HHsearch alignment for GI: 254780282 and conserved domain: pfam01022

>pfam01022 HTH_5 Bacterial regulatory protein, arsR family. Members of this family contains a DNA binding 'helix-turn-helix' motif. This family includes other proteins which are not included in the Prosite definition.

Probab=95.50  E-value=0.038  Score=31.81  Aligned_cols=38  Identities=29%  Similarity=0.468  Sum_probs=29.9

Q ss_pred             HHHHHHHHH-HHCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             999999999-82768999988289978999999999999
Q gi|254780282|r    7 KLRVFYVVA-RSGSFTHAAEQLHLSQSSISRQISGLETE   44 (299)
Q Consensus         7 ~L~~f~~v~-~~gs~s~AA~~L~itq~avS~~i~~LE~~   44 (299)
T Consensus         4 Rl~Il~~L~~~~~~v~el~~~l~~sq~~vS~HL~~L~~~   42 (47)
T pfam01022         4 RLKILYLLSEGELCVCELAEILGLSQSTVSHHLKKLREA   42 (47)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             999999998089969999999895886999999999898