RPSBLAST alignment of GI: 254780282 and protein with PDBid: 2qsx
>2qsx_A Putative transcriptional regulator, LYSR family; the putative transcriptional regulator, PSI-2; 1.64A {Vibrio parahaemolyticus rimd 2210633} Length = 218
Score = 73.2 bits (178), Expect = 6e-14
Identities = 27/223 (12%), Positives = 73/223 (32%), Gaps = 13/223 (5%)
Query: 77 LETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDIS 136
++ L +++ L + T L N+ +F +P+I+++++ + +
Sbjct: 4 IQHATASLIQTN-TDQELLVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGDGAVKNI 62
Query: 137 MDYADCAIRLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGD 196
+D +R P+ + + L + + K Q + + I
Sbjct: 63 HGESDLHVRCL-PLSTHYEYSQLLCEETLLLIGNTNLPKLSD----NQAISHYPFIPQTT 117
Query: 197 LIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLPDYIVKD---NP 253
+ + + + + + + G+ALLPD++ +
Sbjct: 118 ----RPQLWEQFKQENDLECPITYHSVGFEHFYLACEAVRMEKGLALLPDFMAQFSILRG 173
Query: 254 NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296
++ I + + Y P + K+ F +++ K
Sbjct: 174 DIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLTH 216