HHsearch alignment for GI: 254780282 and conserved domain: pfam02954

>pfam02954 HTH_8 Bacterial regulatory protein, Fis family.

Probab=92.58  E-value=0.12  Score=28.81  Aligned_cols=25  Identities=24%  Similarity=0.393  Sum_probs=22.7

Q ss_pred             HHCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             8276899998828997899999999
Q gi|254780282|r   16 RSGSFTHAAEQLHLSQSSISRQISG   40 (299)
Q Consensus        16 ~~gs~s~AA~~L~itq~avS~~i~~   40 (299)
T Consensus        17 ~~gn~~~aA~~LGisr~tL~~kmkk   41 (42)
T pfam02954        17 TGGNKSKAARLLGISRRTLYRKLKK   41 (42)
T ss_pred             HCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             4997999999979699999999973