HHsearch results for GI: 254780282 and protein with PDBid: 3oop_A

>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=97.12  E-value=0.00059  Score=41.01  Aligned_cols=75  Identities=16%  Similarity=0.133  Sum_probs=60.2

Q ss_pred             CCCHHHHHHHHHHHHHC--CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCCCCCC
Q ss_conf             88889999999999827--68999988289978999999999999588217976-------9946850013433222222
Q gi|254780282|r    2 SFDWDKLRVFYVVARSG--SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRH-------ARGLTLTEQGSKLHRVTSE   72 (299)
Q Consensus         2 ~md~~~L~~f~~v~~~g--s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~-------~~~~~lT~~G~~l~~~a~~   72 (299)
                      +++..++.++..+.+.+  +.+.=|+.+++++|+||+.|++||+.   .++.|.       ...+.+|+.|+.+++.+..
T Consensus        34 glt~~q~~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~i~~L~~~---g~v~r~~~~~D~R~~~l~LT~~G~~~~~~~~~  110 (143)
T 3oop_A           34 DVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRK---ELIVREISTEDRRISLLSLTDKGRKETTELRD  110 (143)
T ss_dssp             SSCHHHHHHHHHHHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHT---TSEEEEC----CCSCEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf             999999999999986899799999999896997999999999756---77434105899894476889899999999999


Q ss_pred             CCCCCCH
Q ss_conf             2222101
Q gi|254780282|r   73 VYHKLET   79 (299)
Q Consensus        73 ~l~~~~~   79 (299)
                      .......
T Consensus       111 ~~~~~~~  117 (143)
T 3oop_A          111 IVEASCE  117 (143)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999999