HHsearch alignment for GI: 254780282 and conserved domain: PRK10086

>PRK10086 DNA-binding transcriptional regulator DsdC; Provisional.
Probab=100.00  E-value=0  Score=383.07  Aligned_cols=294  Identities=22%  Similarity=0.306  Sum_probs=244.2

Q ss_pred             CC-CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf             98-88899999999998276899998828997899999999999958821797699468500134332222222222101
Q gi|254780282|r    1 MS-FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLET   79 (299)
Q Consensus         1 m~-md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~   79 (299)
T Consensus        11 ~~~~~L~~L~~F~aVa~~gSft~AA~~L~vsqsaVS~~I~~LE~~LG~~Lf~R~~R~l~LT~aG~~l~~~~~~~l~~l~~   90 (311)
T PRK10086         11 LNGWQLSKLHTFEVAARHQSFALAADELSLTPSAVSHRINQLEEELGIKLFVRSHRKVELTEEGKRVFWALKSSLDTLNQ   90 (311)
T ss_pred             CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHH
T ss_conf             68587788999999998299999999978698999999999999859843897599168909999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22100122322222233321110000000001356675420001222222222222222222223456543211112234
Q gi|254780282|r   80 TQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDISMDYADCAIRLRKPIQSSSLIQRK  159 (299)
Q Consensus        80 ~~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~~~~l~~~~~Di~i~~~~~~~~~~l~~~~  159 (299)
T Consensus        91 ~~~~~~~--~~~~G~LrI~~~~~~~~~~L~p~L~~F~~~~P~i~l~l~~~~~~~dl~~~~~Dlai~~g~~-~~~~l~~~~  167 (311)
T PRK10086         91 EILDIKN--QELSGTLTVYSRPSIAQCWLVPRLADFTRRYPSISLTILTGNENINFQRAGIDLAIYFDDA-PSAQLTHHF  167 (311)
T ss_pred             HHHHHHC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCEEEEEECCC-CCCCCEEEE
T ss_conf             9999735--7867851036772799875169999999618976999996477464102675058994788-999848999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf             55543321123443211122222211000112356643---321100023566520223432121145324200135678
Q gi|254780282|r  160 LVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDL---IPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCV  236 (299)
Q Consensus       160 l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~  236 (299)
T Consensus       168 L~~~~~~~vasP~y~~~~~~~~~p~~L~~~~ll~~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aa~  246 (311)
T PRK10086        168 LMDESILPVCSPEYAERHALTNNPNNLRHCTLLHDRQAWSNDSGTDEWHSWAQHFG-VNLLPDSSGIGFDRSDLAVIAAM  246 (311)
T ss_pred             CCCCEEEEEECHHHHHHCCCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCEEECCHHHHHHHHH
T ss_conf             74662999998899975799999899861633134432246788226664775178-52036788259867899999999


Q ss_pred             HHCCEEEEEHHHHCC---CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             738423311777601---99846617766676600899934877888899999999999985066
Q gi|254780282|r  237 LGSGIALLPDYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARDWK  298 (299)
Q Consensus       237 ~g~Gia~lp~~~~~~---~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~~~  298 (299)
T Consensus       247 ~G~Gia~~p~~~v~~~l~~G~LV~~l~~~~~~~~~~~~l~~~~~~~~p~vr~Fid~L~e~~~q~e  311 (311)
T PRK10086        247 NHIGVAMGRKRLVQKRLASGELVAPFGDMEVKCHQHYYVVTLPGRQWPKIEAFIDWLKEQVAQVE  311 (311)
T ss_pred             HCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             78998963599999999789988889887788886699997899989899999999999857349