HHsearch alignment for GI: 254780283 and conserved domain: COG0771

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane].

Probab=92.77  E-value=0.044  Score=30.76  Aligned_cols=83  Identities=20%  Similarity=0.298  Sum_probs=0.0

Q ss_pred             CCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf             12210000102556543101210133322234434332211112112235544332222311211486433344444333
Q gi|254780283|r  144 YKNKDVIVVGGGNTAAEEALHLAKIARRVTIVHRRSSLRSEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPLFPSVSG  223 (321)
Q Consensus       144 ~~~k~v~ViGgG~~g~e~A~~L~~~~~~Vtli~r~~~l~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~~~~~  223 (321)
T Consensus         5 ~~~~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~---~~~~~~~~~~~~~~i~~~~g~~~~~----------------   65 (448)
T COG0771           5 FQGKKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRP---APEGLAAQPLLLEGIEVELGSHDDE----------------   65 (448)
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCC---CCCCHHHHHHHCCCCEEECCCCCHH----------------
T ss_conf             059979999266510999999997798699983898---7653234444203722313764110----------------


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             142032100000112222111232235656774
Q gi|254780283|r  224 VRLHNKKEGNFFERNVDGIFIAIGYKPNTKIFR  256 (321)
Q Consensus       224 v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~~~  256 (321)
T Consensus        66 -----------~~~~~d~vV~SPGi~~~~p~v~   87 (448)
T COG0771          66 -----------DLAEFDLVVKSPGIPPTHPLVE   87 (448)
T ss_pred             -----------CCCCCCEEEECCCCCCCCHHHH
T ss_conf             -----------0134778998999999888999