HHsearch alignment for GI: 254780282 and conserved domain: pfam00196
>pfam00196 GerE Bacterial regulatory proteins, luxR family.
Probab=92.54 E-value=0.52 Score=25.22 Aligned_cols=46 Identities=15% Similarity=0.205 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCE
Q ss_conf 8889999999999827689999882899789999999999995882
Q gi|254780282|r 3 FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIK 48 (299)
Q Consensus 3 md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~ 48 (299)
T Consensus 4 LT~RE~~il~~l~~G~s~~eIA~~L~is~~TV~~h~~~i~~Kl~v~ 49 (58)
T pfam00196 4 LSPREREVLRLLAAGKSNKEIADILGISEKTVKVHRSNIMRKLNVH 49 (58)
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf 7999999999998079999999997888999999999999980999