HHsearch results for GI: 254780282 and protein with PDBid: 2bv6_A

>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28

Probab=96.90  E-value=0.00067  Score=40.70  Aligned_cols=75  Identities=15%  Similarity=0.278  Sum_probs=58.2

Q ss_pred             CCCHHHHHHHHHHHHHC--CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEEEECCCCCCCCCCC
Q ss_conf             88889999999999827--689999882899789999999999995882179769-------946850013433222222
Q gi|254780282|r    2 SFDWDKLRVFYVVARSG--SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-------RGLTLTEQGSKLHRVTSE   72 (299)
Q Consensus         2 ~md~~~L~~f~~v~~~g--s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-------~~~~lT~~G~~l~~~a~~   72 (299)
                      +++..++.++..+++.|  +.+.-|+.+++++++||+.|++||+   .-|+.|.+       +.+.||+.|+.+++.+..
T Consensus        34 glt~~q~~vL~~i~~~~~~t~~~la~~l~~~~~~vs~~l~~L~~---~gli~r~~~~~DrR~~~l~LT~~G~~~~~~~~~  110 (142)
T 2bv6_A           34 NLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQ---VDLIKRERSEVDQREVFIHLTDKSETIRPELSN  110 (142)
T ss_dssp             TCCHHHHHHHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHHH---TTSEEEEECSSSTTCEEEEECHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH---CCCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf             97999999999999779989999999989798799999999998---899798337888875564478879999999999


Q ss_pred             CCCCCCH
Q ss_conf             2222101
Q gi|254780282|r   73 VYHKLET   79 (299)
Q Consensus        73 ~l~~~~~   79 (299)
                      ....+.+
T Consensus       111 ~~~~~~~  117 (142)
T 2bv6_A          111 ASDKVAS  117 (142)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999998