HHsearch results for GI: 254780282 and protein with PDBid: 2o1m_A
>2o1m_A Probable amino-acid ABC transporter extracellular-binding protein YTMK; NESG X-RAY O34852 YTMK_bacsu, structural genomics, PSI-2; 2.00A {Bacillus subtilis}
Probab=95.45 E-value=0.024 Score=31.68 Aligned_cols=192 Identities=11% Similarity=0.058 Sum_probs=91.5
Q ss_pred CCCCCCCCCCCCCCCCCC-----------CCCCHHHHHHHHHHCCCCCCCCC---CCCCCCCCCCCCCCCC-CCC-CCCC
Q ss_conf 222222333211100000-----------00001356675420001222222---2222222222222234-565-4321
Q gi|254780282|r 89 VKPSGKLRIATTIDLGQN-----------LLQGNLKEFLLLYPDIQIQLILD---NKDIDISMDYADCAIR-LRK-PIQS 152 (299)
Q Consensus 89 ~~~~g~i~I~~~~~~~~~-----------~l~~~l~~f~~~~P~i~i~i~~~---~~~~~l~~~~~Di~i~-~~~-~~~~ 152 (299)
....++|+||+.+.+.+. +..+++..+.++.+++++++... .....+..|++|+++. +.. +...
T Consensus 12 ~~~~~~i~V~~~~~~pP~~~~~~~g~~~G~~vDl~~~ia~~l~g~~v~~~~~~~~~~~~~l~~g~~D~i~~~~~~~~er~ 91 (258)
T 2o1m_A 12 QKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRLPHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKERE 91 (258)
T ss_dssp --CCEEEEEEECSEETTTEEECTTSCEESHHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHTTSSSEEEEEECCCHHHH
T ss_pred CCCCCEEEEEECCCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHH
T ss_conf 56699899998999798069999996887599999999987289858999789999999997799888963476787887
Q ss_pred CCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCH
Q ss_conf 1112-23455-543321123443211122222211000112356643321100023566520223432121145324200
Q gi|254780282|r 153 SSLI-QRKLV-TIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLS 230 (299)
Q Consensus 153 ~~l~-~~~l~-~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 230 (299)
..+. ..+.+ .....++..++. ....+++||.+...... .+... ...+.........+.....+.++...
T Consensus 92 ~~~~fs~~~~~~~~~~~~~~~~~----~~i~~~~dL~gk~igv~-~g~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (258)
T 2o1m_A 92 KKFLFNKVAYNHFPLKITVLQNN----DTIRGIEDLKGKRVITS-ATSNG----ALVLKKWNEDNGRPFEIAYEGQGANE 162 (258)
T ss_dssp HHCEECSSCCEEEEEEEEEETTC----CSCSSGGGCTTCEEEEC-SSSHH----HHHHHHHHHHTTCCSEEEECCSSTTH
T ss_pred HHCCCCCCCCCCCCEEEEEEECC----CCCCCHHHCCCCEEEEC-CCCHH----HHHHHHHHHHCCCCCCCEECCCCHHH
T ss_conf 53136754223554289985136----76551544579889870-78749----99999999971887420103688999
Q ss_pred HHHHHHHHCCEEEEEHH-----HHCCCC-CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 13567873842331177-----760199-84661776667660089993487788889999999999998
Q gi|254780282|r 231 IMQYCVLGSGIALLPDY-----IVKDNP-NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKA 294 (299)
Q Consensus 231 ~~~~v~~g~Gia~lp~~-----~~~~~~-~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~ 294 (299)
++.++..|.--+++... ..+..+ ....+.+ +....+++++.+++ ++.....++..+.++
T Consensus 163 ~~~~L~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~---~~~L~~~ln~~l~~~ 227 (258)
T 2o1m_A 163 TANQLKSGRADATISTPFAVDFQNKTSTIKEKTVGN--VLSNAKVYFMFNKN---EQTLSDDIDKALQEI 227 (258)
T ss_dssp HHHHHHHTSCSBEEECHHHHHHHHHHCSSCEEEEEE--EEEEEEEEEEECTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEECC--CCCCCCEEEEEECC---CHHHHHHHHHHHHHH
T ss_conf 999986595469991699999998527886588156--67775189999599---999999999999999