HHsearch alignment for GI: 254780283 and conserved domain: PRK08849
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=99.23 E-value=5.4e-11 Score=82.79 Aligned_cols=114 Identities=19% Similarity=0.275 Sum_probs=70.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC---------CCEEE-EE------------------------CCC
Q ss_conf 675199998977799999999986995999967887---------75687-50------------------------100
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDL---------GGQLM-IT------------------------ESI 49 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~---------GG~l~-~~------------------------~~i 49 (321)
T Consensus 2 ~~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~~p~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~i~~~~~~~~~~~ 81 (384)
T PRK08849 2 NKYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGFEPKAFEASQPMDIRVSAISQNSVDLLESLGAWSSIVAMRVCPYKRL 81 (384)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEE
T ss_conf 81899999924999999999995799599996899876666678770567867999999998798646876147860025
Q ss_pred CCC--CC----CC-CCC---------CHHHHHHHHHHHHHHC-CCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 787--74----77-778---------9789998664323200-2322211-33201122222222222222221000014
Q gi|254780283|r 50 ENY--PG----FA-TSI---------RGDWLMEQMRQQAENF-GTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADAVVI 111 (321)
Q Consensus 50 ~n~--~g----~~-~~~---------~~~~l~~~~~~~~~~~-~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~lIi 111 (321)
T Consensus 82 ~~~~~~~~~~~f~~~~~~~~~lg~iv~~~~l~~~L~~~~~~~~~i~~~~~~~v~~~~~~~~~~~v~l~~g~~i~a~llIg 161 (384)
T PRK08849 82 ETWEHPECRTRFHSDELNLDQLGYIVENRLIQLGLWQQFAQYPNLTLLCPEKLKDLEFSAEGNRVTLESGAEIEAKWVIG 161 (384)
T ss_pred EEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCEEEEEECCCCEEEEEEEEE
T ss_conf 53017764412485343863000034379999999999984899199838778898853881499978999998547999
Q ss_pred CCCCCC
Q ss_conf 776642
Q gi|254780283|r 112 ATGSEV 117 (321)
Q Consensus 112 AtG~~~ 117 (321)
T Consensus 162 ADG~~S 167 (384)
T PRK08849 162 ADGANS 167 (384)
T ss_pred EECCCH
T ss_conf 207864