HHsearch alignment for GI: 254780282 and conserved domain: PRK10651
>PRK10651 transcriptional regulator NarL; Provisional.
Probab=91.93 E-value=0.64 Score=24.70 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=19.1
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCC--CCC-CCCCCCCCCC
Q ss_conf 0000135667542000122222222--222-2222222223
Q gi|254780282|r 107 LLQGNLKEFLLLYPDIQIQLILDNK--DID-ISMDYADCAI 144 (299)
Q Consensus 107 ~l~~~l~~f~~~~P~i~i~i~~~~~--~~~-l~~~~~Di~i 144 (299)
T Consensus 17 l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvl 57 (216)
T PRK10651 17 MLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 (216)
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEE
T ss_conf 99999999997589938999989999999998707999999