HHsearch alignment for GI: 254780283 and conserved domain: COG3486
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].
Probab=99.68 E-value=8.9e-16 Score=110.69 Aligned_cols=302 Identities=19% Similarity=0.219 Sum_probs=169.2
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCC----CCCEEEEECCCC--------------------CCC--
Q ss_conf 9876751999989777999999999869-9599996788----775687501007--------------------877--
Q gi|254780283|r 1 MASHDSKILIIGSGPAGYTAAIYAARAM-LKPVIIAGSD----LGGQLMITESIE--------------------NYP-- 53 (321)
Q Consensus 1 M~~~~~dVvIIG~GpAGl~aA~~l~r~g-~~v~iie~~~----~GG~l~~~~~i~--------------------n~~-- 53 (321)
T Consensus 1 ~~~~~~DliGIG~GPfNL~LA~ll~e~~~~~~lFLerkp~F~WHpGmllegstlQv~FlkDLVTl~~PTs~ySFLNYL~~ 80 (436)
T COG3486 1 MMAEVLDLIGIGIGPFNLSLAALLEEHSGLKSLFLERKPDFSWHPGMLLEGSTLQVPFLKDLVTLVDPTSPYSFLNYLHE 80 (436)
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 98764026887048327899987350257525787347888767875557864445005632553589983079999987
Q ss_pred -----CC----CCCCCHHHHHHHHHHHHHHCCCCCCCE-EEE---ECCCCCC-CCCCCCCCCCCCCCCEECCCCCCCCEE
Q ss_conf -----47----777897899986643232002322211-332---0112222-222222222222100001477664202
Q gi|254780283|r 54 -----GF----ATSIRGDWLMEQMRQQAENFGTKIIQD-LVV---SVDLDRH-PFLVETQSGDLWHADAVVIATGSEVKW 119 (321)
Q Consensus 54 -----g~----~~~~~~~~l~~~~~~~~~~~~v~~~~~-~V~---~i~~~~~-~~~v~~~~g~~~~a~~lIiAtG~~~~~ 119 (321)
T Consensus 81 h~RLy~Fl~~e~f~i~R~Ey~dY~~Waa~~l-~~~rfg~~V~~i~~~~~d~~~~~~~~t~~~~~y~ar~lVlg~G~~P~I 159 (436)
T COG3486 81 HGRLYEFLNYETFHIPRREYNDYCQWAASQL-PSLRFGEEVTDISSLDGDAVVRLFVVTANGTVYRARNLVLGVGTQPYI 159 (436)
T ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHC-CCCCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 0657655420023555888999999998408-723368701221024776305899982788478860379825997678
Q ss_pred EE----ECCCCCCCEEECCCCCCC-CCCCCCCCC-EEEEECCCCCCCCEEEEEC----CCCCCCCCCCCCCCCCCCC---
Q ss_conf 46----527743320210121111-111112210-0001025565431012101----3332223443433221111---
Q gi|254780283|r 120 LR----LESEKKFQGFGVSACATC-DGFFYKNKD-VIVVGGGNTAAEEALHLAK----IARRVTIVHRRSSLRSEKI--- 186 (321)
Q Consensus 120 ~~----ipG~~~~~~~~v~~~~~~-d~~~~~~k~-v~ViGgG~~g~e~A~~L~~----~~~~Vtli~r~~~l~~~~~--- 186 (321)
T Consensus 160 P~~f~~l~~~~v-----fHss~~~~~~~~~~~~~~V~ViG~GQSAAEi~~~Ll~~~~~~~~~l~witR~~gf~p~d~Skf 234 (436)
T COG3486 160 PPCFRSLIGERV-----FHSSEYLERHPELLQKRSVTVIGSGQSAAEIFLDLLNSQPPQDYQLNWITRSSGFLPMDYSKF 234 (436)
T ss_pred CHHHHCCCCCCE-----EEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHH
T ss_conf 767737575332-----524889876078654762899847823999999997277875731001113677772433413
Q ss_pred --------CC-----------CCCC-----------------------------CCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf --------21-----------1223-----------------------------55443322223112114864333444
Q gi|254780283|r 187 --------LQ-----------EKLF-----------------------------LQSNIDFLFDTEVVDVIGSIPEPPLF 218 (321)
Q Consensus 187 --------~~-----------~~~~-----------------------------~~~~i~~~~~~~v~~i~g~~~~~~~~ 218 (321)
T Consensus 235 ~~e~F~P~y~dyfy~l~~~~r~~ll~~~~~~YkgI~~~ti~~Iy~~lY~~~l~~~~~~v~l~~~~ev~~~~~~G~----- 309 (436)
T COG3486 235 GLEYFSPEYTDYFYGLPPEARDELLRKQRLLYKGISFDTIEEIYDLLYEQSLGGRKPDVRLLSLSEVQSVEPAGD----- 309 (436)
T ss_pred HHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCC-----
T ss_conf 454428103778843998999988761175323458889999999999987358887700013552135552789-----
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCH-HHH---HCCCCEECCCCEEEECCCC-CC--CCC-CEEEECCCCC-
Q ss_conf 4433314203210000011222211123223565-677---4256180699799008885-54--789-8289701268-
Q gi|254780283|r 219 PSVSGVRLHNKKEGNFFERNVDGIFIAIGYKPNT-KIF---RHQLKMTNTNYIWTMPDST-AT--SIP-GIFAAGDVAD- 289 (321)
Q Consensus 219 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~-~~~---~~~~~~~~~g~i~~~~~~~-~T--s~p-~Iya~GDv~~- 289 (321)
T Consensus 310 -g~~~l~~~~~~~~~~~t~~~D~vIlATGY~~~~P~fL~~l~d~l~~d~~g~l~I~~dY~v~~~~~~~~~ifvqn~e~ht 388 (436)
T COG3486 310 -GRYRLTLRHHETGELETVETDAVILATGYRRAVPSFLEGLADRLQWDDDGRLVIGRDYRVLWDGPGKGRIFVQNAELHT 388 (436)
T ss_pred -CEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCCCEEEEECCCCCC
T ss_conf -5388887642579836888618998034566786466667786245646874764745650379876307981464334
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 844567899997999999999999742
Q gi|254780283|r 290 ERYRQAITAAAMGCMAALEVEHYLSIH 316 (321)
Q Consensus 290 ~~~~~~~~A~~~G~~Aa~~i~~yl~~~ 316 (321)
T Consensus 389 HGi--g~pdLsl~a~Raa~I~~~L~g~ 413 (436)
T COG3486 389 HGI--GAPDLSLGAWRAAVILNSLLGR 413 (436)
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHHCC
T ss_conf 666--7754027999999999987376