RPSBLAST alignment of GI: 254780282 and protein with PDBid: 3fzv
>3fzv_A Probable transcriptional regulator; LYSR, structural genomics, PSI-2, protein structure initiative; 2.71A {Pseudomonas aeruginosa PA01} Length = 306
Score = 136 bits (343), Expect = 5e-33
Identities = 52/297 (17%), Positives = 111/297 (37%), Gaps = 13/297 (4%)
Query: 2 SFDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYR-HARGLTLT 60
S+ +L+ F GS A+ +L+++Q SIS + GLE G++LF R HA+G++LT
Sbjct: 3 SYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFIRHHAQGVSLT 62
Query: 61 EQGSKLHRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYP 120
G++ +R E+ + + +G++ I + L G + F YP
Sbjct: 63 PAGARFYRKAQELLRMAHEFEQNALADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYP 122
Query: 121 DIQIQLILDNKDI---DISMDYADCAIRLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNC 177
++I++ + ++ D A + S+ + + HA +
Sbjct: 123 GVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPLMPPQRPHALLPEGHRFAG 182
Query: 178 REPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237
+ +S+++L +I + ++ +G S +
Sbjct: 183 QAQVSLRDLCLEPMILL-----DVQPSRTYFVSLFEELGLTPNIAFSSPSIEMVRGMVGQ 237
Query: 238 GSGIALLPDYIV----KDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFI 290
G G +LL D +V + + + + + + T + F ++
Sbjct: 238 GFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYC 294