HHsearch alignment for GI: 254780283 and conserved domain: PRK05714
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=99.23 E-value=9.7e-11 Score=81.28 Aligned_cols=113 Identities=15% Similarity=0.289 Sum_probs=74.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-----CC------EEE-------------------------EECC
Q ss_conf 75199998977799999999986995999967887-----75------687-------------------------5010
Q gi|254780283|r 5 DSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDL-----GG------QLM-------------------------ITES 48 (321)
Q Consensus 5 ~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~-----GG------~l~-------------------------~~~~ 48 (321)
T Consensus 2 ~~DV~IvGaGpvGl~lAl~L~~~G~~v~lie~~~~~~~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~l~~~~~~p~~~ 81 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALEGSGLEVLLVDGGPLSVKPFDPQAPFEPRVSALSAASQRILERLGAWDGIAARRASPYSD 81 (405)
T ss_pred CCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHCCCCEEE
T ss_conf 98899999059999999999618997899958997778776677898425567799899999879816568735776124
Q ss_pred CCCC-------CCCCCC----------CCHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 0787-------747777----------897899986643232002322211-3320112222222222222222100001
Q gi|254780283|r 49 IENY-------PGFATS----------IRGDWLMEQMRQQAENFGTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADAVV 110 (321)
Q Consensus 49 i~n~-------~g~~~~----------~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~lI 110 (321)
T Consensus 82 ~~v~d~~~~~~~~f~~~~~~~~~lg~vv~~~~l~~~L~~~l~~~~v~~~~~~~v~~~~~~~~~~~v~l~~g~~i~a~llV 161 (405)
T PRK05714 82 MQVWDGSGTGQIHFSAASVHAEVLGHIVENRVVQDALLERLHDSDIGLLANARLEQMRRSGDDWLLTLADGRQLRAPLVV 161 (405)
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCEEECCEEE
T ss_conf 55205898622764410147644411232699999999999727988984878999998388079996799798638899
Q ss_pred CCCCCCC
Q ss_conf 4776642
Q gi|254780283|r 111 IATGSEV 117 (321)
Q Consensus 111 iAtG~~~ 117 (321)
T Consensus 162 gADG~~S 168 (405)
T PRK05714 162 AADGANS 168 (405)
T ss_pred ECCCCCC
T ss_conf 9589985