HHsearch results for GI: 254780282 and protein with PDBid: 3fzv_A

>3fzv_A Probable transcriptional regulator; LYSR, structural genomics, PSI-2, protein structure initiative; 2.71A {Pseudomonas aeruginosa PA01}
Probab=100.00  E-value=0  Score=343.31  Aligned_cols=290  Identities=18%  Similarity=0.211  Sum_probs=242.3

Q ss_pred             CC-CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-CCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             98-888999999999982768999988289978999999999999588217976-9946850013433222222222210
Q gi|254780282|r    1 MS-FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRH-ARGLTLTEQGSKLHRVTSEVYHKLE   78 (299)
Q Consensus         1 m~-md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~-~~~~~lT~~G~~l~~~a~~~l~~~~   78 (299)
                      |. |||++|++|++++++|||++||+.|++||||||++|++||++||++||+|+ ++|+.||++|+.|+++++.+++.++
T Consensus         1 m~~~~l~~L~~f~~~~~~~s~s~AA~~L~isq~avS~~i~~LE~~lg~~Lf~R~~~~~~~lT~~G~~l~~~a~~il~~~~   80 (306)
T 3fzv_A            1 MASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFIRHHAQGVSLTPAGARFYRKAQELLRMAH   80 (306)
T ss_dssp             ---CCHHHHHHHHHHHHSSSHHHHHHHHTCCC-CHHHHHHHHHHHC-CCCC---------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99899999999999998299999999988888999999999999839978997899864669889864435678988889


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1221001223222222333211100000000013566754200012222222---2222222222222345654321111
Q gi|254780282|r   79 TTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN---KDIDISMDYADCAIRLRKPIQSSSL  155 (299)
Q Consensus        79 ~~~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~---~~~~l~~~~~Di~i~~~~~~~~~~l  155 (299)
                      ++.+.+........|+++||++++++..++++.+.+|.+.||+++|++...+   ...+|..+++|++|.... ...+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~P~i~l~~~~~~~~~~~~~L~~~~~Di~i~~~~-~~~~~~  159 (306)
T 3fzv_A           81 EFEQNALADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEH-DLDSTI  159 (306)
T ss_dssp             HHHHC-CCCCCCCCEEEEEEEEGGGHHHHHHHHHHHHHHHCTTEEEEEEEECHHHHHHHHHHTSCSEEEECSS-SCCTTE
T ss_pred             HHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECC-CCCCCC
T ss_conf             9999998523577752688850478999989999999853897499999787799999998599736888357-899872


Q ss_pred             CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf             223455-5433211234432111222222110001123566433211000235665202234321211453242001356
Q gi|254780282|r  156 IQRKLV-TIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQY  234 (299)
Q Consensus       156 ~~~~l~-~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  234 (299)
                      ...+++ .+.++++++++|+......++++||.++|++.+..... ......++    ...+......+++++..++.++
T Consensus       160 ~~~~l~~~~~~~v~~~~~~~l~~~~~~~~~dl~~~~~i~~~~~~~-~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~  234 (306)
T 3fzv_A          160 ETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQPS-RTYFVSLF----EELGLTPNIAFSSPSIEMVRGM  234 (306)
T ss_dssp             EEEESSCCBCCEEEEETTCTTTTSSEECHHHHTTSCEEEECCTTH-HHHHHHHH----HHTTCCCCEEEEESCHHHHHHH
T ss_pred             EEEEECCCCEEEEEECCCHHHHCCCCCCHHHHHCCCEEEECCCCC-CCHHHHHH----HHCCCCCCCCCCCCCHHHHHHH
T ss_conf             589921462689996264265337889999981799898459876-51045567----6538775425467888999999


Q ss_pred             HHHHCCEEEEEHHHHCC---CC-CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             78738423311777601---99-8466177666766008999348778888999999999999850
Q gi|254780282|r  235 CVLGSGIALLPDYIVKD---NP-NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD  296 (299)
Q Consensus       235 v~~g~Gia~lp~~~~~~---~~-~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~  296 (299)
                      |..|.|++++|...+.+   ++ .++.+....+...+++|++|++++..+|++++|+||+.+++++
T Consensus       235 v~~g~gi~~lp~~~~~~~~~~~~~l~~~~~~~~~~~~~~~li~~~~~~~~~~~~~fi~~lk~~l~~  300 (306)
T 3fzv_A          235 VGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK  300 (306)
T ss_dssp             HHTTSCBEEECCCCSCSBCTTSCBEEEEEESSCCCBCCCEEEEETTSCCCHHHHHHHHHHHHHHHC
T ss_pred             HHCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             980994999425878898756997799867788764279999989898999999999999999778