HHsearch results for GI: 254780282 and protein with PDBid: 2hxr_A
>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A
Probab=100.00 E-value=1.1e-33 Score=213.37 Aligned_cols=228 Identities=19% Similarity=0.164 Sum_probs=190.3
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--CC-CCCCCCCCC
Q ss_conf 332222222222101221001223222222333211100000000013566754200012222222--22-222222222
Q gi|254780282|r 65 KLHRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN--KD-IDISMDYAD 141 (299)
Q Consensus 65 ~l~~~a~~~l~~~~~~~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~--~~-~~l~~~~~D 141 (299)
.|+++|++++.+++++...+++..+..+|+|+||++++++..++++.+.+|.++||++++++...+ .. ..+..|++|
T Consensus 2 if~~~a~~il~~~~~~~~~i~~~~~~~~g~l~Ig~~~~~~~~~l~~~l~~f~~~~P~i~l~i~~~~~~~l~~~l~~g~~D 81 (238)
T 2hxr_A 2 VWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELD 81 (238)
T ss_dssp -----------------------------CEEEEECHHHHTTTHHHHHHHHHHHCTTSCEEEEECCHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCH
T ss_conf 84999999999999999999974389842899995378999999999999999889988997328879999999869830
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 22345654321111223455543321123443211122222211000112356643321100023566520223432121
Q gi|254780282|r 142 CAIRLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRIS 221 (299)
Q Consensus 142 i~i~~~~~~~~~~l~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (299)
++|.... ...+++...++++++++++++++|+...+.+++++||.++|||.+....... .++.......+.....
T Consensus 82 ~~i~~~~-~~~~~~~~~~l~~~~~~~~~~~~hpla~~~~i~~~dL~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~ 156 (238)
T 2hxr_A 82 VGIAFAP-VHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATR----EQIDHYCEKAGLHPQV 156 (238)
T ss_dssp EEEEESS-CCCTTEEEEEEEEEEEEEEEETTSGGGGCSEECGGGGGGCEEEEECTTSHHH----HHHHHHHHHTTCCCEE
T ss_pred HHHHCCC-CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHCCCEEEECCCCCHH----HHHHHHHHHCCCCCCE
T ss_conf 0120255-4431043333455422321320046654035879998139689848998579----9999999976998752
Q ss_pred EEEECCCCHHHHHHHHHCCEEEEEHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 1453242001356787384233117776019984661776667660089993487788889999999999998506
Q gi|254780282|r 222 CLQVNSYLSIMQYCVLGSGIALLPDYIVKDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARDW 297 (299)
Q Consensus 222 ~~~~~s~~~~~~~v~~g~Gia~lp~~~~~~~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~~ 297 (299)
.+++++..+++++|.+|.|++++|.+++.+.++.+.+....+.+.++++++|++++..++++++|+|++.++++.+
T Consensus 157 ~~~~~~~~~~~~~v~~g~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~s~~~~~fi~~~~e~~~~~ 232 (238)
T 2hxr_A 157 VIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVV 232 (238)
T ss_dssp EEEESCHHHHHHHHHHSSCBEEEETHHHHHCTTEEEEEESSCSCEEEEEEEEETTSCCCHHHHHHHHHHHHHHC--
T ss_pred EECCCCHHHHHHHHHHCCEEEEEHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 1236877999999993997997029986037893399788998624999999895978999999999999998776