HHsearch alignment for GI: 254780283 and conserved domain: COG0654
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].
Probab=99.19 E-value=1.4e-10 Score=80.34 Aligned_cols=114 Identities=22% Similarity=0.319 Sum_probs=78.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC--C--CCCEEE-EE-------------CCCC---------------
Q ss_conf 6751999989777999999999869959999678--8--775687-50-------------1007---------------
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS--D--LGGQLM-IT-------------ESIE--------------- 50 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~--~--~GG~l~-~~-------------~~i~--------------- 50 (321)
T Consensus 1 ~~~dV~IvGaG~aGl~lA~~L~~~G~~V~liE~~~~~~~~~~r~~~l~~~~~~~L~~lG~~~~i~~~~~~~~~~~~~~~~ 80 (387)
T COG0654 1 KMLDVAIVGAGPAGLALALALARAGLDVTLLERAPRELLERGRGIALSPNALRALERLGLWDRLEALGVPPLHVMVVDDG 80 (387)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECC
T ss_conf 98549999978999999999982899689990776113557559998989999999849907776157886037999659
Q ss_pred -------CCCCCC-----CCCCHHHHHHHHHHHHHHCC-CCCCCE-EEEECCCCCCCCCCCCC-CCCCCCCCEECCCCCC
Q ss_conf -------877477-----77897899986643232002-322211-33201122222222222-2222210000147766
Q gi|254780283|r 51 -------NYPGFA-----TSIRGDWLMEQMRQQAENFG-TKIIQD-LVVSVDLDRHPFLVETQ-SGDLWHADAVVIATGS 115 (321)
Q Consensus 51 -------n~~g~~-----~~~~~~~l~~~~~~~~~~~~-v~~~~~-~V~~i~~~~~~~~v~~~-~g~~~~a~~lIiAtG~ 115 (321)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~l~~~~~v~~~~~~~~~v~v~l~~dG~~~~a~llVgADG~ 160 (387)
T COG0654 81 GRRLLIFDAAELGRGALGYVVPRSDLLNALLEAARALPNVTLRFGAEVEAVEQDGDGVTVTLSFDGETLDADLLVGADGA 160 (387)
T ss_pred CCEEEEECHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEEEEECCCEEEECCEEEECCCC
T ss_conf 96389815221687762799888999999999987189829995777999885397379999039919975999988998
Q ss_pred CC
Q ss_conf 42
Q gi|254780283|r 116 EV 117 (321)
Q Consensus 116 ~~ 117 (321)
T Consensus 161 ~S 162 (387)
T COG0654 161 NS 162 (387)
T ss_pred CH
T ss_conf 76