HHsearch results for GI: 254780282 and protein with PDBid: 2v25_A
>2v25_A Major cell-binding factor; antigen, adhesin, aspartate, glutamate, transport, ABC transport, virulence factor, receptor; 1.49A {Campylobacter jejuni}
Probab=91.55 E-value=0.59 Score=23.61 Aligned_cols=187 Identities=11% Similarity=0.028 Sum_probs=90.1
Q ss_pred CCCCCCCCCCCCCCCC------------CCCHHHHHHHHH--HCCCCCCCCCC---CCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf 2223332111000000------------000135667542--00012222222---2222222222222345654--321
Q gi|254780282|r 92 SGKLRIATTIDLGQNL------------LQGNLKEFLLLY--PDIQIQLILDN---KDIDISMDYADCAIRLRKP--IQS 152 (299)
Q Consensus 92 ~g~i~I~~~~~~~~~~------------l~~~l~~f~~~~--P~i~i~i~~~~---~~~~l~~~~~Di~i~~~~~--~~~ 152 (299)
+|.|+||+.....+.. ..+++..+.+.. .++++++...+ ....+..|++|+++..... ...
T Consensus 37 ~~~l~V~~~~~~pP~~~~d~~~g~~~G~~~di~~~ia~~~~~~~~~v~~~~~~~~~~~~~l~~g~~d~~~~~~~~t~~r~ 116 (259)
T 2v25_A 37 KGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERK 116 (259)
T ss_dssp HTCEEEEECSEETTTEEEETTTTEEESHHHHHHHHHHHHHHSCTTSEEEEECCTTTHHHHHHTTSCSEECSSCBCCHHHH
T ss_pred CCEEEEEECCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 99899998289788324667898488898647656888727887579999833775899997699660033366897881
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHH
Q ss_conf 111-2234555433211234432111222222110001123566433211000235665202234321211453242001
Q gi|254780282|r 153 SSL-IQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSI 231 (299)
Q Consensus 153 ~~l-~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 231 (299)
..+ ...++.....++++.++. ...+++||.+.... ...+.... .++........ +......+++...+
T Consensus 117 ~~~~fs~p~~~~~~~~~~~~~~-----~i~s~~dL~g~~I~-v~~gs~~~----~~l~~~~~~~~-~~~~~~~~~s~~~~ 185 (259)
T 2v25_A 117 RIYNFSEPYYQDAIGLLVLKEK-----KYKSLADMKGANIG-VAQAATTK----KAIGEAAKKIG-IDVKFSEFPDYPSI 185 (259)
T ss_dssp TTEEECSCSEEEEEEEEEEGGG-----CCCSGGGCTTCEEE-EETTCSHH----HHHHHHHHHTT-CCCEEEEESSHHHH
T ss_pred HCEEECEEEECCCCCEEEECCC-----CCCCHHHHCCCCCC-EECCCCHH----HHHHHHHHHCC-CCEEEECCCHHHHH
T ss_conf 0114220344045430220357-----97997892698500-23477077----88999998708-84444214207888
Q ss_pred HHHHHHHCCEEEE-EHHHHCCC--CCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3567873842331-17776019--984661776667660089993487788889999999999998
Q gi|254780282|r 232 MQYCVLGSGIALL-PDYIVKDN--PNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKA 294 (299)
Q Consensus 232 ~~~v~~g~Gia~l-p~~~~~~~--~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~ 294 (299)
+.++..|.-=+++ ....+... ... ++.+. +..+.++++..+++ +|.....++.-+++.
T Consensus 186 ~~~l~~g~vDa~i~d~~~~~~~~~~~~-~i~~~-~~~~~~~~~~~~k~---~~~l~~~ln~~l~~~ 246 (259)
T 2v25_A 186 KAALDAKRVDAFSVDKSILLGYVDDKS-EILPD-SFEPQSYGIVTKKD---DPAFAKYVDDFVKEH 246 (259)
T ss_dssp HHHHHTTSSSEEEEEHHHHTTTCCTTE-EECSC-CCSEEEECCEEETT---CHHHHHHHHHHHHHT
T ss_pred HHHHHCCEEEEEECCHHHHHHHHHHCC-CCCCC-CCCCEEEEEEEECC---CHHHHHHHHHHHHHH
T ss_conf 765427837899735999999997397-43578-77732699999589---999999999999982