HHsearch alignment for GI: 254780282 and conserved domain: PRK10632

>PRK10632 putative DNA-binding transcriptional regulator; Provisional.
Probab=100.00  E-value=0  Score=399.59  Aligned_cols=290  Identities=28%  Similarity=0.364  Sum_probs=258.0

Q ss_pred             CC-HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHH
Q ss_conf             88-89999999999827689999882899789999999999995882179769946850013433222222222210122
Q gi|254780282|r    3 FD-WDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLETTQ   81 (299)
Q Consensus         3 md-~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~~~   81 (299)
T Consensus         1 Md~L~~L~~F~~Vae~gSfs~AA~~L~~s~saVSr~I~~LE~~LG~~Lf~RttR~l~LT~~G~~~~~~~~~il~~~~~~~   80 (309)
T PRK10632          1 MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVH   80 (309)
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf             97678999999999809999999997959889999999999997995689789971289899999999887767888999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             10012232222223332111000000000135667542000122222222222222222222345654321111223455
Q gi|254780282|r   82 IELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDISMDYADCAIRLRKPIQSSSLIQRKLV  161 (299)
Q Consensus        82 ~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~~~~l~~~~~Di~i~~~~~~~~~~l~~~~l~  161 (299)
T Consensus        81 ~~~~~~~~~~~G~LrI~~~~~~~~~~l~~~l~~f~~~yP~i~l~l~~~~~~~dl~~~~~Diair~g~-~~~~~l~ar~L~  159 (309)
T PRK10632         81 EQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGA-LQDSSLFSRRLG  159 (309)
T ss_pred             HHHHHCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCCCEEECC-CCCCCEEEEEEE
T ss_conf             9998601787405884157177662306156788876898425776168746355505531034078-899883899914


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCE
Q ss_conf             54332112344321112222221100011235664332110002356652022343212114532420013567873842
Q gi|254780282|r  162 TIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGI  241 (299)
Q Consensus       162 ~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~Gi  241 (299)
T Consensus       160 ~~~~~l~Asp~yl~~~g~p~~p~dL~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~G~GI  236 (309)
T PRK10632        160 AMPMVVCAAKSYLAQYGTPEKPADLSSHSWLEYSVRPDNE---FELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGI  236 (309)
T ss_pred             ECCCEEEECHHHHHHCCCCCCHHHHHCCCCEEECCCCCCC---EEEECCCCCEEEECCCCEEEECCHHHHHHHHHHCCCC
T ss_conf             0450587278999846999999998389847633789984---3678589977998267709999899999999919991


Q ss_pred             EEEEHHHHCC---CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             3311777601---998466177666766008999348778888999999999999850
Q gi|254780282|r  242 ALLPDYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD  296 (299)
Q Consensus       242 a~lp~~~~~~---~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~  296 (299)
T Consensus       237 a~lP~~~v~~~l~~G~Lv~llp~~~~~~~~~~~vy~~~~~~~~rvr~fidfl~e~f~~  294 (309)
T PRK10632        237 AYVPLMWVIDEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINYLTDYFVR  294 (309)
T ss_pred             HHCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             0186999999986899689599986999719999859986489999999999999988