HHsearch results for GI: 254780282 and protein with PDBid: 2ql3_A
>2ql3_A Probable transcriptional regulator, LYSR family protein; APC7314, rhodococcus SP. RHA1, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Rhodococcus SP}
Probab=99.93 E-value=1.2e-26 Score=172.52 Aligned_cols=198 Identities=16% Similarity=0.163 Sum_probs=150.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222333211100000000013566754200012222222--2-22222222222234565432111122345554332
Q gi|254780282|r 90 KPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN--K-DIDISMDYADCAIRLRKPIQSSSLIQRKLVTIHMH 166 (299)
Q Consensus 90 ~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~--~-~~~l~~~~~Di~i~~~~~~~~~~l~~~~l~~~~~~ 166 (299)
..+|+||||++++++..++++.+.+|+++||++++++...+ . ...+..|++|++|.... ...+++...+++.++++
T Consensus 2 ~~~G~lrIg~~~~~~~~~l~~~l~~f~~~~P~v~l~i~~~~~~~l~~~l~~g~~Dl~i~~~~-~~~~~~~~~~~~~~~~~ 80 (209)
T 2ql3_A 2 HVAGPIAVGCYPALGPTILPSMLYAFTAEYPRASVEFREDTQNRLRTQLEGGELDVAIVYDL-DLSPEWQTVPLMTREPM 80 (209)
T ss_dssp -CCEEEEEEECGGGTTTTHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHTTSCSEEEEESS-SCCTTEEEEEEEEECCE
T ss_pred CCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECC-CCCCCHHEECCCCCCCC
T ss_conf 84289999968899999999999999998879389999898289998760798358853046-54200000001211222
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEE
Q ss_conf 1123443211-122222211000112356643321100023566520223432121145324200135678738423311
Q gi|254780282|r 167 AYAAPHYLKN-CREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLP 245 (299)
Q Consensus 167 ~v~~~~~~~~-~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~Gia~lp 245 (299)
++++++|+.. .+.+++++||.++|||.++.... .....+.+ ...+..+...+++++..+++++|.+|.|++++|
T Consensus 81 ~v~~~~~~la~~~~~i~~~~l~~~~~i~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lv~~g~Gi~~lp 155 (209)
T 2ql3_A 81 VVLGAEHPLAGVDGPVRLADLAEHPMVLLDAPPS-TNHAMDVC----REAGFAPRVAYRTANFETARAFVGRGLGWTLLL 155 (209)
T ss_dssp EEEETTCGGGGCCSCBCGGGGTTSCEEEECCTTH-HHHHHHHH----HHHTCCCCEEEEESCHHHHHHHHHHTSCBEEES
T ss_pred CCCCCCCHHHHCCCCCCHHHHHCCCEEECCCCCH-HHHHHHHH----HHCCCCCEEEEEECCHHHHHHHHHCCCEEEEEE
T ss_conf 2246898345179966799883398563289951-88999999----974999506998263777899998199599902
Q ss_pred HHHHCC---CCCEEEEC--CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 777601---99846617--7666766008999348778888999999999999
Q gi|254780282|r 246 DYIVKD---NPNLVRIM--EDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLK 293 (299)
Q Consensus 246 ~~~~~~---~~~lv~i~--~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~ 293 (299)
...+.. ++..+.+. ....+..+.++++|++++..++++++|+|||.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~pl~~~~~~~~~i~l~~~~~~~~s~~~~~Fi~~l~a~ 208 (209)
T 2ql3_A 156 QRPRVDVTYEGLPVVVKPIAEPKPASVAVVVAWHQEATLSRVARAFIRFVTAG 208 (209)
T ss_dssp CCCSSCBCTTSCBEEEEEBCSSCCCCEEEEEEEETTCCCCHHHHHHHHHHTC-
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 68887786479978999778888744799999919897799999999998646