HHsearch alignment for GI: 254780282 and conserved domain: pfam00196

>pfam00196 GerE Bacterial regulatory proteins, luxR family.
Probab=92.54  E-value=0.52  Score=25.22  Aligned_cols=46  Identities=15%  Similarity=0.205  Sum_probs=42.5

Q ss_pred             CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCE
Q ss_conf             8889999999999827689999882899789999999999995882
Q gi|254780282|r    3 FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIK   48 (299)
Q Consensus         3 md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~   48 (299)
T Consensus         4 LT~RE~~il~~l~~G~s~~eIA~~L~is~~TV~~h~~~i~~Kl~v~   49 (58)
T pfam00196         4 LSPREREVLRLLAAGKSNKEIADILGISEKTVKVHRSNIMRKLNVH   49 (58)
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             7999999999998079999999997888999999999999980999