HHsearch alignment for GI: 254780282 and conserved domain: PRK12684
>PRK12684 transcriptional regulator CysB-like protein; Reviewed.
Probab=100.00 E-value=0 Score=392.13 Aligned_cols=288 Identities=22% Similarity=0.275 Sum_probs=252.6
Q ss_pred CCHHHHHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEE-EEECCCCCCCCCCCCCCCCCHH
Q ss_conf 8889999999999827-6899998828997899999999999958821797699468-5001343322222222221012
Q gi|254780282|r 3 FDWDKLRVFYVVARSG-SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLT-LTEQGSKLHRVTSEVYHKLETT 80 (299)
Q Consensus 3 md~~~L~~f~~v~~~g-s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~-lT~~G~~l~~~a~~~l~~~~~~ 80 (299)
T Consensus 1 MdL~qLryf~~va~~~~sft~AA~~L~iSQpavS~~I~~LE~~LG~~Lf~R~~~r~~~LT~aG~~l~~~a~~il~~~~~~ 80 (313)
T PRK12684 1 MNLHQLRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLTEPGRIILASVERILQEVENL 80 (313)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 94799999999998699999999997897789999999999985998899999998665988999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--CCC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21001223222222333211100000000013566754200012222222--222-222222222234565432111122
Q gi|254780282|r 81 QIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN--KDI-DISMDYADCAIRLRKPIQSSSLIQ 157 (299)
Q Consensus 81 ~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~--~~~-~l~~~~~Di~i~~~~~~~~~~l~~ 157 (299)
T Consensus 81 ~~~~~~~~~~~~G~l~ig~~~s~~~~~lp~~l~~f~~~~P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~~~~l~~ 160 (313)
T PRK12684 81 KRVGKDFAAQDQGNLTIATTHTQARYALPAAIAEFKKRYPKVRLSILQGSPTQIAEMVIHDQADLAIATEAIADYKELVS 160 (313)
T ss_pred HHHHHHHCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
T ss_conf 99999740677751411024555751594999999844898089997178899999997799665504357777787389
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 34555433211234432111222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r 158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237 (299)
Q Consensus 158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 237 (299)
T Consensus 161 ~~l~~~~~~~v~~~~hpla~~~~v~l~dL~~~p~I~~~~~~~~r~~----i~~~~~~~g~~p~~~~e~~~~~~i~~~V~~ 236 (313)
T PRK12684 161 LPCYQWNHAVVVPPDHPLLERKPLTLEDLAQYPLITYDDAFAGRSK----INKAFALRGLKPDIVLEAIDADVIKTYVEL 236 (313)
T ss_pred EEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHH----HHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 9803221689953898544699999999859998962899858999----999999779987479999979999999995
Q ss_pred HCCEEEEEHHHHCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 38423311777601--9984661776667660089993487788889999999999998
Q gi|254780282|r 238 GSGIALLPDYIVKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKA 294 (299)
Q Consensus 238 g~Gia~lp~~~~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~ 294 (299)
T Consensus 237 GlGi~ilP~~a~~~~~~~~L~~lp~~~~~~~~~~~v~~~k~~~ls~~~r~FIe~l~e~l 295 (313)
T PRK12684 237 GLGVGIVADMAFDPERDRNLRAIPAGHLFGSNVTRVALKQGAYLRGYVYTFIELFSPTL 295 (313)
T ss_pred CCCHHHHHHHHHCHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 98572559998467638987999784677660599999798866899999999987465