RPSBLAST alignment for GI: 254780282 and conserved domain: TIGR03339
>gnl|CDD|132382 TIGR03339, phn_lysR, aminoethylphosphonate catabolism associated LysR family transcriptional regulator. This group of sequences represents a number of related clades with numerous examples of members adjacent to operons for the degradation of 2-aminoethylphosphonate (AEP) in Pseudomonas, Ralstonia, Bordetella and Burkholderia species. These are transcriptional regulators of the LysR family which contain a helix-turn-helix (HTH) domain (pfam00126) and a periplasmic substrate-binding protein-like domain (pfam03466). Length = 279
Score = 99.4 bits (248), Expect = 9e-22
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 15/254 (5%)
Query: 7 KLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKL 66
+L+ F+ VAR GSFT AAE+L LSQ +++ Q+ LE G++LF+R+ R L LT+ G +L
Sbjct: 1 QLKAFHAVARCGSFTRAAERLGLSQPTVTDQVRKLEERYGVELFHRNGRRLELTDAGHRL 60
Query: 67 HRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQL 126
+ ++ + + L+ES G LRIA T + + F YP I++ +
Sbjct: 61 LPIVERLFQQEAEAEFLLRESGALREGSLRIAAT---APYYVLDLVARFRQRYPGIEVSV 117
Query: 127 ILDNKDIDIS--MDY-ADCAIRLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCREPLSI 183
+ N + Y D A+ L + L + A + RE +++
Sbjct: 118 RIGNSQEVLQALQSYRVDVAVSSEVV-DDPRLDRVVLGNDPLVAVVHRQHPLAERESVTL 176
Query: 184 QELDKHNLI--TFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGI 241
+EL L+ G + + E+ A V PR L++ S +I + + G G+
Sbjct: 177 EELAGQPLLMREPGSVTRQTTEEALAAAGV-----APR-PALEIGSREAIREAVLAGLGV 230
Query: 242 ALLPDYIVKDNPNL 255
+++ V +P L
Sbjct: 231 SVVSAAEVGRDPRL 244