HHsearch results for GI: 254780282 and protein with PDBid: 1r1u_A

>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=96.72  E-value=0.0028  Score=37.12  Aligned_cols=54  Identities=24%  Similarity=0.399  Sum_probs=41.3

Q ss_pred             HHHHHHHHHH-HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEE
Q ss_conf             9999999999-827689999882899789999999999995882179769946850
Q gi|254780282|r    6 DKLRVFYVVA-RSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLT   60 (299)
Q Consensus         6 ~~L~~f~~v~-~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT   60 (299)
                      ..++.+..++ ...+++.-|+.+++|||+||+|++.|++. |.--..|.|+.+.-.
T Consensus        27 ~Rl~Il~~L~~~~~~v~el~~~l~~s~s~vS~HL~~L~~a-glV~~~r~G~~~~Y~   81 (106)
T 1r1u_A           27 NRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSV-HLVKAKRQGQSMIYS   81 (106)
T ss_dssp             HHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHT-TSEEEEEETTEEEEE
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC-CCEEEEEECCEEEEE
T ss_conf             9999999998299679999998765865899999999988-934899887889999