HHsearch alignment for GI: 254780282 and conserved domain: smart00529
>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element. iron dependent repressor
Probab=96.90 E-value=0.00059 Score=42.29 Aligned_cols=61 Identities=30% Similarity=0.427 Sum_probs=47.1
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-CCEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 89999882899789999999999995882179769-94685001343322222222221012210
Q gi|254780282|r 20 FTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-RGLTLTEQGSKLHRVTSEVYHKLETTQIE 83 (299)
Q Consensus 20 ~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-~~~~lT~~G~~l~~~a~~~l~~~~~~~~~ 83 (299)
T Consensus 2 ~~diA~~L~vs~~sVs~~l~~L~~~---Gli~~~~y~~i~LT~~G~~~A~~i~~rHr~le~fL~~ 63 (96)
T smart00529 2 TSEIAERLNVSPPTVTQMLKKLEKD---GLVEYEPYRGITLTEKGRRLARRLLRKHRLLERFLVD 63 (96)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHC---CCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7889988499916799999999988---8988749989788987999999999999999999999