HHsearch results for GI: 254780282 and protein with PDBid: 2hxw_A

>2hxw_A Major antigenic peptide PEB3; periplasmic binding protein, N-glycosylation, structural genomics; HET: FLC; 1.60A {Campylobacter jejuni} PDB: 3fjm_A 3fjg_A 3fir_A* 3fj7_A*
Probab=95.32  E-value=0.017  Score=32.57  Aligned_cols=194  Identities=8%  Similarity=-0.052  Sum_probs=85.3

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC---C-------CCCCCCCCC
Q ss_conf             3332111000000000135667542000122222222--222222222222345654321---1-------112234555
Q gi|254780282|r   95 LRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK--DIDISMDYADCAIRLRKPIQS---S-------SLIQRKLVT  162 (299)
Q Consensus        95 i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~--~~~l~~~~~Di~i~~~~~~~~---~-------~l~~~~l~~  162 (299)
                      |+|....+... .+-++...|.+ .++++|++.....  .......+.|+.+........   .       .-....++.
T Consensus         3 i~v~~~~~~~~-~~~~l~~~Fek-~tGi~V~~~~~~s~~l~~~i~~~aDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (237)
T 2hxw_A            3 VNLYGPGGPHT-ALKDIANKYSE-KTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYF   80 (237)
T ss_dssp             EEEEECSSTHH-HHHHHHHHHHH-HHCCCEEEEESSHHHHHHHHHHHCSEEEESSHHHHHHHHTTSGGGCCGGGCEEEEE
T ss_pred             EEEEECCCCHH-HHHHHHHHHHH-HHCCEEEEEECCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             99994789789-99999999988-01975999977829999997659999998460478999886104677772799994


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-CCCCCCCCHHHHHHHHCCCCCC------CCCCEEEECCCCHHHH
Q ss_conf             43321123443211122222211000112356--6-4332110002356652022343------2121145324200135
Q gi|254780282|r  163 IHMHAYAAPHYLKNCREPLSIQELDKHNLITF--G-DLIPKCMEDFNWLATVDRPIGE------PRISCLQVNSYLSIMQ  233 (299)
Q Consensus       163 ~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~--~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~~  233 (299)
                      ..++++..++.+.   .+.+++||.+..+-..  . ...+.......+..........      ........++...+..
T Consensus        81 ~~~vl~~~~~~~~---~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
T 2hxw_A           81 REAIILTQKGNPL---KIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNFRNNIVAFVPNSGSARK  157 (237)
T ss_dssp             EEEEEEESTTCTT---CCCSHHHHHHSCCCEEECCCTTSSCCTTTTHHHHHHHTTCCHHHHHHHHHTEEEECCCCTTC--
T ss_pred             EEEEEEEECCCCC---CCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHHHHH
T ss_conf             3299999799976---7652356642031066513688732227999999862222088999743570586588899999


Q ss_pred             HHHHHC-CEEEEEHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             678738-423311777601998466177666766008999348778888999999999999
Q gi|254780282|r  234 YCVLGS-GIALLPDYIVKDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLK  293 (299)
Q Consensus       234 ~v~~g~-Gia~lp~~~~~~~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~  293 (299)
                      ++..|. .+++.....+...+....+.+..........+.-.++...++.++.|++||.+.
T Consensus       158 ~v~~g~~d~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~A~~Fi~fl~S~  218 (237)
T 2hxw_A          158 LFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSK  218 (237)
T ss_dssp             CTTTTTCSEEEEEHHHHHHSTTSSEEEECCTTTCCEEEEEEEECTTCCHHHHHHHHHTTSH
T ss_pred             HHHHCCCEEEEEEHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCH
T ss_conf             9970777099874454532666028996699852587799995899949999999997899