RPSBLAST alignment for GI: 254780282 and conserved domain: PRK09906

>gnl|CDD|182137 PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional. Length = 296
 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 70/293 (23%), Positives = 114/293 (38%), Gaps = 54/293 (18%)

Query: 8   LRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLH 67
           LR F  VA   +FT AAE+LH +Q S+S+QI  LE  VG+ L  R  R + LT  G    
Sbjct: 6   LRYFVAVAEELNFTKAAEKLHTAQPSLSQQIKDLENCVGVPLLVRDKRKVALTAAG---- 61

Query: 68  RVTSEVYHKLETTQIELQESS---------VKPSGKLRIATTIDLGQNLLQGNLKEFLLL 118
               EV+  L+  +  L+++          V+   +L I        NLL   L  F L 
Sbjct: 62  ----EVF--LQDARAILEQAEKAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLR 115

Query: 119 YPDIQIQLI----------LDNKDIDISMDYADCAIRLRKPIQSSSLIQRKLVTIHMHAY 168
           +PD  I+L+          L   ++D+          +R P+ S   I    +       
Sbjct: 116 HPDTLIELVSLITTQQEEKLRRGELDVGF--------MRHPVYSDE-IDYLELLDEPLVV 166

Query: 169 AAP--HYLKNCREPLSIQELDKHNLIT----FGDLIPKCMEDFNWLATVDRPIGEPRISC 222
             P  H L +  + ++  +LD  N I+    +   +   ++ +         I       
Sbjct: 167 VLPVDHPLAHE-KEITAAQLDGVNFISTDPAYSGSLAPIIKAWFAQHNSQPNI------- 218

Query: 223 LQV-NSYLSIMQYCVLGSGIALLPDYIVKDNP-NLVRIMEDVITPSFTVYFCY 273
           +QV  + L  M    +G G  ++P Y+   N   +V        PS  +   +
Sbjct: 219 VQVATNILVTMNLVGMGLGCTIIPGYMNNFNTGQVVFRPLAGNVPSIALLMAW 271