201 (201)
Q Consensus 165 ~lid~~G~i~~~~~~~------------~~~~~i~~~i~~ll~~~~~~~ 201 (201)
-|+|.+|+++++-... .+.+.+.+-+++|++.+++.|
T Consensus 186 Pl~n~~G~vVGI~~~~~~~~~~~~i~faIp~~~i~~~l~~l~~~g~v~r 234 (239)
T 1l1j_A 186 PLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVEK 234 (239)
T ss_dssp EEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC------
T ss_pred CEECCCCEEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCC
T ss_conf 4688898899999888658886666999999999999999997896836
No 232
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=22.49 E-value=39 Score=14.31 Aligned_cols=32 Identities=25% Similarity=0.548 Sum_probs=18.4
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 999604777654468888776555430244333058876514
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
+.-|.-++|| .|...-..|. +.+ +.+..|.+|
T Consensus 3 v~vYs~~~Cp-~C~~ak~~L~-------~~~--i~y~~idi~ 34 (81)
T 1h75_A 3 ITIYTRNDCV-QCHATKRAME-------NRG--FDFEMINVD 34 (81)
T ss_dssp EEEEECTTCH-HHHHHHHHHH-------HTT--CCCEEEETT
T ss_pred EEEEECCCCH-HHHHHHHHHH-------HCC--CCEEEEECC
T ss_conf 9999599996-4899999998-------458--855999999
No 233
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=22.17 E-value=40 Score=14.27 Aligned_cols=37 Identities=16% Similarity=0.412 Sum_probs=22.5
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 999604777654468888776555430244333058876514
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
++-|.-++|| .|...-..|.+..... ..+.+..+.++
T Consensus 3 vviysk~~Cp-~C~~aK~lL~~~~~~~----~~i~~~~~~~~ 39 (85)
T 1ego_A 3 TVIFGRSGCP-YCVRAKDLAEKLSNER----DDFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTST-HHHHHHHHHHHHHHHH----SSCEEEEECHH
T ss_pred EEEEECCCCH-HHHHHHHHHHHCCCCC----CEEEEEEECCC
T ss_conf 9999689997-6999999999819976----40358970156
No 234
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; structural genomics, PSI-2, protein structure initiative; 1.90A {Thermoplasma acidophilum}
Probab=20.92 E-value=37 Score=14.46 Aligned_cols=100 Identities=12% Similarity=0.191 Sum_probs=50.8
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE-EECCCCCCHHHHHHHHHHCCCCEEC----CCCCHHH
Q ss_conf 9679999604777654468888776555430244333058876-5143333305777775313686422----4589889
Q gi|254780281|r 56 IKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFI-TVDPKRDTPEVMKKFVQRFSDRIIG----ISGDPID 130 (201)
Q Consensus 56 Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~I-svDP~rDt~e~l~~y~~~~~~~~~~----ltg~~~~ 130 (201)
..++++.+|.+. ..| ..+.+.|.++|.++.++.+ ++.|- | .+.+.+.++.... ..- .+|--..
T Consensus 14 adi~iv~~Gs~~--~~~-------~eA~~~L~~~gi~~~vi~~~~~~P~-~-~~~l~~~~~~~~~-vivvE~n~~G~l~~ 81 (118)
T 3ju3_A 14 ADITFVTWGSQK--GPI-------LDVIEDLKEEGISANLLYLKMFSPF-P-TEFVKNVLSSANL-VIDVESNYTAQAAQ 81 (118)
T ss_dssp CSEEEEEEGGGH--HHH-------HHHHHHHHHTTCCEEEEEECSSCSC-C-HHHHHHHHTTCSC-CCCCCCCCCCCHHH
T ss_pred CCEEEEECCHHH--HHH-------HHHHHHHHHCCCCCCCCCCEECCCC-C-HHHHHHHHHCCCE-EEEEECCCCHHHHH
T ss_conf 999999827729--999-------9999999874997331310015768-8-8999999955796-99991997229999
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 131 VMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 131 i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
+ +...++. +..+++.++.+.+.+++++++.++++|+|
T Consensus 82 ~--l~~~~~~---------------------------~~~~~i~~~~G~p~t~e~I~~~ik~~l~e 118 (118)
T 3ju3_A 82 M--IKLYTGI---------------------------DIKNKILKYNGRHMTEDEILKSAKEILNK 118 (118)
T ss_dssp H--HHHHHCC---------------------------CCCCCCCCBTTBCCCHHHHHHHHHHHHHC
T ss_pred H--HHHHHCC---------------------------CCCCCEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 9--9998177---------------------------67865688789338999999999999675
No 235
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=20.92 E-value=39 Score=14.30 Aligned_cols=15 Identities=13% Similarity=0.054 Sum_probs=8.8
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 777654468888776
Q gi|254780281|r 66 TNCSAVCPTTLSRLD 80 (201)
Q Consensus 66 T~Cpd~Cp~~l~~l~ 80 (201)
+|||+.||...-.+-
T Consensus 87 ~w~p~~a~~k~Km~y 101 (143)
T 1cfy_A 87 TWSPDTAPVRSKMVY 101 (143)
T ss_dssp EECCTTSCHHHHHHH
T ss_pred EECCCCCCHHHHHHH
T ss_conf 988999997892227
No 236
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GTT; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=20.82 E-value=29 Score=15.13 Aligned_cols=21 Identities=10% Similarity=0.371 Sum_probs=13.6
Q ss_pred EEEEECCCCCCCCHHHHHHHHH
Q ss_conf 9996047776544688887765
Q gi|254780281|r 60 IVFFGFTNCSAVCPTTLSRLDR 81 (201)
Q Consensus 60 li~F~~T~Cpd~Cp~~l~~l~~ 81 (201)
++-|.-++|| .|...-..|.+
T Consensus 6 i~IYt~~~Cp-~C~~ak~lL~~ 26 (89)
T 3msz_A 6 VKIYTRNGCP-YCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCH-HHHHHHHHHHH
T ss_pred EEEEECCCCH-HHHHHHHHHHH
T ss_conf 9998589997-79999999997
Done!