HHsearch results for GI: 254780282 and protein with PDBid: 3gxa_A
>3gxa_A Outer membrane lipoprotein GNA1946; periplasmic, L-methionine bingding, protein binding; 2.25A {Neisseria meningitidis}
Probab=90.15 E-value=0.25 Score=25.81 Aligned_cols=196 Identities=10% Similarity=0.054 Sum_probs=85.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC-CCC---CCCCCCCCCCCCCCCCCCCC-----CCCCC---C
Q ss_conf 222223332111000000000135667542000122222-222---22222222222234565432-----11112---2
Q gi|254780282|r 90 KPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLIL-DNK---DIDISMDYADCAIRLRKPIQ-----SSSLI---Q 157 (299)
Q Consensus 90 ~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~-~~~---~~~l~~~~~Di~i~~~~~~~-----~~~l~---~ 157 (299)
....+|+||++++-...++...+..+.++. ++++++.. ++. ...|..|++|+.+.-..|.- ..+.. .
T Consensus 20 ~~~~~i~ig~~~~~~~~~~~~~v~~~~k~~-Gi~Ve~v~f~d~~~~n~AL~~G~iD~n~~q~~p~l~~~~~~~g~~l~~v 98 (275)
T 3gxa_A 20 AAKKEIVFGTTVGDFGDMVKEQIQPELEKK-GYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEV 98 (275)
T ss_dssp ---CEEEEEEETTHHHHHHHHTHHHHHHTT-TCEEEEEEESSSSHHHHHHHHTSCSEEEEECHHHHHHHHHHHTCCEEEE
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCEEEEEEECCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCEEEE
T ss_conf 888528999606987999999989999965-9879999957833578998669955431445788999999779967998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-----------------CC
Q ss_conf 3455543321123443211122222211000112356643321100023566520223432-----------------12
Q gi|254780282|r 158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEP-----------------RI 220 (299)
Q Consensus 158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 220 (299)
......++.++.. ...+++|+.+-.-|...............+...+.....+ ..
T Consensus 99 ~~~~~~~~glys~--------k~ksl~dl~~G~kIaip~d~sn~~raL~~L~~~Gli~l~~~~~~~~~t~~di~~n~~~l 170 (275)
T 3gxa_A 99 FQVPTAPLGLYPG--------KLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNI 170 (275)
T ss_dssp EECCBCCCEEEES--------SCCCGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSSEECTTCCGGGCCGGGEEECTTCC
T ss_pred EEEECCCEEEEEC--------CCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHCCCCC
T ss_conf 5631155066632--------65654135899989982486368899999986695311688775545400043276564
Q ss_pred CEEEECCCCHHHHHHHHHCCEEEEEHHHHCCCC-CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH-HHHHC
Q ss_conf 114532420013567873842331177760199-84661776667660089993487788889999999999-99850
Q gi|254780282|r 221 SCLQVNSYLSIMQYCVLGSGIALLPDYIVKDNP-NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIF-LKARD 296 (299)
Q Consensus 221 ~~~~~~s~~~~~~~v~~g~Gia~lp~~~~~~~~-~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~-~~~r~ 296 (299)
...+++.... .......-.++++...+...+ .............+...++.+++...++.++.|++.+. +++++
T Consensus 171 ~~~~~~~~~l--~~~l~dvD~avi~~~~~~~agl~~~~~l~~e~~~~y~nvivvr~~~~d~~~ik~l~ea~~s~ev~~ 246 (275)
T 3gxa_A 171 KIVELEAAQL--PRSRADVDFAVVNGNYAISSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKA 246 (275)
T ss_dssp EEEEECGGGH--HHHTTTSSEEEECHHHHHHTTCCGGGCSEECCCCTTCCEEEEEGGGTTCHHHHHHHHHTTSHHHHH
T ss_pred EEEECCHHHH--HHHCCCCCEEEECCCHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHH
T ss_conf 5998566663--131267558996464687759982340002778763699998076779599999999976999999