HHsearch results for GI: 254780282 and protein with PDBid: 1s3j_A

>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=96.82  E-value=0.0012  Score=39.29  Aligned_cols=73  Identities=19%  Similarity=0.251  Sum_probs=57.5

Q ss_pred             CCCHHHHHHHHHHHHHC--CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEEEECCCCCCCCCCC
Q ss_conf             88889999999999827--689999882899789999999999995882179769-------946850013433222222
Q gi|254780282|r    2 SFDWDKLRVFYVVARSG--SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-------RGLTLTEQGSKLHRVTSE   72 (299)
Q Consensus         2 ~md~~~L~~f~~v~~~g--s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-------~~~~lT~~G~~l~~~a~~   72 (299)
                      +++..++.++..+++.|  +++.-|+.+++++|+||+.|++||+.   .|+.|..       ..+.||+.|+.+++.+..
T Consensus        34 glt~~q~~vL~~l~~~~~~t~~ela~~~~~~~~~vs~~l~~L~~~---glv~r~~~~~D~R~~~v~LT~~G~~~~~~~~~  110 (155)
T 1s3j_A           34 GVTPAQLFVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQK---NLIARTHNTKDRRVIDLSLTDEGDIKFEEVLA  110 (155)
T ss_dssp             TCCHHHHHHHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHT---TSEEEEECSSCTTSEEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH---HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf             989999999999998699799999999896998999999999862---42552023367752000248989999999999


Q ss_pred             CCCCC
Q ss_conf             22221
Q gi|254780282|r   73 VYHKL   77 (299)
Q Consensus        73 ~l~~~   77 (299)
                      .....
T Consensus       111 ~~~~~  115 (155)
T 1s3j_A          111 GRKAI  115 (155)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999