RPSBLAST alignment of GI: 254780282 and protein with PDBid: 3fxq

>3fxq_A LYSR type regulator of TSAMBCD; transcriptional regulator, LTTR, TSAR, WHTH, DNA- binding, plasmid, transcription; 1.85A {Comamonas testosteroni} PDB: 3fxr_A* 3fxu_A* 3fzj_A Length = 305
 Score =  147 bits (372), Expect = 2e-36
 Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 12/294 (4%)

Query: 4   DWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQG 63
               L+    +   GS   AA+ LHLSQ ++S  I  LE E+   L  R  RG++LT  G
Sbjct: 3   KLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFG 62

Query: 64  SKLHRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQ 123
               +    +  +    Q E+ +   +  G +  A +  +    L   L  F   +PD+ 
Sbjct: 63  QAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVT 122

Query: 124 IQLILDNKDI---DISMDYADCAI-RLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCRE 179
           + +           +     D A+    K    + L  + L    +       +      
Sbjct: 123 VNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHP--MAN 180

Query: 180 PLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGS 239
              + EL +                 N  A    P        L   S+L++        
Sbjct: 181 ATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLP---EPKLGLVCESFLALPGVVAHSD 237

Query: 240 GIALLPDYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFI 290
            +  +P  + +       L  I      P+ T+Y      L  T        +I
Sbjct: 238 LLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWI 291