RPSBLAST alignment of GI: 254780282 and protein with PDBid: 3kos

>3kos_A HTH-type transcriptional activator AMPR; alpha-beta sandwich, DNA-binding, transcription regulation; HET: MES; 1.83A {Citrobacter freundii} PDB: 3kot_A Length = 219

 Score = 99.0 bits (246), Expect = 1e-21
 Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 12/207 (5%)

Query: 87  SSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDISMDYADCAIRL 146
           ++ +   KL+I          L   L +F   YP I + +   N  +D + +  D  IR 
Sbjct: 6   ATKQTQEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRY 65

Query: 147 RKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFN 206
                      + L +  M    +P      + P    ++ K  L+          E   
Sbjct: 66  G-GGAWHDTDAQYLCSALMSPLCSPTLASQIQTP---ADILKFPLLRSYR----RDEWAL 117

Query: 207 WLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLPDYIVKD---NPNLVRIMEDVI 263
           W+ TV      P  + +  +S +++++    G G+A+ P  +      +  +V+     I
Sbjct: 118 WMQTVGEAPPSPTHNVMVFDSSVTMLEAAQAGMGVAIAPVRMFTHLLSSERIVQPFLTQI 177

Query: 264 TPSFTVYFCYPEALKNTGKLKAFRNFI 290
               + +    ++   T  ++ F  ++
Sbjct: 178 -DLGSYWITRLQSRPETPAMREFSRWL 203