HHsearch results for GI: 254780282 and protein with PDBid: 1i6a_A
>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=99.95 E-value=3.1e-28 Score=181.73 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=164.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222333211100000000013566754200012222222--22-2222222222234565432111122345554332
Q gi|254780282|r 90 KPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN--KD-IDISMDYADCAIRLRKPIQSSSLIQRKLVTIHMH 166 (299)
Q Consensus 90 ~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~--~~-~~l~~~~~Di~i~~~~~~~~~~l~~~~l~~~~~~ 166 (299)
..+|+||||++++++.+++|+++.+|+++||+++|++...+ .. ..+..+++|+++... +..++++...+++.++++
T Consensus 2 ~l~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~-~~~~~~~~~~~l~~~~~~ 80 (219)
T 1i6a_A 2 TMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILAL-VKESEAFIEVPLFDEPML 80 (219)
T ss_dssp TTCEEEEEEECTTTHHHHHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEEEC-CGGGTTSEEEEEEEEEEE
T ss_pred CCEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHCCC-CCCCCCCCCCCCCCCCEE
T ss_conf 9718999983777999999999999999888968999988848888887536401010235-532345323434455369
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEH
Q ss_conf 11234432111222222110001123566433211000235665202234321211453242001356787384233117
Q gi|254780282|r 167 AYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLPD 246 (299)
Q Consensus 167 ~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~Gia~lp~ 246 (299)
++++++|+...+..++++|+..+++|.+............++ ...+......+++++..+++++|.+|.|++++|.
T Consensus 81 ~v~~~~hpla~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lv~~g~gi~~lp~ 156 (219)
T 1i6a_A 81 LAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFC----FEAGADEDTHFRATSLETLRNMVAAGSGITLLPA 156 (219)
T ss_dssp EEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCS----SCTTSEEECTTTTSCHHHHHHHHHTTSCBEEEEG
T ss_pred EEEECCCHHHCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHH----HHCCCCCCEEEEECCHHHHHHHHHHCCEEEEECH
T ss_conf 999259711169998989980476898458753156777899----9738998704774899999999980998999038
Q ss_pred HHHCC---CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 77601---998466177666766008999348778888999999999999850
Q gi|254780282|r 247 YIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296 (299)
Q Consensus 247 ~~~~~---~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~ 296 (299)
+++.. +++++.+....+.+.++++++|++++..++++++|++++.++++.
T Consensus 157 ~~~~~~~~~~~l~~l~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~lr~~~~~ 209 (219)
T 1i6a_A 157 LAVPPERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDG 209 (219)
T ss_dssp GGSCSSSEETTEEEECEESSCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99975510798899988899853599999979196789999999999999987