HHsearch results for GI: 254780282 and protein with PDBid: 3bj6_A
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, structural genomics, PSI-2; 2.01A {Silicibacter pomeroyi dss-3}
Probab=97.42 E-value=0.00017 Score=44.16 Aligned_cols=72 Identities=13% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHHC--CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEE-------CCCCEEEEECCCCCCCCCCC
Q ss_conf 88889999999999827--6899998828997899999999999958821797-------69946850013433222222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSG--SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYR-------HARGLTLTEQGSKLHRVTSE 72 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~g--s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R-------~~~~~~lT~~G~~l~~~a~~ 72 (299)
+++..++.++..+++.+ +.+.-|+.+++++|+||+.|++||+ .-|+.| ....+.||+.|+.+++.+..
T Consensus 37 glt~~q~~vL~~l~~~~~~t~~~La~~l~~~~~~is~~l~~L~~---~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~~ 113 (152)
T 3bj6_A 37 GVTVGQRAILEGLSLTPGATAPQLGAALQMKRQYISRILQEVQR---AGLIERRTNPEHARSHRYWLTPRGEAIITAIRA 113 (152)
T ss_dssp TCCHHHHHHHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHH---TTSEEEECCSSSTTSCEEEECHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH---CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97999999999999879989999999989698799999999998---899774249988984534258989999999999
Q ss_pred CCCC
Q ss_conf 2222
Q gi|254780282|r 73 VYHK 76 (299)
Q Consensus 73 ~l~~ 76 (299)
....
T Consensus 114 ~~~~ 117 (152)
T 3bj6_A 114 DEMA 117 (152)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999