HHsearch results for GI: 254780282 and protein with PDBid: 2h98_A
>2h98_A HTH-type transcriptional regulator CATM; BENM, LTTR; 1.80A {Acinetobacter SP} PDB: 2h9q_A* 2f7b_A 2f7c_A* 3glb_A*
Probab=100.00 E-value=0 Score=337.04 Aligned_cols=290 Identities=18% Similarity=0.171 Sum_probs=238.5
Q ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 88899999999998276899998828997899999999999958821797699468500134332222222222101221
Q gi|254780282|r 3 FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLETTQI 82 (299)
Q Consensus 3 md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~~~~ 82 (299)
||+++|++|++++++|||++||++|++||||||++|++||++||++||+|+++|+.||++|+.|++++++++..++++.+
T Consensus 1 M~l~~L~~f~~v~~~~s~~~AA~~L~isqsavS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~i~~~~~~~~~ 80 (313)
T 2h98_A 1 MELRHLRYFVTVVEEQSISKAAEKLCIAQPPLSRQIQKLEEELGIQLFERGFRPAKVTEAGMFFYQHAVQILTHTAQASS 80 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 95799999999998299999999988888999999999999959988998899785098699998754554578998878
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012232222223332111000000000135667542000122222222---2222222222223456543211112234
Q gi|254780282|r 83 ELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK---DIDISMDYADCAIRLRKPIQSSSLIQRK 159 (299)
Q Consensus 83 ~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~---~~~l~~~~~Di~i~~~~~~~~~~l~~~~ 159 (299)
.++.. ....|.++||++++++..++++.+..|.+.||+++|++...+. ...+..|++|++|.... ...+++....
T Consensus 81 ~~~~~-~~~~~~l~i~~~~~~~~~~l~~~l~~~~~~~P~v~i~i~~~~~~~~~~~l~~~~~Di~i~~~~-~~~~~~~~~~ 158 (313)
T 2h98_A 81 MAKRI-ATVSQTLRIGYVSSLLYGLLPEIIYLFRQQNPEIHIELIECGTKDQINALKQGKIDLGFGRLK-ITDPAIRRIM 158 (313)
T ss_dssp ---------CCEEEEEECGGGGGTTHHHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHTSCSEEEESSC-CCCTTEEEEE
T ss_pred HHHHH-CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEECC-CCCCHHHHHH
T ss_conf 88752-256623999861056788999999999862993343211278278999974215551353035-6673134554
Q ss_pred CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 55543321123443211--1222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r 160 LVTIHMHAYAAPHYLKN--CREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237 (299)
Q Consensus 160 l~~~~~~~v~~~~~~~~--~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 237 (299)
++.++++++++++|+.. .+.+++++|+.+++++.+....... ...++.......+......+++++..+++++|.+
T Consensus 159 l~~~~~~~~~~~~~~l~~~~~~~i~~~~l~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (313)
T 2h98_A 159 LHKEQLKLAIHKHHHLNQFAATGVHLSQIIDEPMLLYPVSQKPN--FATFIQSLFTELGLVPSKLTEIREIQLALGLVAA 236 (313)
T ss_dssp EEEEEEEEEEETTSGGGGGTTSCBCGGGGTTSCEEECCCSSSSS--HHHHHHHHHHHTTCCCSCEEECSCHHHHHHHHHT
T ss_pred HHHHHHEEECCCCCHHHHCCCCCCCHHHHHCCCEEEEECCCCCC--CHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH
T ss_conf 33322034204776244335787588998089879841456764--1025667788638987400134989999999994
Q ss_pred HCCEEEEEHHHHCCC-CCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 384233117776019-984661776667660089993487788889999999999998506
Q gi|254780282|r 238 GSGIALLPDYIVKDN-PNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARDW 297 (299)
Q Consensus 238 g~Gia~lp~~~~~~~-~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~~ 297 (299)
|.|++++|.+++... .+++.+....+.+.++++++|+++. .++.+++|++++.+...+.
T Consensus 237 g~gi~~lP~~~~~~~~~~l~~~pl~~~~~~~~i~l~~r~~~-~~~~~~~f~~~~~e~~a~~ 296 (313)
T 2h98_A 237 GEGVCIVPASAMDIGVKNLLYIPILDDDAYSPISLAVRNMD-HSNYIPKILACVQEVFATH 296 (313)
T ss_dssp TSCBEEEEGGGGGSCCTTEEEEEBCSTTCEEEEEEEEETTC-CCTHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCC-CCHHHHHHHHHHHHHHHCC
T ss_conf 99699713889844309989998789986007999998998-8979999999999997505