HHsearch alignment for GI: 254780283 and conserved domain: PRK08849

>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=99.23  E-value=5.4e-11  Score=82.79  Aligned_cols=114  Identities=19%  Similarity=0.275  Sum_probs=70.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC---------CCEEE-EE------------------------CCC
Q ss_conf             675199998977799999999986995999967887---------75687-50------------------------100
Q gi|254780283|r    4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDL---------GGQLM-IT------------------------ESI   49 (321)
Q Consensus         4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~---------GG~l~-~~------------------------~~i   49 (321)
T Consensus         2 ~~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~~p~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~i~~~~~~~~~~~   81 (384)
T PRK08849          2 NKYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGFEPKAFEASQPMDIRVSAISQNSVDLLESLGAWSSIVAMRVCPYKRL   81 (384)
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEE
T ss_conf             81899999924999999999995799599996899876666678770567867999999998798646876147860025


Q ss_pred             CCC--CC----CC-CCC---------CHHHHHHHHHHHHHHC-CCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf             787--74----77-778---------9789998664323200-2322211-33201122222222222222221000014
Q gi|254780283|r   50 ENY--PG----FA-TSI---------RGDWLMEQMRQQAENF-GTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADAVVI  111 (321)
Q Consensus        50 ~n~--~g----~~-~~~---------~~~~l~~~~~~~~~~~-~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~lIi  111 (321)
T Consensus        82 ~~~~~~~~~~~f~~~~~~~~~lg~iv~~~~l~~~L~~~~~~~~~i~~~~~~~v~~~~~~~~~~~v~l~~g~~i~a~llIg  161 (384)
T PRK08849         82 ETWEHPECRTRFHSDELNLDQLGYIVENRLIQLGLWQQFAQYPNLTLLCPEKLKDLEFSAEGNRVTLESGAEIEAKWVIG  161 (384)
T ss_pred             EEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCEEEEEECCCCEEEEEEEEE
T ss_conf             53017764412485343863000034379999999999984899199838778898853881499978999998547999


Q ss_pred             CCCCCC
Q ss_conf             776642
Q gi|254780283|r  112 ATGSEV  117 (321)
Q Consensus       112 AtG~~~  117 (321)
T Consensus       162 ADG~~S  167 (384)
T PRK08849        162 ADGANS  167 (384)
T ss_pred             EECCCH
T ss_conf             207864