HHsearch alignment for GI: 254780282 and conserved domain: pfam04967

>pfam04967 HTH_10 HTH DNA binding domain.
Probab=92.88  E-value=0.43  Score=25.71  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=35.1

Q ss_pred             CHHHHHHHHHHHHHC--------CHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             889999999999827--------689999882899789999999999995
Q gi|254780282|r    4 DWDKLRVFYVVARSG--------SFTHAAEQLHLSQSSISRQISGLETEV   45 (299)
Q Consensus         4 d~~~L~~f~~v~~~g--------s~s~AA~~L~itq~avS~~i~~LE~~l   45 (299)
T Consensus         2 T~rQ~evl~~A~~~GYfd~PR~~~l~elA~~lgis~sT~~~hLr~ae~ki   51 (53)
T pfam04967         2 TDRQREILRLAYKMGYFDYPRRVTLKDLAKELGISKSTLSEHLRRAESKL   51 (53)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             88999999999986897788768899999996989999999999999987