HHsearch results for GI: 254780282 and protein with PDBid: 1s3j_A
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=96.82 E-value=0.0012 Score=39.29 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=57.5
Q ss_pred CCCHHHHHHHHHHHHHC--CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEEEECCCCCCCCCCC
Q ss_conf 88889999999999827--689999882899789999999999995882179769-------946850013433222222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSG--SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-------RGLTLTEQGSKLHRVTSE 72 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~g--s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-------~~~~lT~~G~~l~~~a~~ 72 (299)
+++..++.++..+++.| +++.-|+.+++++|+||+.|++||+. .|+.|.. ..+.||+.|+.+++.+..
T Consensus 34 glt~~q~~vL~~l~~~~~~t~~ela~~~~~~~~~vs~~l~~L~~~---glv~r~~~~~D~R~~~v~LT~~G~~~~~~~~~ 110 (155)
T 1s3j_A 34 GVTPAQLFVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQK---NLIARTHNTKDRRVIDLSLTDEGDIKFEEVLA 110 (155)
T ss_dssp TCCHHHHHHHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHT---TSEEEEECSSCTTSEEEEECHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH---HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 989999999999998699799999999896998999999999862---42552023367752000248989999999999
Q ss_pred CCCCC
Q ss_conf 22221
Q gi|254780282|r 73 VYHKL 77 (299)
Q Consensus 73 ~l~~~ 77 (299)
.....
T Consensus 111 ~~~~~ 115 (155)
T 1s3j_A 111 GRKAI 115 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999