HHsearch alignment for GI: 254780282 and conserved domain: PRK10086
>PRK10086 DNA-binding transcriptional regulator DsdC; Provisional.
Probab=100.00 E-value=0 Score=383.07 Aligned_cols=294 Identities=22% Similarity=0.306 Sum_probs=244.2
Q ss_pred CC-CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf 98-88899999999998276899998828997899999999999958821797699468500134332222222222101
Q gi|254780282|r 1 MS-FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLET 79 (299)
Q Consensus 1 m~-md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~ 79 (299)
T Consensus 11 ~~~~~L~~L~~F~aVa~~gSft~AA~~L~vsqsaVS~~I~~LE~~LG~~Lf~R~~R~l~LT~aG~~l~~~~~~~l~~l~~ 90 (311)
T PRK10086 11 LNGWQLSKLHTFEVAARHQSFALAADELSLTPSAVSHRINQLEEELGIKLFVRSHRKVELTEEGKRVFWALKSSLDTLNQ 90 (311)
T ss_pred CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHH
T ss_conf 68587788999999998299999999978698999999999999859843897599168909999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100122322222233321110000000001356675420001222222222222222222223456543211112234
Q gi|254780282|r 80 TQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDISMDYADCAIRLRKPIQSSSLIQRK 159 (299)
Q Consensus 80 ~~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~~~~l~~~~~Di~i~~~~~~~~~~l~~~~ 159 (299)
T Consensus 91 ~~~~~~~--~~~~G~LrI~~~~~~~~~~L~p~L~~F~~~~P~i~l~l~~~~~~~dl~~~~~Dlai~~g~~-~~~~l~~~~ 167 (311)
T PRK10086 91 EILDIKN--QELSGTLTVYSRPSIAQCWLVPRLADFTRRYPSISLTILTGNENINFQRAGIDLAIYFDDA-PSAQLTHHF 167 (311)
T ss_pred HHHHHHC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCEEEEEECCC-CCCCCEEEE
T ss_conf 9999735--7867851036772799875169999999618976999996477464102675058994788-999848999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf 55543321123443211122222211000112356643---321100023566520223432121145324200135678
Q gi|254780282|r 160 LVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDL---IPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCV 236 (299)
Q Consensus 160 l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~ 236 (299)
T Consensus 168 L~~~~~~~vasP~y~~~~~~~~~p~~L~~~~ll~~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aa~ 246 (311)
T PRK10086 168 LMDESILPVCSPEYAERHALTNNPNNLRHCTLLHDRQAWSNDSGTDEWHSWAQHFG-VNLLPDSSGIGFDRSDLAVIAAM 246 (311)
T ss_pred CCCCEEEEEECHHHHHHCCCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCEEECCHHHHHHHHH
T ss_conf 74662999998899975799999899861633134432246788226664775178-52036788259867899999999
Q ss_pred HHCCEEEEEHHHHCC---CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 738423311777601---99846617766676600899934877888899999999999985066
Q gi|254780282|r 237 LGSGIALLPDYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARDWK 298 (299)
Q Consensus 237 ~g~Gia~lp~~~~~~---~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~~~ 298 (299)
T Consensus 247 ~G~Gia~~p~~~v~~~l~~G~LV~~l~~~~~~~~~~~~l~~~~~~~~p~vr~Fid~L~e~~~q~e 311 (311)
T PRK10086 247 NHIGVAMGRKRLVQKRLASGELVAPFGDMEVKCHQHYYVVTLPGRQWPKIEAFIDWLKEQVAQVE 311 (311)
T ss_pred HCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78998963599999999789988889887788886699997899989899999999999857349