HHsearch results for GI: 254780282 and protein with PDBid: 1b9m_A
>1b9m_A Protein (mode); DNA-binding, gene regulation, winged helix turn helix, molybdate, OB fold, transcription; 1.75A {Escherichia coli} SCOP: a.4.5.8 b.40.6.2 b.40.6.2 PDB: 1b9n_A 1o7l_A 1h9s_A 1h9r_A 1h9s_B
Probab=99.95 E-value=6e-30 Score=191.63 Aligned_cols=130 Identities=17% Similarity=0.131 Sum_probs=114.0
Q ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-----CCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 8888999999999982768999988289978999999999999588217976-----99468500134332222222222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRH-----ARGLTLTEQGSKLHRVTSEVYHK 76 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~-----~~~~~lT~~G~~l~~~a~~~l~~ 76 (299)
.+|.|+|++|.+|+++|||++||++||+||||||++|++||+.||++||+|+ ++|+.||++|+.+++++++++..
T Consensus 19 ~~d~r~l~~~~av~~~gS~t~AA~~L~iSq~avS~~I~~LE~~lG~~Lf~R~~~~l~~~G~~LT~~G~~ll~~a~~ll~~ 98 (265)
T 1b9m_A 19 FADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQI 98 (265)
T ss_dssp EECHHHHHHHHHHHHHSSHHHHHHHHTCCHHHHHHHHHHHHHHHTSCCEEECCCC-----EEECHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
T ss_conf 66979999999999979999999997989999999999998762996599753655797048708899999999999999
Q ss_pred CCHHHHHCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 101221001223222222333----2111000000000135667542000122222222
Q gi|254780282|r 77 LETTQIELQESSVKPSGKLRI----ATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK 131 (299)
Q Consensus 77 ~~~~~~~~~~~~~~~~g~i~I----~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~ 131 (299)
.+++.+.++.......|.+.+ +.........+++.+.+|...+|++.+++...+.
T Consensus 99 ~~~a~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~lp~~v~~~~~~~p~~~v~i~~~~~ 157 (265)
T 1b9m_A 99 QQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADG 157 (265)
T ss_dssp HHHHHHHHHHCCSSCTTCHHHHHHHHTEEESSSEEEEEEECCCSSSSCCSEEEEEETTS
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCC
T ss_conf 99999998655323453156654310104667774363343110268844999998799